Mock Version: 1.4.21
Mock Version: 1.4.21
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/lammps.spec'], chrootPath='/var/lib/mock/f33-build-344902-59206/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fac266700>timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target riscv64 --nodeps /builddir/build/SPECS/lammps.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1603996647
Wrote: /builddir/build/SRPMS/lammps-20201029-1.fc33.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/lammps.spec'], chrootPath='/var/lib/mock/f33-build-344902-59206/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fac266700>timeout=432000uid=987gid=135user='mockbuild'nspawn_args=[]unshare_net=TrueprintOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target riscv64 --nodeps /builddir/build/SPECS/lammps.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Building target platforms: riscv64
Building for target riscv64
setting SOURCE_DATE_EPOCH=1603996647
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.gDcZ30
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf lammps-patch_29Oct2020
+ /usr/bin/gzip -dc /builddir/build/SOURCES/lammps-patch_29Oct2020.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd lammps-patch_29Oct2020
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.IyN6t0
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_29Oct2020
+ . /etc/profile.d/modules.sh
++ . /etc/profile.d/00-modulepath.sh
+++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']'
+++ :
++ '[' -z '' ']'
++ '[' -z /usr/share/modulefiles ']'
++ findExec PS_CMD /usr/bin/ps ps
++ Nm=PS_CMD
++ confPath=/usr/bin/ps
++ execNm=ps
++ eval PS_CMD=/usr/bin/ps
+++ PS_CMD=/usr/bin/ps
++ '[' '!' -x /usr/bin/ps ']'
++ unset Nm confPath execNm
++ findExec EXPR_CMD /usr/bin/expr expr
++ Nm=EXPR_CMD
++ confPath=/usr/bin/expr
++ execNm=expr
++ eval EXPR_CMD=/usr/bin/expr
+++ EXPR_CMD=/usr/bin/expr
++ '[' '!' -x /usr/bin/expr ']'
++ unset Nm confPath execNm
++ findExec BASENAME_CMD /usr/bin/basename basename
++ Nm=BASENAME_CMD
++ confPath=/usr/bin/basename
++ execNm=basename
++ eval BASENAME_CMD=/usr/bin/basename
+++ BASENAME_CMD=/usr/bin/basename
++ '[' '!' -x /usr/bin/basename ']'
++ unset Nm confPath execNm
++ unset -f findExec
+++ /usr/bin/ps -p 28244 -ocomm=
++ my_shell=sh
+++ /usr/bin/expr sh : '-*\(.*\)'
++ my_shell=sh
+++ /usr/bin/basename sh
++ my_shell=sh
++ '[' -f /usr/share/lmod/lmod/init/sh ']'
++ . /usr/share/lmod/lmod/init/sh
+++ LMOD_ROOT=/usr/share/lmod
+++ LMOD_PKG=/usr/share/lmod/lmod
+++ LMOD_DIR=/usr/share/lmod/lmod/libexec/
+++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
+++ MODULESHOME=/usr/share/lmod/lmod
+++ export LMOD_CMD
+++ export LMOD_PKG
+++ export LMOD_DIR
+++ export MODULESHOME
+++ export LMOD_DIR
++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT
+ for mpi in '' mpich openmpi
+ test -n ''
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
++ test -z ''
++ echo -DBUILD_MPI=OFF -DPKG_MPIIO=OFF -DBUILD_LAMMPS_SHELL=ON -DBUILD_TOOLS=ON
+ /usr/bin/cmake -S cmake -B serial -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -C cmake/presets/all_on.cmake -C cmake/presets/nolib.cmake -DBLAS_LIBRARIES=-lflexiblas -DLAPACK_LIBRARIES=-lflexiblas -DCMAKE_TUNE_FLAGS= -DCMAKE_CUSTOM_LINKER=default -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DENABLE_TESTING=ON -DGTEST_URL=/builddir/build/SOURCES/release-1.10.0.tar.gz -DPYTHON_INSTDIR=/usr/lib/python3.9/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64 -DLAMMPS_MACHINE= -DLAMMPS_LIB_SUFFIX= -DCMAKE_INSTALL_MANDIR=/usr/share/man -DBUILD_MPI=OFF -DPKG_MPIIO=OFF -DBUILD_LAMMPS_SHELL=ON -DBUILD_TOOLS=ON
loading initial cache file cmake/presets/all_on.cmake
loading initial cache file cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 10.2.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- The C compiler identification is GNU 10.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Found BLAS: -lflexiblas  
-- A library with LAPACK API found.
-- Found JPEG: /usr/lib64/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib64/libpng.so (found version "1.6.37") 
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.7.3") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.8
-- Found FFTW3: /usr/lib64/libfftw3.so  
-- Found Python: /usr/include/python3.9 (found version "3.9.0") found components: Development Development.Module Development.Embed 
-- Found VORO: /usr/lib64/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.1.3'
--   Found libkim-api, version 2.1.3
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- Found HDF5: /usr/lib64/libhdf5.so (found version "1.10.6")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib64/libOpenCL.so (found version "2.2") 
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/atom_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/beck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/born_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/born_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/born_coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/born_coul_wolf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/born_coul_wolf_cs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/buck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/buck_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/buck_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/charmm_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/coul_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/device_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/dipole_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/dipole_lj_sf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/dipole_long_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/dpd_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/eam_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/ellipsoid_nbor_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/gauss_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj96_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_class2_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_coul_msm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_cubic_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_expand_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_expand_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_gromacs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_sdk_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_sdk_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/lj_tip4p_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/mie_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/morse_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/neighbor_cpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/neighbor_gpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/pppm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/soft_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/sw_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/table_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/ufm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/vashishta_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/yukawa_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/yukawa_colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/gayberne_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/gayberne_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu/tersoff_mod_cl.h...
-- Generating style headers...
-- Generating package headers...
-- Generating lmpinstalledpkgs.h...
-- Looking for a Fortran compiler
-- Looking for a Fortran compiler - /usr/bin/f95
-- The Fortran compiler identification is GNU 10.2.1
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/bin/f95 - skipped
-- Checking whether /usr/bin/f95 supports Fortran 90
-- Checking whether /usr/bin/f95 supports Fortran 90 - yes
-- Checking for module 'readline'
--   Found readline, version 8.0
-- Found Python: /usr/bin/python3.9 (found version "3.9.0") found components: Interpreter 
-- Performing Test HAVE_LLD_LINKER_FLAG
-- Performing Test HAVE_LLD_LINKER_FLAG - Success
-- Performing Test HAVE_GOLD_LINKER_FLAG
-- Performing Test HAVE_GOLD_LINKER_FLAG - Success
-- Performing Test HAVE_BFD_LINKER_FLAG
-- Performing Test HAVE_BFD_LINKER_FLAG - Success
-- Downloading and building Google Test library
-- Found Python3: /usr/bin/python3.9 (found version "3.9.0") found components: Interpreter 
-- Could NOT find YAML (missing: YAML_LIBRARY YAML_INCLUDE_DIR) 
-- Skipping tests because libyaml is not found
-- Could NOT find ClangFormat (missing: ClangFormat_EXECUTABLE) (Required is at least version "8.0")
-- The following tools and libraries have been found and configured:
 * OpenMP
 * LAPACK
 * BLAS
 * JPEG
 * PNG
 * ZLIB
 * FFTW3
 * VORO
 * HDF5
 * OpenCL
 * PkgConfig
 * Python
-- <<< Build configuration >>>
   Operating System: Linux
   Build type:       
   Install path:     /usr
   Generator:        Unix Makefiles using /usr/bin/gmake
-- Enabled packages: ASPHERE;BODY;CLASS2;COLLOID;CORESHELL;DIPOLE;GPU;GRANULAR;KIM;KSPACE;MANYBODY;MC;MESSAGE;MISC;MLIAP;MOLECULE;OPT;PERI;POEMS;PYTHON;QEQ;REPLICA;RIGID;SHOCK;SNAP;SPIN;SRD;USER-ATC;USER-BOCS;USER-CGDNA;USER-CGSDK;USER-COLVARS;USER-DIFFRACTION;USER-DPD;USER-DRUDE;USER-EFF;USER-FEP;USER-H5MD;USER-MANIFOLD;USER-MEAMC;USER-MESODPD;USER-MGPT;USER-MISC;USER-MOFFF;USER-OMP;USER-PHONON;USER-PTM;USER-QTB;USER-REACTION;USER-REAXC;USER-SDPD;USER-SMTBQ;USER-SPH;USER-TALLY;USER-UEF;USER-YAFF;VORONOI
-- <<< Compilers and Flags: >>>
-- C++ Compiler:     /usr/bin/g++
      Type:          GNU
      Version:       10.2.1
      C++ Flags:    -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection 
      Defines:       LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;LAMMPS_EXCEPTIONS;LAMMPS_OMP_COMPAT=4;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;FFT_FFTW3;FFT_FFTW_THREADS;LMP_PYTHON;LMP_USER_OMP
-- Fortran Compiler: /usr/bin/f95
      Type:          GNU
      Version:       10.2.1
      Fortran Flags:-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules 
-- C compiler:       /usr/bin/gcc
      Type:          GNU
      Version:       10.2.1
      C Flags:      -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection 
-- <<< Linker flags: >>>
-- Executable name:  lmp
-- Executable linker flags: -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld
-- Shared library flags:    -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld
-- <<< GPU package settings >>>
-- GPU API:          OPENCL
-- OpenCL tuning:    GENERIC
-- GPU precision:    MIXED
-- <<< FFT settings >>>
-- Primary FFT lib:  FFTW3
-- Using double precision FFTs
-- Using threaded FFTs
-- <<< Building Tools >>>
-- <<< Building LAMMPS Shell >>>
-- <<< Building Unit Tests >>>
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    INCLUDE_INSTALL_DIR
    LAMMPS_LIB_SUFFIX
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-patch_29Oct2020/serial
+ /usr/bin/cmake --build serial -j4 --verbose
/usr/bin/cmake -S/builddir/build/BUILD/lammps-patch_29Oct2020/cmake -B/builddir/build/BUILD/lammps-patch_29Oct2020/serial --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles /builddir/build/BUILD/lammps-patch_29Oct2020/serial//CMakeFiles/progress.marks
/usr/bin/gmake  -f CMakeFiles/Makefile2 all
gmake[1]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f CMakeFiles/variable.h.dir/build.make CMakeFiles/variable.h.dir/depend
/usr/bin/gmake  -f CMakeFiles/group.h.dir/build.make CMakeFiles/group.h.dir/depend
/usr/bin/gmake  -f CMakeFiles/error.h.dir/build.make CMakeFiles/error.h.dir/depend
/usr/bin/gmake  -f CMakeFiles/lammps.h.dir/build.make CMakeFiles/lammps.h.dir/depend
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Scanning dependencies of target h5md
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/usr/bin/gcc  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -o CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/src/ch5md.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/src/ch5md.c
[  3%] Building CXX object CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp.o
/usr/bin/g++ -DLEPTON_BUILDING_STATIC_LIBRARY -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp
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In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/cslib.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
   92 | static void MPI_Finalize() {}
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
      |             ^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
   59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   56 | static void MPI_Comm_free(MPI_Comm *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
   49 | static void MPI_Close_port(const char *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
   48 | static void MPI_Open_port(MPI_Info, char *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
      |                 ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
   43 | static void MPI_Init(int *, char ***) {}
      |             ^~~~~~~~
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[  3%] Generating includes/lammps/angle.h
/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/angle.h /builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes/lammps/angle.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[  3%] Built target angle.h
[  3%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/cslib_wrap.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/cslib_wrap.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/cslib_wrap.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/cslib_wrap.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
   92 | static void MPI_Finalize() {}
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
   91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
      |             ^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
      |             ^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
   59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   56 | static void MPI_Comm_free(MPI_Comm *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
   49 | static void MPI_Close_port(const char *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
   48 | static void MPI_Open_port(MPI_Info, char *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
   46 | static void MPI_Comm_size(MPI_Comm, int *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
   45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
   43 | static void MPI_Init(int *, char ***) {}
      |             ^~~~~~~~
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[  3%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg.cpp
[  3%] Building C object CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS/mpi.c.o
/usr/bin/gcc  -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -o CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS/mpi.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS/mpi.c
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
   92 | static void MPI_Finalize() {}
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:73:13: warning: 'void CSLIB_NS::MPI_Bcast(void*, int, CSLIB_NS::MPI_Datatype, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   73 | static void MPI_Bcast(void *, int, MPI_Datatype, int, MPI_Comm) {}
      |             ^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
   59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   56 | static void MPI_Comm_free(MPI_Comm *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
   49 | static void MPI_Close_port(const char *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
   48 | static void MPI_Open_port(MPI_Info, char *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
      |                 ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
   43 | static void MPI_Init(int *, char ***) {}
      |             ^~~~~~~~
[  3%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp: In member function 'virtual void CSLIB_NS::MsgFile::recv(int&, int*&, int&, char*&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp:125:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  125 |   if (me == 0) fread(lengths,sizeof(int),2,fp);
      |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp:132:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  132 |   if (me == 0) fread(header,sizeof(int),nheader,fp);
      |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp:135:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  135 |   if (me == 0) fread(buf,1,nbuf,fp);
      |                ~~~~~^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
   92 | static void MPI_Finalize() {}
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
   91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
      |             ^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
   59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   56 | static void MPI_Comm_free(MPI_Comm *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
   49 | static void MPI_Close_port(const char *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
   48 | static void MPI_Open_port(MPI_Info, char *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
   46 | static void MPI_Comm_size(MPI_Comm, int *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
   45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
      |                 ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
   43 | static void MPI_Init(int *, char ***) {}
      |             ^~~~~~~~
[  3%] Linking C static library liblammps_mpi_stubs.a
/usr/bin/cmake -P CMakeFiles/mpi_stubs.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/mpi_stubs.dir/link.txt --verbose=1
/usr/bin/ar qc liblammps_mpi_stubs.a CMakeFiles/mpi_stubs.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS/mpi.c.o
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'void Lepton::CompiledExpression::compileExpression(const Lepton::ExpressionTreeNode&, std::vector<std::pair<Lepton::ExpressionTreeNode, int> >&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:91:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   91 |     for (int i = 0; i < node.getChildren().size(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/ranlib liblammps_mpi_stubs.a
[  3%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_one.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_one.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_one.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:113:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  113 |             for (int i = 1; i < args.size(); i++)
      |                             ~~^~~~~~~~~~~~~
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'double Lepton::CompiledExpression::evaluate() const':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:170:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<double*, double*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  170 |     for (int i = 0; i < variablesToCopy.size(); i++)
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
[  3%] Built target mpi_stubs
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:175:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::Operation*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  175 |     for (int step = 0; step < operation.size(); step++) {
      |                        ~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:180:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  180 |             for (int i = 0; i < args.size(); i++)
      |                             ~~^~~~~~~~~~~~~
[  3%] Building CXX object CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionProgram.cpp.o
/usr/bin/g++ -DLEPTON_BUILDING_STATIC_LIBRARY -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionProgram.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionProgram.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_one.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
   92 | static void MPI_Finalize() {}
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
   91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
      |             ^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   56 | static void MPI_Comm_free(MPI_Comm *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
   49 | static void MPI_Close_port(const char *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
   48 | static void MPI_Open_port(MPI_Info, char *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
   45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
      |                 ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
   43 | static void MPI_Init(int *, char ***) {}
      |             ^~~~~~~~
[  3%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_two.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_two.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_two.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_two.cpp: In member function 'void CSLIB_NS::MsgMPITwo::init(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_two.cpp:60:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   60 |       fgets(port,MPI_MAX_PORT_NAME,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_two.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h: At global scope:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
   92 | static void MPI_Finalize() {}
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
   91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
      |             ^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
   59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
   46 | static void MPI_Comm_size(MPI_Comm, int *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
   45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
      |                 ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
   43 | static void MPI_Init(int *, char ***) {}
      |             ^~~~~~~~
[  3%] Building CXX object CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_zmq.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_NO -DZMQ_NO -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_zmq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_zmq.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_zmq.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:92:13: warning: 'void CSLIB_NS::MPI_Finalize()' defined but not used [-Wunused-function]
   92 | static void MPI_Finalize() {}
      |             ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:91:13: warning: 'void CSLIB_NS::MPI_Abort(CSLIB_NS::MPI_Comm, int)' defined but not used [-Wunused-function]
   91 | static void MPI_Abort(MPI_Comm, int) {exit(1);}
      |             ^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:80:13: warning: 'void CSLIB_NS::MPI_Allgatherv(const void*, int, CSLIB_NS::MPI_Datatype, void*, const int*, const int*, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   80 | static void MPI_Allgatherv(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:74:13: warning: 'void CSLIB_NS::MPI_Allgather(const void*, int, CSLIB_NS::MPI_Datatype, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   74 | static void MPI_Allgather(const void *in, int incount, MPI_Datatype intype,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:67:13: warning: 'void CSLIB_NS::MPI_Scan(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   67 | static void MPI_Scan(const void *in, void *out, int, MPI_Datatype intype,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:62:13: warning: 'void CSLIB_NS::MPI_Allreduce(const void*, void*, int, CSLIB_NS::MPI_Datatype, CSLIB_NS::MPI_Op, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   62 | static void MPI_Allreduce(const void *in, void *out, int, MPI_Datatype type,
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:59:13: warning: 'void CSLIB_NS::MPI_Recv(void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Status*)' defined but not used [-Wunused-function]
   59 | static void MPI_Recv(void *, int, MPI_Datatype, int, int,
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:58:13: warning: 'void CSLIB_NS::MPI_Send(const void*, int, CSLIB_NS::MPI_Datatype, int, int, CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   58 | static void MPI_Send(const void *, int, MPI_Datatype, int, int, MPI_Comm) {}
      |             ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:56:13: warning: 'void CSLIB_NS::MPI_Comm_free(CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   56 | static void MPI_Comm_free(MPI_Comm *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:55:13: warning: 'void CSLIB_NS::MPI_Comm_split(CSLIB_NS::MPI_Comm, int, int, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   55 | static void MPI_Comm_split(MPI_Comm, int, int, MPI_Comm *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:52:13: warning: 'void CSLIB_NS::MPI_Comm_connect(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   52 | static void MPI_Comm_connect(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:50:13: warning: 'void CSLIB_NS::MPI_Comm_accept(const char*, CSLIB_NS::MPI_Info, int, CSLIB_NS::MPI_Comm, CSLIB_NS::MPI_Comm*)' defined but not used [-Wunused-function]
   50 | static void MPI_Comm_accept(const char *, MPI_Info, int,
      |             ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:49:13: warning: 'void CSLIB_NS::MPI_Close_port(const char*)' defined but not used [-Wunused-function]
   49 | static void MPI_Close_port(const char *) {}
      |             ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:48:13: warning: 'void CSLIB_NS::MPI_Open_port(CSLIB_NS::MPI_Info, char*)' defined but not used [-Wunused-function]
   48 | static void MPI_Open_port(MPI_Info, char *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:46:13: warning: 'void CSLIB_NS::MPI_Comm_size(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
   46 | static void MPI_Comm_size(MPI_Comm, int *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:45:13: warning: 'void CSLIB_NS::MPI_Comm_rank(CSLIB_NS::MPI_Comm, int*)' defined but not used [-Wunused-function]
   45 | static void MPI_Comm_rank(MPI_Comm, int *) {}
      |             ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:44:17: warning: 'CSLIB_NS::MPI_Comm CSLIB_NS::MPI_Comm_f2c(CSLIB_NS::MPI_Comm)' defined but not used [-Wunused-function]
   44 | static MPI_Comm MPI_Comm_f2c(MPI_Comm world) {return world;}
      |                 ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_MPI/mpi_dummy.h:43:13: warning: 'void CSLIB_NS::MPI_Init(int*, char***)' defined but not used [-Wunused-function]
   43 | static void MPI_Init(int *, char ***) {}
      |             ^~~~~~~~
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/usr/bin/g++ -DLEPTON_BUILDING_STATIC_LIBRARY -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const std::vector<Lepton::ExpressionTreeNode>&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:40:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   40 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   47 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   53 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   58 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DLEPTON_BUILDING_STATIC_LIBRARY -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:181:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  181 |             if (pos != tokens.size())
      |                 ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:190:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  190 |         if (pos != tokens.size())
      |             ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::__cxx11::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:201:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  201 |     if (pos == tokens.size())
      |         ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:227:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  227 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
      |             ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:241:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  241 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
      |             ~~~~^~~~~~~~~~~~~~~~
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[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp
[  3%] Linking CXX static library liblammps_lepton.a
/usr/bin/cmake -P CMakeFiles/lepton.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/lepton.dir/link.txt --verbose=1
/usr/bin/ar qc liblammps_lepton.a CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp.o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionProgram.cpp.o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Operation.cpp.o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ParsedExpression.cpp.o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp.o
/usr/bin/ranlib liblammps_lepton.a
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[  3%] Built target lepton
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_histogram.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_histogram.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_histogram.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_meta.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_meta.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_meta.cpp
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_restraint.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_restraint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_restraint.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp
[  3%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
/usr/bin/gmake  -f CMakeFiles/pair.h.dir/build.make CMakeFiles/pair.h.dir/depend
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/pair.h.dir/depend.internal".
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.h /builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes/lammps/pair.h
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[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/exceptions.h /builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes/lammps/exceptions.h
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/usr/bin/gmake  -f CMakeFiles/pointers.h.dir/build.make CMakeFiles/pointers.h.dir/depend
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/pointers.h.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/pointers.h.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/pointers.h.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/pointers.h.dir/depend.internal".
Scanning dependencies of target pointers.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f CMakeFiles/pointers.h.dir/build.make CMakeFiles/pointers.h.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h /builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes/lammps/pointers.h
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/usr/bin/gmake  -f CMakeFiles/region.h.dir/build.make CMakeFiles/region.h.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/region.h.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/region.h.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/region.h.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/region.h.dir/depend.internal".
Scanning dependencies of target region.h
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/usr/bin/gmake  -f CMakeFiles/region.h.dir/build.make CMakeFiles/region.h.dir/build
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[  4%] Generating includes/lammps/region.h
/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/region.h /builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes/lammps/region.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[  4%] Built target region.h
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp
/usr/bin/gmake  -f CMakeFiles/fix.h.dir/build.make CMakeFiles/fix.h.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/fix.h.dir/depend.internal".
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h /builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes/lammps/fix.h
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[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp
/usr/bin/gmake  -f CMakeFiles/timer.h.dir/build.make CMakeFiles/timer.h.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/timer.h.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/timer.h.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/timer.h.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/timer.h.dir/depend.internal".
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gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/timer.h /builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes/lammps/timer.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[  4%] Built target timer.h
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp
/usr/bin/gmake  -f CMakeFiles/update.h.dir/build.make CMakeFiles/update.h.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/update.h.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/update.h.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/update.h.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/update.h.dir/depend.internal".
Scanning dependencies of target update.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f CMakeFiles/update.h.dir/build.make CMakeFiles/update.h.dir/build
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/update.h /builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes/lammps/update.h
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/usr/bin/gmake  -f CMakeFiles/utils.h.dir/build.make CMakeFiles/utils.h.dir/depend
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/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp
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/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp
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[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp
[  5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp
/usr/bin/gmake  -f CMakeFiles/modify.h.dir/build.make CMakeFiles/modify.h.dir/depend
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[  5%] Built target modify.h
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat4x4.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat4x4.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat4x4.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat6x6.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat6x6.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat6x6.cpp
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrix.cpp
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrixfun.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrixfun.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrixfun.cpp
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mixedjoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mixedjoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mixedjoint.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/norm.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/norm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/norm.cpp
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onbody.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onbody.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onbody.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp
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/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.h:36:13: warning: 'TreeNode::data' will be initialized after [-Wreorder]
   36 |         int data;
      |             ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.h:32:19: warning:   'TreeNode* TreeNode::left' [-Wreorder]
   32 |         TreeNode *left;
      |                   ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
   22 | TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
      | ^~~~~~~~
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp
/usr/bin/gmake  -f CMakeFiles/binary2txt.dir/build.make CMakeFiles/binary2txt.dir/depend
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/binary2txt.dir/depend.internal".
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[  8%] Building CXX object CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/binary2txt.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp: In function 'int main(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:104:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  104 |       fread(&ntimestep,sizeof(bigint),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:121:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  121 |         fread(magic_string, sizeof(char), magic_string_len, fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:125:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  125 |         fread(&endian, sizeof(int), 1, fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:128:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  128 |         fread(&revision, sizeof(int), 1, fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:131:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  131 |         fread(&ntimestep,sizeof(bigint),1,fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:134:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  134 |       fread(&natoms,sizeof(bigint),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:135:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  135 |       fread(&triclinic,sizeof(int),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:136:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  136 |       fread(&boundary[0][0],6*sizeof(int),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:137:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  137 |       fread(&xlo,sizeof(double),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:138:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  138 |       fread(&xhi,sizeof(double),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:139:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  139 |       fread(&ylo,sizeof(double),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:140:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  140 |       fread(&yhi,sizeof(double),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:141:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  141 |       fread(&zlo,sizeof(double),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:142:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  142 |       fread(&zhi,sizeof(double),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:144:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  144 |         fread(&xy,sizeof(double),1,fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:145:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  145 |         fread(&xz,sizeof(double),1,fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:146:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  146 |         fread(&yz,sizeof(double),1,fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:148:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  148 |       fread(&size_one,sizeof(int),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:154:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  154 |         fread(&len, sizeof(int), 1, fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:160:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  160 |           fread(unit_style, sizeof(char), len, fp);
      |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:167:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  167 |         fread(&flag, sizeof(char), 1, fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:171:16: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  171 |           fread(&time, sizeof(double), 1, fp);
      |           ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:175:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  175 |         fread(&len, sizeof(int), 1, fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:178:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  178 |         fread(columns, sizeof(char), len, fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:182:12: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  182 |       fread(&nchunk,sizeof(int),1,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:221:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  221 |         fread(&n,sizeof(int),1,fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/binary2txt.cpp:233:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  233 |         fread(buf,sizeof(double),n,fp);
      |         ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
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In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp:25:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
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  384 |   cl_context_properties props[3];
      |                         ^~~~~
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/usr/bin/f95   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIE -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/chain.f -o CMakeFiles/chain.x.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/chain.f.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/tools/chain.f: Warning: -D_FORTIFY_SOURCE not defined
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/tools/chain.f: Warning: -D_GLIBCXX_ASSERTIONS not defined
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  318 |       iseed = sseed
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   97 |           x2 = xboundlo + random(iseed)*xprd
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/builddir/build/BUILD/lammps-patch_29Oct2020/tools/chain.f:98:15:
   98 |           y2 = yboundlo + random(iseed)*yprd
      |               1
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   99 |           z2 = zboundlo + random(iseed)*zprd
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/builddir/build/BUILD/lammps-patch_29Oct2020/tools/chain.f:132:21:
  132 |  10         xinner = 2.0*random(iseed) - 1.0
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  133 |             yinner = 2.0*random(iseed) - 1.0
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  134 |             zinner = 2.0*random(iseed) - 1.0
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  147 |             x2 = x1 + xsurf*bondlength(iset)
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  148 |             y2 = y1 + ysurf*bondlength(iset)
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/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp
/usr/bin/gmake  -f CMakeFiles/msi2lmp.dir/build.make CMakeFiles/msi2lmp.dir/depend
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/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/CheckLists.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/CheckLists.c
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/usr/bin/ranlib liblammps_poems.a
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[ 11%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c.o
/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c
[ 11%] Built target poems
[ 11%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/InitializeItems.c.o
/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/InitializeItems.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/InitializeItems.c
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp
[ 11%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/MakeLists.c.o
/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/MakeLists.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/MakeLists.c
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp
In file included from /usr/include/string.h:519,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c:5:
In function 'strncpy',
    inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c:1026:5:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'find_angleangle_data.isra.0' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c:1052:5:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c:994:3:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'find_trigonal_body_data.isra.0' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c:1008:3:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c:864:3:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'find_improper_body_data.isra.0' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c:881:3:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' specified bound 5 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:519,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/MakeLists.c:5:
In function 'strncpy',
    inlined from 'build_atomtypes_list' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/MakeLists.c:479:3,
    inlined from 'MakeLists' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/MakeLists.c:46:3:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' output may be truncated copying 5 bytes from a string of length 5 [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'build_atomtypes_list' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/MakeLists.c:500:7,
    inlined from 'MakeLists' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/MakeLists.c:46:3:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' output may be truncated copying 5 bytes from a string of length 5 [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 11%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c.o
/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c: In function 'ReadCarFile':
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:101:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  101 |   fgets(line,MAX_LINE_LENGTH,CarF); /* Read header line */
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:108:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  108 |     fgets(line,MAX_LINE_LENGTH,CarF); /* Comment line */
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:109:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  109 |     fgets(line,MAX_LINE_LENGTH,CarF); /* Date stamp */
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:110:5: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
  110 |     fscanf(CarF,"%*s %lf %lf %lf %lf %lf %lf %*s",
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  111 |            &pbc[0],&pbc[1],&pbc[2],&pbc[3],&pbc[4],&pbc[5]);
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:124:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  124 |     fgets(line,MAX_LINE_LENGTH, CarF); /* Comment line */
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:125:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  125 |     fgets(line,MAX_LINE_LENGTH, CarF); /* Date Stamp */
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:146:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  146 |     fgets(line,MAX_LINE_LENGTH,CarF);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:180:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  180 |     fgets(line,MAX_LINE_LENGTH,CarF);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:189:7: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result]
  189 |       fscanf(CarF,"%s %lf %lf %lf %*s %d %s %s %lf",
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  190 |              atoms[k].name,
      |              ~~~~~~~~~~~~~~
  191 |              &(atoms[k].x[0]),
      |              ~~~~~~~~~~~~~~~~~
  192 |              &(atoms[k].x[1]),
      |              ~~~~~~~~~~~~~~~~~
  193 |              &(atoms[k].x[2]),
      |              ~~~~~~~~~~~~~~~~~
  194 |              &(atoms[k].molecule),
      |              ~~~~~~~~~~~~~~~~~~~~~
  195 |              atoms[k].potential,
      |              ~~~~~~~~~~~~~~~~~~~
  196 |              atoms[k].element,
      |              ~~~~~~~~~~~~~~~~~
  197 |              &(atoms[k].q));
      |              ~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:209:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  209 |     fgets(line,MAX_LINE_LENGTH,CarF);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:210:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  210 |     fgets(line,MAX_LINE_LENGTH,CarF);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 11%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadFrcFile.c.o
/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadFrcFile.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadFrcFile.c
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp
[ 11%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadMdfFile.c.o
/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadMdfFile.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadMdfFile.c
In file included from /usr/include/string.h:519,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadMdfFile.c:12:
In function 'strncpy',
    inlined from 'ReadMdfFile' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadMdfFile.c:148:9:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' specified bound 16 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'ReadMdfFile' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadMdfFile.c:174:11:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' specified bound 64 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 11%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c.o
/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c: In function 'SearchAndFill':
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c:114:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  114 |     fgets(line, MAX_LINE_LENGTH, FrcF);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c:119:3: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  119 |   fgets(line, MAX_LINE_LENGTH, FrcF);
      |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c:121:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  121 |     fgets( line, MAX_LINE_LENGTH, FrcF);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c:223:5: warning: ignoring return value of 'fgets' declared with attribute 'warn_unused_result' [-Wunused-result]
  223 |     fgets( line, MAX_LINE_LENGTH, FrcF);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:519,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c:13:
In function 'strncpy',
    inlined from 'SearchAndFill' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c:198:11:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' output may be truncated copying 5 bytes from a string of length 24 [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
    inlined from 'SearchAndFill' at /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c:216:9:
/usr/include/bits/string_fortified.h:91:10: warning: 'strncpy' output may be truncated copying 5 bytes from a string of length 24 [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 11%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/WriteDataFile.c.o
/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/WriteDataFile.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/WriteDataFile.c
[ 11%] Building C object CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/msi2lmp.c.o
/usr/bin/gcc   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/msi2lmp.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/msi2lmp.c
[ 11%] Linking C executable msi2lmp
/usr/bin/cmake -E cmake_link_script CMakeFiles/msi2lmp.dir/link.txt --verbose=1
/usr/bin/gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/CheckLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/GetParameters.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/InitializeItems.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/MakeLists.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadFrcFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadMdfFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/SearchAndFill.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/WriteDataFile.c.o CMakeFiles/msi2lmp.dir/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/msi2lmp.c.o -o msi2lmp  -lm 
/usr/bin/gmake  -f unittest/CMakeFiles/googletest.dir/build.make unittest/CMakeFiles/googletest.dir/depend
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/CMakeFiles/googletest.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/googletest-prefix/src/googletest-stamp
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[ 12%] Performing configure step for 'googletest'
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/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c: In function 'ReadCarFile':
/builddir/build/BUILD/lammps-patch_29Oct2020/tools/msi2lmp/src/ReadCarFile.c:155:38: warning: argument 1 range [18446744071562067968, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
  155 |   molecule = (struct MoleculeList *) calloc(no_molecules,
      |                                      ^
/usr/include/stdlib.h:542:14: note: in a call to allocation function 'calloc' declared here
  542 | extern void *calloc (size_t __nmemb, size_t __size)
      |              ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp.o
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-- googletest configure command succeeded.  See also /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/googletest-prefix/src/googletest-stamp/googletest-configure-*.log
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/googletest-prefix/src/googletest-stamp/googletest-configure
[ 12%] Performing build step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-build && /usr/bin/cmake -Dmake=/usr/bin/gmake -P /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/googletest-prefix/src/googletest-stamp/googletest-build-.cmake
[ 12%] Linking CXX executable test_math_eigen_impl
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_math_eigen_impl.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_math_eigen_impl.dir/test_math_eigen_impl.cpp.o -o test_math_eigen_impl 
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 12%] Built target test_math_eigen_impl
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/fmpi_stubs.dir/build.make unittest/fortran/CMakeFiles/fmpi_stubs.dir/depend
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/fmpi_stubs.dir/DependInfo.cmake --color=
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Scanning dependencies of target fmpi_stubs
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[ 12%] Building Fortran object unittest/fortran/CMakeFiles/fmpi_stubs.dir/mpi_stubs.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/f95   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIC -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/mpi_stubs.f90 -o CMakeFiles/fmpi_stubs.dir/mpi_stubs.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/mpi_stubs.f90: Warning: -D_FORTIFY_SOURCE not defined
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/mpi_stubs.f90: Warning: -D_GLIBCXX_ASSERTIONS not defined
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/mpi_stubs.f90:13:38:
   13 |   SUBROUTINE mpi_comm_split(comm,color,key,newcomm,ierr)
      |                                      1
Warning: Unused dummy argument 'color' at (1) [-Wunused-dummy-argument]
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/mpi_stubs.f90:13:42:
   13 |   SUBROUTINE mpi_comm_split(comm,color,key,newcomm,ierr)
      |                                          1
Warning: Unused dummy argument 'key' at (1) [-Wunused-dummy-argument]
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/mpi.mod unittest/fortran/CMakeFiles/fmpi_stubs.dir/mpi.mod.stamp GNU
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/fmpi_stubs.dir/link.txt --verbose=1
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gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp
[ 12%] Linking CXX static library liblammps_colvars.a
/usr/bin/cmake -P CMakeFiles/colvars.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/colvars.dir/link.txt --verbose=1
/usr/bin/ar qc liblammps_colvars.a CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvaratoms.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_abf.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_histogram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_meta.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_restraint.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_volmaps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvardeps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_replicas.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_tcl.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_volmaps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvartypes.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp.o
/usr/bin/ranlib liblammps_colvars.a
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 12%] Built target colvars
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/flammps.dir/build.make unittest/fortran/CMakeFiles/flammps.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/flammps.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/flammps.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/flammps.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/flammps.dir/depend.internal".
Scanning dependencies of target flammps
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/flammps.dir/build.make unittest/fortran/CMakeFiles/flammps.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 12%] Building Fortran object unittest/fortran/CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/f95   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIC -c /builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90 -o CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90: Warning: -D_FORTIFY_SOURCE not defined
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90: Warning: -D_GLIBCXX_ASSERTIONS not defined
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/liblammps.mod unittest/fortran/CMakeFiles/flammps.dir/liblammps.mod.stamp GNU
[ 12%] Linking Fortran static library libflammps.a
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/cmake -P CMakeFiles/flammps.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/flammps.dir/link.txt --verbose=1
/usr/bin/ar qc libflammps.a CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o
/usr/bin/ranlib libflammps.a
/usr/bin/cmake -E touch unittest/fortran/CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o.provides.build
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 12%] Built target flammps
/usr/bin/gmake  -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/gpu.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/gpu.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/gpu.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles/gpu.dir/depend.internal".
Scanning dependencies of target gpu
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:318:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:227:7: warning: unused variable 'ii' [-Wunused-variable]
  227 |   int ii, vstart=0, iend=_inum;
      |       ^~
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp: In instantiation of 'void LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, int, double**, int*, int*, int*, int**, bool, bool, bool, bool, int&, double, bool&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:398:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:271:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  271 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp: In instantiation of 'int** LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, double**, int*, double*, double*, tagint*, int**, tagint**, bool, bool, bool, bool, int&, int**, int**, double, bool&) [with numtyp = float; acctyp = double; tagint = int]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:398:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:340:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  340 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
-- googletest build command succeeded.  See also /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/googletest-prefix/src/googletest-stamp/googletest-build-*.log
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/googletest-prefix/src/googletest-stamp/googletest-build
[ 12%] No install step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-build && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/googletest-prefix/src/googletest-stamp/googletest-install
[ 12%] No test step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-build && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/googletest-prefix/src/googletest-stamp/googletest-test
[ 12%] Completed 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/CMakeFiles
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/CMakeFiles/googletest-complete
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/googletest-prefix/src/googletest-stamp/googletest-done
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 12%] Built target googletest
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp
In file included from /usr/include/c++/10/cassert:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp:9:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp: In member function 'virtual void ATC::FE_3DMesh::partition_mesh()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp:2124:32: warning: comparison of integer expressions of different signedness: 'std::vector<std::vector<int> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
 2124 |     assert(procEltLists.size() >= nProcs);
      |            ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Array.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Array2D.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp: In member function 'LAMMPS_AL::CoulDSF<float, double>::init(int, int, int, int, int, double, double, _IO_FILE*, double, double*, double, double, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp:83:18: warning: 'MEM[(float * *)&host_write + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   83 |     host_write[i]=host_special_coul[i];
      |     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp: In member function 'LAMMPS_AL::CoulLongCS<float, double>::init(int, double**, int, int, int, int, double, double, _IO_FILE*, double, double*, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp:65:18: warning: 'MEM[(float * *)&host_write + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   65 |     host_write[i]=host_special_coul[i];
      |     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
  448 |   int eflag, vflag;
      |              ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseVector.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:40,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h: In instantiation of 'int ucl_opencl::UCL_D_Vec<numtyp>::resize_ib(int) [with numtyp = int]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:245:20:   required from 'void LAMMPS_AL::LJ_TIP4PLong<numtyp, acctyp>::copy_relations_data(int, tagint*, int*, int, int*, int, int) [with numtyp = float; acctyp = double; tagint = int]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:384:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h:378:15: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  378 |     { if (cols>_cols) return resize(cols); else return UCL_SUCCESS; }
      |           ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h: In instantiation of 'int ucl_opencl::UCL_D_Vec<numtyp>::resize_ib(int) [with numtyp = _lgpu_float4]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:247:14:   required from 'void LAMMPS_AL::LJ_TIP4PLong<numtyp, acctyp>::copy_relations_data(int, tagint*, int*, int, int*, int, int) [with numtyp = float; acctyp = double; tagint = int]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:384:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h:378:15: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h: In instantiation of 'int ucl_opencl::UCL_D_Vec<numtyp>::resize_ib(int) [with numtyp = _lgpu_double4]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:206:31:   required from 'void LAMMPS_AL::LJ_TIP4PLong<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:384:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h:378:15: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_kernel.h:27,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_texture.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Linking CXX static library liblammps_atc.a
/usr/bin/cmake -P CMakeFiles/atc.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/atc.dir/link.txt --verbose=1
/usr/bin/ar qc liblammps_atc.a CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CbPotential.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatCapacity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp.o
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp: In member function 'LAMMPS_AL::SW<float, double>::init(int, int, int, int, double, double, _IO_FILE*, int*, int, int***, int, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_map + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:144:18: note: 'MEM[(int * *)&dview_map + 24B]' was declared here
  144 |   UCL_H_Vec<int> dview_map(lj_types, *(this->ucl_device), UCL_WRITE_ONLY);
      |                  ^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_elem2param + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:129:18: note: 'MEM[(int * *)&dview_elem2param + 24B]' was declared here
  129 |   UCL_H_Vec<int> dview_elem2param(nelements*nelements*nelements,
      |                  ^~~~~~~~~~~~~~~~
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/usr/bin/ranlib liblammps_atc.a
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp: In instantiation of 'void LAMMPS_AL::Tersoff<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:330:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:260:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  260 |   if (nall*this->_max_nbors > _zetaij.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp: In instantiation of 'void LAMMPS_AL::TersoffMod<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:330:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:260:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  260 |   if (nall*this->_max_nbors > _zetaij.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp: In instantiation of 'void LAMMPS_AL::TersoffZBL<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:356:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:285:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  285 |   if (nall*this->_max_nbors > _zetaij.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 21%] Built target atc
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp: In member function 'LAMMPS_AL::Vashishta<float, double>::init(int, int, int, int, double, double, _IO_FILE*, int*, int, int***, int, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_map + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:175:18: note: 'MEM[(int * *)&dview_map + 24B]' was declared here
  175 |   UCL_H_Vec<int> dview_map(lj_types, *(this->ucl_device), UCL_WRITE_ONLY);
      |                  ^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_elem2param + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:160:18: note: 'MEM[(int * *)&dview_elem2param + 24B]' was declared here
  160 |   UCL_H_Vec<int> dview_elem2param(nelements*nelements*nelements,
      |                  ^~~~~~~~~~~~~~~~
[ 22%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp
[ 22%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp.o
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 22%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gpu -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 22%] Linking CXX static library liblammps_gpu.a
/usr/bin/cmake -P CMakeFiles/gpu.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/gpu.dir/link.txt --verbose=1
/usr/bin/ar qc liblammps_gpu.a CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp.o 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/builddir/build/BUILD/lammps-patch_29Oct2020/src/atom.cpp: In member function 'LAMMPS_NS::Atom::data_atoms(int, char*, int, int, int, int, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/atom.cpp:1124:42: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1124 |       imx = utils::inumeric(FLERR,values[iptr],false,lmp);
      |                                          ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_brick.cpp: In member function 'LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_brick.cpp:703:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  703 |   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
      |                            ^~~~~~
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[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_aggregate_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_aggregate_atom.cpp
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_tiled.cpp: In member function 'LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_tiled.cpp:948:25: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  948 |           for (i = 0; i < nlast; i++) {
      |                       ~~^~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_adf.cpp: In member function 'LAMMPS_NS::ComputeADF::init()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_adf.cpp:328:22: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  328 |     array[i][0] = x0 + (i+0.5) * deltax;
      |                   ~~~^~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp: In member function 'LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
  301 |           ptr[n] = 180.0*theta/MY_PI;
      |                    ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp:309:15: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  309 |           ivar++;
      |           ~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp:245:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
      |                                   ^~~~
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[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp: In member function 'LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:413:20: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
  413 |             ptr[n] = engrot;
      |             ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:410:20: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
  410 |             ptr[n] = engvib;
      |             ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:416:20: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             ptr[n] = engtrans;
      |             ~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:395:20: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
  395 |             ptr[n] = engpot;
      |             ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:235:18: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  235 |   double inertia,omegasq;
      |                  ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:422:20: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ptr[n] = vvib;
      |             ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:426:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |             ivar++;
      |             ~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:285:42: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  285 |         btype = onemols[imol]->bond_type[iatom][i];
      |                                          ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:285:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  285 |         btype = onemols[imol]->bond_type[iatom][i];
      |                         ^~~~
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_spread_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_spread_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_spread_atom.cpp
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cluster_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cluster_atom.cpp
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cna_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cna_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1521:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1521 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1522:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1522 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
      |                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1521:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1521 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1595:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1595 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1596:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1596 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
      |                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1595:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1595 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1700:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1700 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1701:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1701 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
      |                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1700:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1700 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                              ^
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:419:52: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  419 |         if (minflag[idim] == COORD) minvalue[idim] *= scale;
      |                                     ~~~~~~~~~~~~~~~^~~~~~~~
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com_chunk.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com_chunk.cpp
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_contact_atom.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_erotate_sphere.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_dihedral_local.cpp: In member function 'LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_dihedral_local.cpp:319:15: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  319 |           ivar++;
      |           ~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_dihedral_local.cpp:242:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  242 |         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
      |                                   ^~~~
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_erotate_sphere_atom.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_gyration_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_gyration_chunk.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_global_atom.cpp: In member function 'LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_global_atom.cpp:504:24: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |             if (j >= 0 && j < vmax) vector_atom[i] = source[j];
      |                 ~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_global_atom.cpp:443:24: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  443 |             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
      |                 ~~~~~~~^~~~~~~~~~~
[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_heat_flux.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_ke.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_ke.cpp
[ 26%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_ke_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_ke_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_ke_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_improper_local.cpp: In member function 'LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_improper_local.cpp:161:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
      |                                   ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_improper_local.cpp:217:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
  217 |           cbuf[n] = 180.0*acos(c)/MY_PI;
      |                 ^
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_property_local.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_property_local.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp: In member function 'LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp:253:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  253 |       scalar = (temperature->dof * boltz * t +
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  254 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
      |                 ~~~~~~~~~                     
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp: In member function 'LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp:308:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  308 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
      |                    ~~~~~~~~~~~^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_rdf.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/delete_atoms.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/delete_atoms.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp: In member function 'LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:718:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  718 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
      |                                                ~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:718:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
  718 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
      |                        ~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp: In member function 'LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:271:66: warning: 'subsetseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
  271 |   if (subsetflag != NONE) ranlatt = new RanMars(lmp,subsetseed+me);
      |                                                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:267:40: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
  267 |     ranmol = new RanMars(lmp,molseed+me);
      |                                        ^
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/delete_bonds.cpp.o
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[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_cfg.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp: In member function 'LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:883:38: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  883 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:883:21: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  883 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                     ^~~~
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp: In member function 'LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:784:38: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  784 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:784:21: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  784 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                     ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp: In member function 'LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp:518:13: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  518 |     atom->v = vhold;
      |     ~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp:517:13: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  517 |     atom->x = xhold;
      |     ~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp:519:17: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  519 |     atom->image = imagehold;
      |     ~~~~~~~~~~~~^~~~~~~~~~~
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_dcd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_dcd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_dcd.cpp
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_deprecated.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_movie.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp: In member function 'LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp:1132:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1132 |                 (*ptr != 0.0 && value != 0.0))
      |                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp:629:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
  629 |     double *values;
      |             ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp:1141:42: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1141 |         for (i = 0; i < nlocal; i++, ptr += nstride) values[i] = *ptr;
      |                                      ~~~~^~~~~~~~~~
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_xyz.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_xyz.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp: In member function 'LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:1010:33: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1010 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:1004:33: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1004 |             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:945:54: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  945 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:945:37: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  945 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
      |                                     ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:845:29: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
  845 |         image->draw_cylinder(pt3,pt1,color,tdiamvalue,3);
      |         ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:1010:33: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1010 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/finish.cpp: In member function 'LAMMPS_NS::Finish::end(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/finish.cpp:552:9: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
  552 |     tmp = MAX(nneigh,nneighfull);
/builddir/build/BUILD/lammps-patch_29Oct2020/src/finish.cpp:552:9: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_chunk.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_chunk.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp: In member function 'LAMMPS_NS::FixAdapt::change_settings()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp:628:33: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  628 |             if (scaleflag) q[i] *= scale;
      |                            ~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp:607:38: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  607 |             if (scaleflag) radius[i] *= scale;
      |                            ~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp: In member function 'LAMMPS_NS::FixAdapt::restore_settings()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp:709:43: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  709 |               else rmass[i] *= scale*scale*scale;
      |                                ~~~~~~~~~~~^~~~~~
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[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_histo.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_histo_weight.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_correlate.cpp: In member function 'LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_correlate.cpp:480:26: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  480 |     values[lastindex][i] = scalar;
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_box_relax.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_balance.cpp: In member function 'LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_balance.cpp:298:53: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  298 |   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp: In member function 'LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp:970:14: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
  970 |         else if (lengthone != length)
      |              ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp: In member function 'LAMMPS_NS::FixAveTime::invoke_scalar(long)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp:629:20: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  629 |     else vector[i] += scalar;
      |          ~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp: In member function 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp:414:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
  414 |         if (i == 0) extarray = value;
      |                     ~~~~~~~~~^~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_nh.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_nh.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp: In member function 'LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp:842:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  842 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp:812:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  812 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp:782:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
      |                                             ~~~~~~~~~~~~~~~~^~~~
[ 31%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_nh_sphere.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_restrain.cpp: In member function 'LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_restrain.cpp:646:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  646 |   df1 = df1*cos_target[m] - ddf1*sin_target[m];
      |                             ~~~~^~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_harmonic.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_vector.cpp: In member function 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_vector.cpp:149:14: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |     extarray = finalvalue;
      |     ~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_vector.cpp:138:10: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |     else if (value != finalvalue)
      |          ^~
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj1043.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj1043.cpp
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj126.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj126.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp: In member function 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp:63:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   63 |       int newwall;
      |           ^~~~~~~
[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj93.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmtlib_os.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmtlib_os.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_reflect.cpp: In member function 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_reflect.cpp:57:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   57 |       int newwall;
      |           ^~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/image.cpp: In member function 'LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/image.cpp:517:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  517 |           bool xin = ((surface[0]+tdir[0]) >= -radius) &&
      |                       ~~~~~~~~~~~^~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp: In function 'MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:7: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:33: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |         ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:20: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |         ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |         ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:187:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |   p[3] = c_phi*p[3] + s_phi*kp[3];
      |                       ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:186:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |   p[2] = c_phi*p[2] + s_phi*kp[2];
      |                       ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:185:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |   p[1] = c_phi*p[1] + s_phi*kp[1];
      |                       ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:184:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |   p[0] = c_phi*p[0] + s_phi*kp[0];
      |                       ~~~~~^~~~~~
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_special.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire_old.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire_old.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire.cpp: In member function 'LAMMPS_NS::MinFire::iterate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire.cpp:439:46: warning: 'scale2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  439 |             v[i][0] = scale1*v[i][0] + scale2*f[i][0];
      |                                        ~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire.cpp:344:38: warning: 'scale1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  344 |             v[i][2] = scale1*v[i][2] + scale2*f[i][2];
      |                       ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp: In member function 'LAMMPS_NS::LAMMPS::LAMMPS(int, char**, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp:183:14: warning: 'wlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |   int wfirst,wlast;
      |              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp:183:7: warning: 'wfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |   int wfirst,wlast;
      |       ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_atomonly.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_atomonly.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp: In member function 'LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp:1681:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1681 |     if (newtflag) {
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp: In member function 'LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp:1793:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1793 |     if (newtflag) {
      |     ^~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp: In member function 'LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp:101:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  102 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  103 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp:101:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp:101:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp: In member function 'LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp:107:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  108 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  109 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp:107:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp:107:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_atomonly_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp: In member function 'LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:102:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  102 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  103 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  104 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:102:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  102 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:102:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  102 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:88:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   88 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp: In member function 'LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp:108:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  109 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  110 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp:108:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp:108:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp: In member function 'LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp:101:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  102 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  103 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp:101:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp:101:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp:105:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  105 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  106 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  107 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp:105:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  105 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp:105:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  105 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp:113:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  115 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp:113:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp:113:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp:137:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  138 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  139 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp:137:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp:137:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp:111:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp:111:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp:111:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp:112:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp:112:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp: In member function 'LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp:145:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  146 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  147 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp:145:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp:145:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp: In member function 'LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  122 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp:120:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp:120:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:103:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  103 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  104 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  105 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:103:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  103 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:103:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  103 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   89 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:112:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:112:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:98:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   98 |         if (includegroup && !(mask[j] & bitmask)) continue;
      |                              ~~~~~~~~~^~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp: In member function 'LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:120:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  122 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:120:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:120:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   90 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:148:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:129:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  130 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  131 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:129:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:129:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:148:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:70:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:70:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:70:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:71:16: note: 'ipage_middle' was declared here
   71 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp: In member function 'LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:194:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:175:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  177 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:175:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:175:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:149:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:69:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   69 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:69:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   69 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:69:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   69 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:70:16: note: 'ipage_middle' was declared here
   70 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp: In member function 'LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:156:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:137:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  138 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  139 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:137:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:137:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:156:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:70:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:70:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:70:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:71:16: note: 'ipage_middle' was declared here
   71 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:144:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:127:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  127 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  128 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  129 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:127:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  127 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:127:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  127 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:144:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:74:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   74 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:75:16: note: 'ipage_middle' was declared here
   75 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:113:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp: In member function 'LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:164:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  164 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:146:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  147 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  148 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:146:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:146:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:164:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  164 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:77:16: note: 'ipage_middle' was declared here
   77 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:76:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   76 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:116:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp.o
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[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_halffull_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_halffull_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp:77:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   77 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newton.cpp: In member function 'LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newton.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   80 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size.cpp
[ 38%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size_off2on.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size_off2on.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp: In member function 'LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp:150:26: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  150 |       numneigh_middle[i] = n_middle;
      |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:74:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   74 |     ndatum += n;
      |     ~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp:61:16: note: 'ipage_middle' was declared here
   61 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp: In member function 'LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:398:30: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |         ftable[i] = qqrd2e/r * fgamma;
      |                     ~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:399:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |         etable[i] = qqrd2e/r * egamma;
      |                     ~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:401:39: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  401 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
      |                                ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:401:39: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:401:49: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  401 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
      |                                         ~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp: In member function 'LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:1763:24: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1763 |   if (atom->q) atom->q = q_hold;
      |                ~~~~~~~~^~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp: In member function 'LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:487:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  487 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:488:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  487 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  488 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:482:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  482 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                            ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:483:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  483 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:482:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  482 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                            ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp: In member function 'LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:166:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:162:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:163:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  163 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:167:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:162:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp: In member function 'LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:485:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  485 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:486:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  485 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  486 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:480:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  480 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:481:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:480:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  480 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp: In member function 'LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:169:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:166:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:170:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  170 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_cut.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_debye.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_debye.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_dsf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp: In member function 'LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:468:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:468:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                      ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp: In member function 'LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:147:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:147:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
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[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_dpd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_dpd.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp: In member function 'LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp:317:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp:317:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |     phicoul = prefactor * (erfcc-e_shift*r);
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp:317:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_dpd_tstat.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp: In member function 'LAMMPS_NS::PairHybridOverlay::copy_svector(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp:148:36: warning: 'this_style' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |         svector[n++] = this_style->svector[l];
      |                        ~~~~~~~~~~~~^~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp: In member function 'LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp:73:8: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   73 |   arg[2+multflag] = arg[1];
      |       ~^~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid.cpp: In member function 'LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid.cpp:476:8: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
  476 |   arg[2+multflag] = arg[1];
      |       ~^~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp: In member function 'LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:354:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  354 |     philj = epsilon[itype][jtype]*(PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                                    ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:352:46: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  352 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp: In member function 'LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp:392:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |             fpair = factor_lj*forcelj*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp:395:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  395 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  396 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp: In member function 'LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:132:49: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |             evdwl = epsilon[itype][jtype]*(PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                                            ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:130:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp: In member function 'LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp:386:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  386 |             fpair = factor_lj*forcelj*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp:389:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  390 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp.o
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[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp:453:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  453 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  454 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp:140:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  140 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  141 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:216:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  216 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  217 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:212:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_expand.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_expand.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:110:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  110 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  110 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:113:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:466:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  466 |     eng += phicoul;
      |     ~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  465 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                            ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:459:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  459 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  460 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:169:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:162:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp: In member function 'LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp:168:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  162 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp:436:44: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp:138:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth_linear.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth_linear.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:503:30: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  503 |         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:500:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  500 |     philj += ljsw5[itype][jtype];
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:492:29: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  492 |         tc*tc*tc * (coulsw3 + coulsw4*tc);
      |                    ~~~~~~~~~^~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:159:49: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
      |                                        ~~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:169:38: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
      |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:166:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             evdwl += ljsw5[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:165:41: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  165 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp: In member function 'LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:452:33: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  452 |     philj = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:449:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  450 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp: In member function 'LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:142:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  142 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:139:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  139 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  140 |                              lj4[itype][jtype]) - offset[itype][jtype];
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_morse.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_morse.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_soft.cpp.o
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[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp: In member function 'LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp:394:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  394 |             fpair = factor_mie*forcemie*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp:397:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  397 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  398 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_ufm.cpp.o
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[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_yukawa.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_yukawa.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp: In member function 'LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:1019:10: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1019 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
      |         ~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:1019:37: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1019 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
      |                                    ~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp: In member function 'LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:171:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:171:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:168:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zero.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zero.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/potential_file_reader.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/potential_file_reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/potential_file_reader.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp: In member function 'LAMMPS_NS::PairTable::read_table(LAMMPS_NS::PairTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:426:38: warning: 'rfile' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |     if (tb->rflag && fabs(rnew-rfile)/rfile > EPSILONR) rerror++;
      |                      ~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp: In member function 'LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp:135:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  135 |               (sw3[itype][jtype] + sw4[itype][jtype]*t);
      |               ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp: In member function 'LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp:378:26: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |       (sw3[itype][jtype] + sw4[itype][jtype]*t);
      |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp: In member function 'LAMMPS_NS::RanMars::select_subset(long, int, int*, int*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp:219:38: warning: 'activeall[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  219 |       thresh = 1.0 * (nmark-ntarget) / activeall[mode];
      |                ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/read_data.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp: In member function 'LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:693:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
  693 |   vec[5] = kme + 1;
      |            ~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:692:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
  692 |   vec[4] = jme + 1;
      |            ~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:691:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
  691 |   vec[3] = ime + 1;
      |            ~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp: In member function 'LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:887:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
  887 |   return index;
      |          ^~~~~
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp: In member function 'LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp:577:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  577 |       if (readnumber == 2) MPI_Send(nullptr,0,MPI_INT,procpartner2,0,world);
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp:504:31: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |     if (me < procmid) hi[dim] = valuehalf;
      |                       ~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp: In member function 'LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp:1069:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |       if (readnumber == 2) MPI_Send(nullptr,0,MPI_INT,procpartner2,0,world);
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/reader.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::check_eof_magic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp:1198:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
 1198 |     fread(str,sizeof(char),n,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_native.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp: In member function 'LAMMPS_NS::ReadDump::seek(long, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp:309:19: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
  309 |     if (ntimestep < nrequest) ntimestep = -1;
      |         ~~~~~~~~~~^~~~~~~~~~
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_xyz.cpp.o
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[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp: In member function 'LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp:191:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |       contact[i].delz = xorig[2] - zs;
      |                         ~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp:190:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |       contact[i].dely = xorig[1] - ys;
      |                         ~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp:189:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |       contact[i].delx = xorig[0] - xs;
      |                         ~~~~~~~~~^~~~
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_deprecated.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_deprecated.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp: In member function 'LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp:335:14: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |   add_contact(0,x,xp,yp,zp);
      |   ~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp:335:14: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp:335:14: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_intersect.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_intersect.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_plane.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_plane.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp: In member function 'LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp:717:16: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  717 |     add_contact(0,x,xp,yp,zp);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp:717:16: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp:717:16: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_prism.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/set.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/set.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/special.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp: In member function 'LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:56:10: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |   bigint start,stop;
      |          ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:147:27: warning: 'last' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |     for (int i = first; i <= last; i++) {
      |                         ~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:61:7: warning: 'first' may be used uninitialized in this function [-Wmaybe-uninitialized]
   61 |   int first,last;
      |       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:56:16: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |   bigint start,stop;
      |                ^~~~
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/table_file_reader.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/text_file_reader.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/thermo.cpp.o
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[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/update.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/universe.cpp: In member function 'LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/universe.cpp:146:17: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |   MPI_Comm_split(uorig,0,key,&uworld);
      |   ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:712:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  712 |         fread(buf,1,64,fp);
      |         ~~~~~^~~~~~~~~~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/verlet.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/verlet.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp: In member function 'LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:536:61: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  536 |     if (ystyle == EQUAL) vy = input->variable->compute_equal(yvar);
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:541:61: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |     if (zstyle == EQUAL) vz = input->variable->compute_equal(zvar);
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:531:61: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  531 |     if (xstyle == EQUAL) vx = input->variable->compute_equal(xvar);
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:457:8: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  457 |     vz *= zscale;
      |     ~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:453:8: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  453 |     vy *= yscale;
      |     ~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:449:8: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |     vx *= xscale;
      |     ~~~^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:26:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp: In member function 'LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/memory.h:172:10: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |     sfree(array);
      |     ~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:165:12: note: 'vhold' was declared here
  165 |   double **vhold;
      |            ^~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_coeff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_coeff.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_data.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:4032:20: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4032 |     newtree->value = value;
      |     ~~~~~~~~~~~~~~~^~~~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_dump.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_dump.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:4309:30: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4309 |     if (method == AVE) value /= nvec;
      |                        ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:4114:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4114 |     int index,nvec,nstride;
      |                    ^~~~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_restart.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_restart.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:2208:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2208 |       if (op == NOT && expect == ARG) {
      |       ^~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_temp_asphere.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:3555:38: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3555 |       argstack[nargstack++] = value1 + value2*randomequal->gaussian();
      |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:3450:35: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3450 |       argstack[nargstack++] = sqrt(value1);
      |                               ~~~~^~~~~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nh_asphere.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp:138:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |         inertia[0] = tbonus[tri[i]].inertia[0];
      |                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp:129:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |         length = lbonus[line[i]].length;
      |                                ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp:108:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:1005:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1005 |   double *vstore;
      |           ^~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nve_asphere_noforce.cpp:88:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
   88 |       shape = bonus[ellipsoid[i]].shape;
      |                                 ^
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[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_line_lj.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_resquared.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp: In member function 'LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*) [3], double (*) [3], double (*) [3], double (*) [3], double (*) [3], double (*) [3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:726:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  726 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
      |                               ~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:725:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  725 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
      |                               ~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:724:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  724 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
      |                               ~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:726:30: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  726 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
      |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:725:30: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  725 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
      |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:724:30: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  724 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
      |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:726:45: warning: 'MEM[(double *)&dUr2 + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  726 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:725:45: warning: 'MEM[(double *)&dUr2 + 8B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  725 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:724:45: warning: 'MEM[(double *)&dUr2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  724 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:44: warning: 'MEM[(double *)&r12hat + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |                                            ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:573:10: note: 'MEM[(double *)&r12hat + 16B]' was declared here
  573 |   double r12hat[3];
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:643:27: warning: 'MEM[(double *)&r12hat + 8B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  643 |   dchi[1] = temp2*(iota[1]-temp1*r12hat[1]);
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:21: warning: 'MEM[(double *)&r12hat]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |          ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:573:10: note: 'MEM[(double *)&r12hat]' was declared here
  573 |   double r12hat[3];
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_line_lj.cpp: In member function 'LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_line_lj.cpp:303:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  304 |                            evdwl,0.0,fpair,delx,dely,delz);
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp: In member function 'LAMMPS_NS::PairGayBerne::gayberne_lj(int, int, double (*) [3], double (*) [3], double (*) [3], double*, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:44: warning: 'MEM[(double *)&r12hat + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |                                            ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:748:10: note: 'MEM[(double *)&r12hat + 16B]' was declared here
  748 |   double r12hat[3];
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:828:27: warning: 'MEM[(double *)&r12hat + 8B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  828 |   dchi[1] = temp2*(iota[1]-temp1*r12hat[1]);
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:21: warning: 'MEM[(double *)&r12hat]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |          ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:748:10: note: 'MEM[(double *)&r12hat]' was declared here
  748 |   double r12hat[3];
      |          ^~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_nparticle.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_nparticle.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp: In member function 'LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp:377:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  378 |                            evdwl,0.0,fpair,delx,dely,delz);
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_resquared.cpp: In member function 'LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_resquared.cpp:192:26: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |         if (eflag) evdwl = factor_lj*one_eng;
      |                    ~~~~~~^~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nh_body.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nph_body.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nph_body.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nph_body.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp: In member function 'LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp:213:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |   int nedges,nentries;
      |       ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polygon.cpp: In member function 'LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polygon.cpp:336:26: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
  336 |       vertex_against_wall(i, wall_pos, x, f, torque, side,
      |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  337 |                           contact_list, num_contacts, facc);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polygon.cpp:299:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  299 |         if (delr > eradi) dz = cylradius;
      |         ^~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polyhedron.cpp:331:28: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
  331 |         sphere_against_wall(i, wall_pos, side, vwall, x, v, f, angmom, torque);
      |         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/angle_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/angle_class2.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp: In member function 'LAMMPS_NS::PairBodyNparticle::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp:325:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  325 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  326 |                            evdwl,0.0,fpair,delx,dely,delz);
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/bond_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/bond_class2.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp: In member function 'LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp:107:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |   int nei,nej,iefirst,jefirst;
      |               ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp:107:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |   int nei,nej,iefirst,jefirst;
      |       ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp:106:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  106 |   int ni,nj,npi,npj,ifirst,jfirst;
      |                     ^~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/dihedral_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/dihedral_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/dihedral_class2.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:219:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  219 |       if (r > eradi + eradj + cut_inner) continue;
      |               ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:122:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
      |                                           ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:122:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
      |                                   ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:122:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
      |                     ^~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp: In member function 'LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp:814:15: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
  814 |       ev_tally(i1,i2,i3,i4,nlocal,newton_bond,eimproper,
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  815 |                fabcd[0],fabcd[2],fabcd[3],
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  816 |                delxAB,delyAB,delzAB,delxBC,delyBC,delzBC,
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  817 |                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp: In member function 'LAMMPS_NS::PairLJClass2::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp:395:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  395 |             fpair = factor_lj*forcelj*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp:398:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  399 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/fix_wall_colloid.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:465:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  465 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  466 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:465:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  465 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:145:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  146 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:145:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:942:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  942 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  943 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:942:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  942 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:935:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  935 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:935:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  935 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:938:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  938 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:933:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  933 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:541:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:516:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  516 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:541:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:541:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:544:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:544:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:181:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:186:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:189:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  190 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:189:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:183:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:183:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp: In member function 'LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp:77:26: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
   77 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
      |                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp:77:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
   77 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
      |                     ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp: In member function 'LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp:305:37: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
  305 |           Fbmag = prethermostat*sqrt(a_pu);
      |                                 ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp:93:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
   93 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
      |                     ^~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU_poly.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp: In member function 'LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp:541:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |   return factor_lj*phi;
      |                    ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp: In member function 'LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp:192:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |       f[i][2] += delz*fpair;
      |                  ~~~~^~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate_poly.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_freeze.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  240 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:238:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  238 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:245:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  246 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                                     ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:300:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  300 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  301 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp: In member function 'LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:692:7: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  692 |   int ninserted_mols = ninserted_atoms / natom;
      |       ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:708:31: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  708 |       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
      |                               ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:660:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  660 |           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:503:22: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  503 |         coords[0][3] = radtmp;
      |         ~~~~~~~~~~~~~^~~~~~~~
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[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_gran_hooke_history.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_gran_hooke_history.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp: In member function 'LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp:1205:24: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1205 |     F_pulloff = 3*MY_PI*coh*Reff;
      |                 ~~~~~~~^~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole_spin.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp: In member function 'LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1604:36: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1604 |       fs1 = -k_tangential*history[0] - damp_tangential*vtr1;
      |                           ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1493:13: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1493 |     t0 = coh*coh*R2*R2*E;
      |          ~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1493:20: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1493 |     t0 = coh*coh*R2*R2*E;
      |          ~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp: In member function 'LAMMPS_NS::PairGranular::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:403:19: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
  403 |           history = &allhistory[size_history*jj];
      |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:520:28: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
  520 |                 history[1] = Fscrit*fs2/fs + damp_tangential*vtr2;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:182:8: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |   int *touch,**firsttouch;
      |        ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:407:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |           F_pulloff = 3*MY_PI*coh*Reff;
      |                       ~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:240:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
  240 |       allhistory = firsthistory[i];
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:239:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
  239 |       touch = firsttouch[i];
      |                           ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp: In member function 'LAMMPS_NS::PairGranular::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1013:36: warning: 'tangential_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1013 |         tangential_coeffs[i][j][k] = tangential_coeffs[j][i][k] =
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1014 |           tangential_coeffs_one[k];
      |           ~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1013:36: warning: 'tangential_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1009:36: warning: 'tangential_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1009 |         tangential_coeffs[i][j][0] = tangential_coeffs[j][i][0] =
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1010 |           tangential_coeffs_one[0];
      |           ~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:994:36: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  994 |           FOURTHIRDS*mix_stiffnessE(Emod[i][j],Emod[i][j],
      |                      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
  995 |                                     poiss[i][j],poiss[i][j]);
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1000:32: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1000 |         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp:72:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   72 |   int i,total,length,offset,num;
      |         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp:72:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   72 |   int i,total,length,offset,num;
      |               ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp:72:22: warning: unused variable 'offset' [-Wunused-variable]
   72 |   int i,total,length,offset,num;
      |                      ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d_wrap.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp: In member function 'LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:241:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  241 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:241:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  241 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  242 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:237:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:236:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp: In member function 'LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:567:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:567:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  568 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:560:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:560:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:563:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  563 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:558:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  558 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp: In member function 'LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:182:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:179:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  179 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:178:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:183:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp: In member function 'LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:190:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:182:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:191:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:184:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp: In member function 'LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1662:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1662 |                 v5sum += v5_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1661:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1661 |                 v4sum += v4_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1660:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                 v3sum += v3_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1659:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1659 |                 v2sum += v2_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1658:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1658 |                 v1sum += v1_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1657:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1657 |                 v0sum += v0_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp: In member function 'LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2013:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2013 |                 v5sum += v5_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2012:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2012 |                 v4sum += v4_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2011:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2011 |                 v3sum += v3_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2010:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2010 |                 v2sum += v2_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2009:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2009 |                 v1sum += v1_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2008:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2008 |                 v0sum += v0_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:236:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:236:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                      ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:232:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  232 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:231:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  231 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp: In member function 'LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:548:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:548:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                      ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:541:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:541:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:544:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:539:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  539 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:178:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:175:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:174:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:178:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp: In member function 'LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:193:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:185:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:190:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:193:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:187:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:187:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp: In member function 'LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:374:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:376:20: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  376 |     table = etable[itable] + fraction*detable[itable];
      |                    ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:376:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  376 |     table = etable[itable] + fraction*detable[itable];
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:374:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp: In member function 'LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:158:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  158 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:158:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:160:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:160:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp: In member function 'LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:198:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:200:20: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  200 |     table = etable[itable] + fraction*detable[itable];
      |                    ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:200:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  200 |     table = etable[itable] + fraction*detable[itable];
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:198:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp: In member function 'LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:138:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:138:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:140:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  140 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:140:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  140 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:971:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  971 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:963:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  963 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:963:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  963 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  966 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  961 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:546:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  546 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:519:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  519 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:546:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  546 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:546:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  546 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:200:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  200 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:204:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  204 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:204:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  204 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  514 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  506 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  506 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:509:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  509 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:504:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |       phicoul = prefactor*egamma;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:208:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:203:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  203 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:378:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:405:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |               forcecoul = prefactor * fgamma;
      |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1028 |       philj6 = -lj4[itype][jtype]*r6inv +
      |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1029 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1023:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1023 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1011:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1011 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1011:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1011 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1014:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1014 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1009:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1009 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:606:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:570:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  570 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:606:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:606:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:609:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:609:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:929:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  929 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  930 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:921:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  921 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:921:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  921 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:924:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  924 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:919:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  919 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:512:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  512 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:535:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:538:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  538 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:538:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  538 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  216 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  221 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:237:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |               evdwl6 = -lj4[itype][jtype]*r6inv +
      |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
  238 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:218:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  218 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:218:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  218 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:229:36: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  229 |               evdwl12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:182:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:191:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  192 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:184:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_coul_long.cpp
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  465 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:459:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  459 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:454:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |       phicoul = prefactor*egamma;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:198:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:193:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:202:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  202 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  203 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:355:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  355 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:378:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               forcecoul = prefactor * fgamma;
      |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  354 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  381 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  381 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  410 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:412:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:405:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:404:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  404 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:348:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:347:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  347 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:412:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:448:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  448 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:441:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:440:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  440 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:384:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:383:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  383 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:448:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  448 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp: In member function 'LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:378:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:378:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:380:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:373:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:372:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  372 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:316:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  316 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:315:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  315 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:380:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:714:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  714 |             f[jH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:710:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  710 |             f[jH1][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:683:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  683 |             f[iH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:679:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  679 |             f[iH1][0] += fH[0];
      |               ^~~
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_cg.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_cg.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:975:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  975 |             f[jH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:971:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  971 |             f[jH1][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:944:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  944 |             f[iH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:940:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  940 |             f[iH1][0] += fH[0];
      |               ^~~
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1416:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1416 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1415:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1415 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1345:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1345 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1344:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1344 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole_spin.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/fix_qeq_comb.cpp: In member function 'LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/fix_qeq_comb.cpp:162:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |   int i,ii,iloop,loopmax,inum,*ilist;
      |                                ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/fix_qeq_comb.cpp:162:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |   int i,ii,iloop,loopmax,inum,*ilist;
      |                          ^~~~
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[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_atm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_atm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_atm.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:1238:22: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1238 |             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
      |             ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:3906:24: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3906 |       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
      |                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:3946:26: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3946 |         if (k > 0) df[2] += c * kr * xn * yn * zn1;
      |                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:808:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  808 |           fpair = dC*dwij / rij;
      |                   ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:852:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  852 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:847:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  847 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:847:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  847 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:852:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  852 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:823:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  823 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:819:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  819 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:819:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  819 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:823:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  823 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:852:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  852 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:847:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  847 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:823:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  823 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:819:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  819 |           fpair1 = dC*dwikS*wkjS / rikS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:878:21: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  878 |             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:878:21: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_alloy.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp: In member function 'LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1672:56: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1672 |                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
      |                                   ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
 1673 |                         *-dis_jk[2]*r_ik*r_ik)/(r_ik*r_ik*r_jk*r_jk);
      |                         ~~~~~~~~~~~~~~~~~~~~~~          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1397:30: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1397 |             bt_sg[nb_jk].temp=temp_jk;
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1660:52: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
      |                                 ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1660:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
      |                                                     ~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1661:25: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1661 |                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
      |                         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:3386:20: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3386 |               else if(temp_kk==temp_ji&&setting==0) {
      |                    ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp: In member function 'LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp:2197:18: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2197 |             {com6+=prefac_ij2*pcrossk*dfc_k;}
      |              ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_cd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_cd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_cd.cpp
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_fs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_fs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_fs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp: In member function 'LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp:1682:13: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1682 |      prady  += 1.0 *  btor[2] * bbtor * att_eng;
      |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp:1681:13: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1681 |      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
      |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eim.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eim.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eim.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_cd.cpp: In member function 'LAMMPS_NS::PairEAMCD::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_cd.cpp:390:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
  390 |           fpair += D_i * rhojp * t1;
      |                    ~~~~^~~~~~~
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_gw.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp: In member function 'LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:201:9: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  201 |         if (emb > epsilon) {
      |         ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:292:29: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:292:29: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:292:29: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_tfmc.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_tfmc.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp: In member function 'LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:491:34: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  491 |   if (jlast >= 0) jlasttag = tag[jlast];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:489:34: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  489 |   if (jprev >= 0) jprevtag = tag[jprev];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:454:36: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |   for (jbond = 0; jbond < num_bond[jnext]; jbond++)
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:486:34: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  486 |   if (ilast >= 0) ilasttag = tag[ilast];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:484:34: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  484 |   if (iprev >= 0) iprevtag = tag[iprev];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:452:36: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
  452 |   for (ibond = 0; ibond < num_bond[inext]; ibond++)
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:413:24: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  413 |               angle_eng(jnextangletype,j,jnext,jlast);
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:412:24: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |               angle_eng(jangletype,jprev,j,jnext) -
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:411:24: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  411 |               angle_eng(inextangletype,i,inext,ilast) -
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:410:24: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  410 |               angle_eng(iangletype,iprev,i,inext) -
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:450:36: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
  450 |   for (jbond = 0; jbond < num_bond[j]; jbond++)
      |                                    ^
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_widom.cpp.o
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[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/pair_dsmc.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/pair_dsmc.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_tfmc.cpp: In member function 'LAMMPS_NS::FixTFMC::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_tfmc.cpp:254:15: warning: 'masstotal' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |     group->xcm(igroup,masstotal,cm);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/fix_client_md.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_gcmc.cpp: In member function 'LAMMPS_NS::FixGCMC::energy_full()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_gcmc.cpp:2293:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2293 |           if (imolecule == molecule[j]) continue;
      |           ^~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/compute_ti.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp: In member function 'LAMMPS_NS::ServerMC::loop()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:117:19: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |           x[m][2] = xold[2];
      |           ~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:116:19: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |           x[m][1] = xold[1];
      |           ~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:115:19: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  115 |           x[m][0] = xold[0];
      |           ~~~~~~~~^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:15:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/atom.h:356:50: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
  356 |     else if (map_style == 2) return map_find_hash(global);
      |                                     ~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:43:10: note: 'atomid' was declared here
   43 |   tagint atomid;
      |          ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp: In function 'xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp:1140:35: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1140 |         thiscoord[2] = receivebits(buf, bitsizeint[2]);
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp:1139:35: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1139 |         thiscoord[1] = receivebits(buf, bitsizeint[1]);
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp:1138:35: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1138 |         thiscoord[0] = receivebits(buf, bitsizeint[0]);
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_gld.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_gld.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_deposit.cpp: In member function 'LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_deposit.cpp:601:31: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  601 |       atom->nbonds += onemols[imol]->nbonds;
      |                               ^~~~
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_oneway.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp: In member function 'LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp:325:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  325 |         } else if (me == proc && i == iatom) {
      |                    ~~~~~~~~~~~^~~~~~~~~~~~~
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_orient_bcc.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp: In member function 'LAMMPS_NS::FixTTM::read_initial_electron_temperatures(char const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp:362:32: warning: 'iznode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp:362:24: warning: 'iynode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp:362:16: warning: 'ixnode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                ^~~~~~
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/xdr_compat.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/xdr_compat.cpp
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/compute_mliap.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp:478:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  478 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
      |                                           ~~~^~~~~~~~~~~~~~~~~~~~
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_data.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp:150:65: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             evdwl = e0nm[itype][jtype]*(mm[itype][jtype] *
      |                                        ~~~~~~~~~~~~~~~~~~~       
  150 |                                         r0n[itype][jtype]*rninv -
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~^
  151 |                                         nn[itype][jtype] *
      |                                         ~~~~~~~~~~~~~~~~~~       
  152 |                                         r0m[itype][jtype]*rminv) -
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~ 
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp:152:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  151 |                                         nn[itype][jtype] *
      |                                         ~~~~~~~~~~~~~~~~~~
  152 |                                         r0m[itype][jtype]*rminv) -
      |                                         ~~~~~~~~~~~~~~~~~^~~~~~
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:550:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  550 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:550:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  550 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:553:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  553 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:548:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:560:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
      |                                           ~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:183:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:188:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:193:57: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  194 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:194:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:185:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:185:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor_snap.cpp.o
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[ 54%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_model.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_harmonic.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_umbrella.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_umbrella.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_umbrella.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_cvff.cpp: In member function 'LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_cvff.cpp:207:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  207 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_cvff.cpp:206:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       p = 2.0 - p;
      |       ~~^~~~~~~~~
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[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:198:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:501:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  501 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  131 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  131 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:167:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/atom_vec_peri.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/atom_vec_peri.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:533:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  533 |       philj6 = -lj4[itype][jtype]*r6inv +
      |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:528:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  528 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:195:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               evdwl6 = -lj4[itype][jtype]*r6inv +
      |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:187:36: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               evdwl12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
      |                                    ^~~~~
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_damage_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_damage_atom.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:336:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  336 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:335:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:279:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:259:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  259 |             f[iH1][0] += fH[0];
      |               ^~~
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_plasticity_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:378:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:321:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  321 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:301:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  301 |             f[iH1][0] += fH[0];
      |               ^~~
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/fix_peri_neigh.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/fix_peri_neigh.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/fix_peri_neigh.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/pair_peri_eps.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/pair_peri_eps.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/pair_peri_eps.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp: In member function 'LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp:101:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |   double *theta;
      |           ^~~~~
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/pair_peri_lps.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS/fix_poems.cpp: In member function 'LAMMPS_NS::FixPOEMS::readfile(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS/fix_poems.cpp:960:33: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  960 |     if (me == 0) nlen = readline(fp,&line,&maxline);
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp: In member function 'LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:310:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
  310 |     fbiasr = fbias / r0max / rmax;
      |              ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:310:12: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  310 |     fbiasr = fbias / r0max / rmax;
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:306:27: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  306 |     delx = x[imax][0] - x[jmax][0];
      |                           ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:306:14: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  306 |     delx = x[imax][0] - x[jmax][0];
      |              ^~~~
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/neb.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/neb.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp: In member function 'LAMMPS_NS::Hyper::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'biasoverlap' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:262:10: note: 'biasoverlap' was declared here
  262 |   double biasoverlap;
      |          ^~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'allghost_toofar' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:42: note: 'allghost_toofar' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |                                          ^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'rmaxeverbig' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:30: note: 'rmaxeverbig' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |                              ^~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'rmaxever' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:21: note: 'rmaxever' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |                     ^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'tbondbuild' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:10: note: 'tbondbuild' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |          ^~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'avebiasnow' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:260:42: note: 'avebiasnow' was declared here
  260 |   double maxbondperatom,neighbondperbond,avebiasnow;
      |                                          ^~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'neighbondperbond' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:260:25: note: 'neighbondperbond' was declared here
  260 |   double maxbondperatom,neighbondperbond,avebiasnow;
      |                         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'maxbondperatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:260:10: note: 'maxbondperatom' was declared here
  260 |   double maxbondperatom,neighbondperbond,avebiasnow;
      |          ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'maxbiascoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:63: note: 'maxbiascoeff' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                                                               ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'minbiascoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:50: note: 'minbiascoeff' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                                                  ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'avebiascoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:37: note: 'avebiascoeff' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                                     ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'avenbias' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:28: note: 'avenbias' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                            ^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'aveboost' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:19: note: 'aveboost' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                   ^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'nnewbond' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:10: note: 'nnewbond' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |          ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp: In member function 'LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp:608:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  608 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
      |                                  ~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp:608:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp:608:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
  608 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
      |                                                        ~~^~~~~~~~~~
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/prd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/prd.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/tad.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_ehex.cpp: In member function 'LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_ehex.cpp:198:40: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |      fshake = ((FixShake*) modify->fix[id_shake]);
      |                                        ^~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1507:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1507 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1502:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1502 |         lbonus[line[i]].theta = theta;
      |                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1486:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1486 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1430:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1430 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1429:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1429 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1429:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1429 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1652:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1652 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1639:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1639 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1601:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1601 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1600:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1600 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1600:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1600 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2248:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2248 |           radone = lbonus[line[i]].length;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, int*, int*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2318:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2318 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1836:8: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1836 |   int *inbody;
      |        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2128:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2128 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2045:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2045 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2110:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2110 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_msst.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_nphug.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1422:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1422 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1417:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1417 |         lbonus[line[i]].theta = theta;
      |                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1402:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1402 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1560:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1560 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1547:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1547 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2408:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2408 |           radone = lbonus[line[i]].length;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::write_restart_file(char const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2680:22: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2680 |   if (me == 0) fclose(fp);
      |                ~~~~~~^~~~
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:483:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
  483 |   if (langflag) random = new RanMars(lmp,seed + comm->me);
      |                                                         ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/atom_vec_spin.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/atom_vec_spin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/atom_vec_spin.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/compute_spin.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/compute_spin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/compute_spin.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2491:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2491 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1985:8: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1985 |   int *inbody;
      |        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2270:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2270 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2185:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2185 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2252:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2252 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp: In member function 'LAMMPS_NS::FixWallPiston::post_integrate()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp:287:36: warning: 'zlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
  287 |       if (zloflag && x[i][2] < zlo - roughoff) {
      |                                ~~~~^~~~~~~~~~
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/fix_langevin_spin.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/fix_store_kim.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/fix_store_kim.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/fix_store_kim.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp: In member function 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp:53:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |       int newwall;
      |           ^~~~~~~
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_init.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_init.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_init.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_interactions.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_interactions.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_interactions.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_param.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_param.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_param.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2968:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2968 |       c1 = tbonus[tri[i]].c1;
      |                         ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2956:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2956 |       length = lbonus[line[i]].length;
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2940:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2940 |       shape = ebonus[ellipsoid[i]].shape;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:3051:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3051 |       inertia = tbonus[tri[i]].inertia;
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:3038:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3038 |       biglist[k].theta = lbonus[line[i]].theta;
      |                                        ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:3026:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3026 |       shape = ebonus[ellipsoid[i]].shape;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1019:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1019 |       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
      |                               ~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2589:55: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2589 |         double length3 = MathExtra::len3(tbonus[tri[i]].c3);
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2705:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2705 |           double length = lbonus[line[i]].length;
      |                                         ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2681:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2681 |           double *shape = ebonus[ellipsoid[i]].shape;
      |                                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1549:17: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1549 |       xbcoll[1] = xbcollfirst[1];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1548:17: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1548 |       xbcoll[0] = xbcollfirst[0];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1550:17: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1550 |       xbcoll[2] = xbcollfirst[2];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1547:17: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1547 |       xscoll[2] = xscollfirst[2];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1546:17: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1546 |       xscoll[1] = xscollfirst[1];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1545:17: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1545 |       xscoll[0] = xscollfirst[0];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1553:15: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1553 |       norm[2] = normfirst[2];
      |       ~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1552:15: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1552 |       norm[1] = normfirst[1];
      |       ~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1551:15: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1551 |       norm[0] = normfirst[0];
      |       ~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1580:12: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1580 |       else if (type != WALL)
      |            ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1579:49: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1579 |         force_torque(v[i],vsnew,xscoll,xbcoll,f[j],nullptr);
      |                                                 ^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_property.cpp.o
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[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp.o
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[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_units.cpp.o
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[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/pair_kim.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:95:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
   95 |   char *varname, *function, *value;
      |         ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:95:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
   95 |   char *varname, *function, *value;
      |                   ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:95:30: warning: unused variable 'value' [-Wunused-variable]
   95 |   char *varname, *function, *value;
      |                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:101:10: warning: variable 'model_name' set but not used [-Wunused-but-set-variable]
  101 |   char * model_name;
      |          ^~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp:89:14: warning: unused variable 'result' [-Wunused-variable]
   89 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp:106:14: warning: unused variable 'result' [-Wunused-variable]
  106 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:141:14: warning: unused variable 'result' [-Wunused-variable]
  141 |   PyObject * result = PyEval_CallObject(py_init, nullptr);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:159:14: warning: unused variable 'result' [-Wunused-variable]
  159 |   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:177:14: warning: unused variable 'result' [-Wunused-variable]
  177 |   PyObject * result = PyEval_CallObject(py_final_integrate, nullptr);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:195:14: warning: unused variable 'result' [-Wunused-variable]
  195 |   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:214:14: warning: unused variable 'result' [-Wunused-variable]
  214 |   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:232:14: warning: unused variable 'result' [-Wunused-variable]
  232 |   PyObject * result = PyEval_CallObject(py_reset_dt, nullptr);
      |              ^~~~~~
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[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI/compute_voronoi_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI/compute_voronoi_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp: In constructor 'LAMMPS_NS::PythonImpl::PythonImpl(LAMMPS_NS::LAMMPS*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp:56:22: warning: 'void PyEval_InitThreads()' is deprecated [-Wdeprecated-declarations]
   56 |   PyEval_InitThreads();
      |                      ^
In file included from /usr/include/python3.9/Python.h:145,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_compat.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp:23:
/usr/include/python3.9/ceval.h:130:37: note: declared here
  130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
      |                                     ^~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna2_fene.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'LAMMPS_NS::ComputePressureBocs::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp:334:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |       scalar = (temperature->dof * boltz * t +
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  335 |                 virial[0] + virial[1] + virial[2]) / 3.0 *
      |                 ~~~~~~~~~                     
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'LAMMPS_NS::ComputePressureBocs::compute_vector()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp:396:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  396 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
      |                    ~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/fix_bocs.cpp: In member function 'int LAMMPS_NS::FixBocs::read_F_table(char*, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/fix_bocs.cpp:691:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  691 |     for (int i = 0; i < inputLines.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna_fene.cpp
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxrna2_fene.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxrna2_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxrna2_fene.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC/fix_atc.cpp:23:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/fix_nve_dot.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/bui/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
lddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/fix_nve_dot.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/fix_nve_dot.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 62%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/fix_nve_dotc_langevin.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_tdpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_tdpd.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp: In member function 'LAMMPS_NS::PairEDPD::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp:222:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  222 |           Q[j]    -= ( dQc - dQd + dQr );
      |                      ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp:222:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  222 |           Q[j]    -= ( dQc - dQd + dQr );
      |                        ~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp:222:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/fix_colvars.cpp:563:33: warning: unused variable 'id' [-Wunused-variable]
  563 |     std::vector<int>           &id = *(proxy->modify_atom_ids());
      |                                 ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp: In function 'write_group(_IO_FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, int, _IO_FILE*, _IO_FILE*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp:121:7: warning: 'cols' may be used uninitialized in this function [-Wmaybe-uninitialized]
  121 |       if (j == cols) {
      |       ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp: In member function 'LAMMPS_NS::Group2Ndx::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp:171:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |     fclose(fp);
      |     ~~~~~~^~~~
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_saed.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp: In member function 'LAMMPS_NS::Ndx2Group::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp:145:30: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |           tags = read_section(fp,num);
      |                  ~~~~~~~~~~~~^~~~~~~~
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_xrd.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/atom_vec_dpd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/atom_vec_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/atom_vec_dpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'LAMMPS_NS::FixSAEDVTK::invoke_vector(long)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:427:57: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
  427 |         snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
      |                                                         ^~  ~~~~~
In file included from /usr/include/stdio.h:866,
                 from /usr/include/c++/10/cstdio:42,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:27,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:19:
/usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 31 and 158 bytes into a destination of size 128
   70 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   71 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'LAMMPS_NS::FixSAEDVTK::options(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:554:59: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
  554 |           snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
      |                                                           ^~  ~~~~~
In file included from /usr/include/stdio.h:866,
                 from /usr/include/c++/10/cstdio:42,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:27,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:19:
/usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 31 and 158 bytes into a destination of size 128
   70 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   71 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_dpd_energy.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_rx.cpp:580:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  580 |     for (int i = 1; i < nu_bin.size(); ++i)
      |                     ~~^~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/nstencil_half_bin_3d_newton_ssa.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_dpd_fdt.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:39: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |                   which = find_special(onemols[imol]->special[iatom],
      |                           ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  206 |                                        onemols[imol]->nspecial[iatom],
      |                                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  207 |                                        tag[j]-tagprev);
      |                                        ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |                   which = find_special(onemols[imol]->special[iatom],
      |                                                               ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |                   which = find_special(onemols[imol]->special[iatom],
      |                                                ^~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp:370:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  370 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
      |                                          ~~~~~^~~~~~~~~~~~~~~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp: In member function 'LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1227:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1227 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
      |                                ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1241:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1241 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
      |                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1220:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1220 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
      |                                ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1234:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1234 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
      |                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1227:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1227 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1241:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1241 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1220:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1220 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1234:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1234 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp: In member function 'LAMMPS_NS::PairMultiLucy::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp:191:44: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
      |                                            ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/compute_temp_drude.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1011:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1011 |     mixWtSite2old = fractionOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1012:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |     mixWtSite2 = fraction2;
      |     ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1016:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1016 |     mixWtSite2old = nMoleculesOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1017:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1017 |     mixWtSite2 = nMolecules2;
      |     ~~~~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp: In member function 'LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:578:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  578 |     mixWtSite2 = nMolecules2;
      |     ~~~~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:577:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  577 |     mixWtSite2old = nMoleculesOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:573:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  573 |     mixWtSite2 = fraction2;
      |     ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:572:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  572 |     mixWtSite2old = fractionOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude_transform.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp: In member function 'LAMMPS_NS::PairCoulTT::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp:161:46: warning: 'dj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           dcoul = qqrd2e * ( -(q[i]+q[di])*q[dj] - q[di]*(q[j]+q[dj]) ) * scale[itype][jtype] * rinv;
      |                                              ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp:161:39: warning: 'di' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           dcoul = qqrd2e * ( -(q[i]+q[di])*q[dj] - q[di]*(q[j]+q[dj]) ) * scale[itype][jtype] * rinv;
      |                                       ^~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF/compute_ke_eff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF/compute_ke_eff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:234:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  233 |             if (drudetype[type[i]] != NOPOL_TYPE &&
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  234 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:235:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  235 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:198:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:235:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
  235 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  227 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:232:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  232 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:229:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  229 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:240:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  240 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  241 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:230:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  230 |               ecoul = qi*qj * table;
      |                       ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:229:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  229 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/fix_adapt_fep.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/fix_adapt_fep.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp:365:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  365 |     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_long_soft.cpp:373:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_long_soft.cpp:374:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:963:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  963 |       (1.0/(denlj*denlj) - 1.0/denlj);
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:955:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  955 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:956:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  956 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:527:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  527 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
      |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:501:18: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  501 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
      |            ~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:496:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  496 |     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:144:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:187:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               (1.0/(denlj*denlj) - 1.0/denlj);
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:180:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:181:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:523:18: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  523 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
      |            ~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:517:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  517 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:516:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  516 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:159:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:160:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp.o
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[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:498:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  498 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:493:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  493 |     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:149:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:145:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:909:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  909 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:901:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  901 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:902:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  902 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:492:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  492 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  508 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  509 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
      |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  508 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  508 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:175:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:168:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:169:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_morse_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp:737:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  737 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp:412:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  413 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD/dump_h5md.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD/dump_h5md.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD/dump_h5md.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:392:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:391:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:335:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:315:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  315 |             f[iH1][0] += fH[0];
      |               ^~~
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_manifoldforce.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_manifoldforce.cpp
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:360:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  360 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:359:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  359 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:303:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:283:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |             f[iH1][0] += fH[0];
      |               ^~~
[ 68%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_splinetab.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_splinetab.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_splinetab.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
  394 |    double f,dp;
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
  375 |  double alp = al,alm = al;
      |                  ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
  158 |   double x0,x1,dx,dr;
      |                   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:187:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  187 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:203:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  203 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:246:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  246 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:306:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  306 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:329:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  329 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  331 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:334:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  334 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:343:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  343 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:345:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  345 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  358 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:109:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  109 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  119 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:123:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  123 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC/meam_setup_done.cpp: In member function 'LAMMPS_NS::MEAM::phi_meam(double, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC/meam_setup_done.cpp:454:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |     rhobar2 = rho02 / rho_bkgd2 * G2;
      |               ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC/meam_setup_done.cpp:453:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  453 |     rhobar1 = rho01 / rho_bkgd1 * G1;
      |               ~~~~~~^~~~~~~~~~~
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:593:24: warning: unused variable 'mx' [-Wunused-variable]
  593 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
      |                        ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:593:27: warning: unused variable 'itag' [-Wunused-variable]
  593 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
      |                           ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:593:32: warning: unused variable 'jtag' [-Wunused-variable]
  593 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
      |                                ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:598:10: warning: unused variable 'nbc' [-Wunused-variable]
  598 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
      |          ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:598:20: warning: unused variable 'tbl' [-Wunused-variable]
  598 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
      |                    ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:598:30: warning: unused variable 'tbm' [-Wunused-variable]
  598 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
      |                              ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:599:13: warning: unused variable 'lmax_local' [-Wunused-variable]
  599 |   const int lmax_local = lmax;
      |             ^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:608:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
  608 |   double t0,t1;
      |          ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:608:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
  608 |   double t0,t1;
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:617:18: warning: unused variable 'tsort' [-Wunused-variable]
  617 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
      |                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:617:42: warning: unused variable 'tlookup' [-Wunused-variable]
  617 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
      |                                          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:619:10: warning: unused variable 'ntsort' [-Wunused-variable]
  619 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:619:36: warning: unused variable 'ntlookup' [-Wunused-variable]
  619 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
      |                                    ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:1837:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
 1837 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
      |         ^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:1837:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
 1837 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
      |                         ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 384))[6]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 384))[6]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 384))[6]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 384))[6]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 448))[7]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 448))[7]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 448))[7]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 448))[7]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: At global scope:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:575:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
  575 | static void tr_count(const double * restrict A,
      |             ^~~~~~~~
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_dipole.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_temp_rotate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_temp_rotate.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_pressure_grem.cpp: In member function 'LAMMPS_NS::ComputePressureGrem::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_pressure_grem.cpp:85:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |       scalar = (temperature->dof * boltz * t +
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
   86 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
      |                 ~~~~~~~~~                     
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_viscosity_cos.cpp.o
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[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_orient_eco.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_orient_eco.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_orient_eco.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_momentum_chunk.cpp: In member function 'LAMMPS_NS::FixMomentumChunk::end_of_step()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_momentum_chunk.cpp:252:29: warning: 'ke_chunk_local' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |           ke_chunk_local[m] += rmass[i] *
      |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
  253 |             (v[i][0]*v[i][0] + v[i][1]*v[i][1] + v[i][2]*v[i][2]);
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_momentum_chunk.cpp:169:11: warning: 'ke_chunk_old' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |   double *ke_chunk_old,*ke_chunk_new,*ke_chunk_local,*factor;
      |           ^~~~~~~~~~~~
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[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_cossq.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp: In member function 'LAMMPS_NS::FixTTMMod::read_initial_electron_temperatures(char const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp:581:32: warning: 'iznode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp:581:24: warning: 'iynode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp:581:16: warning: 'ixnode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp: In member function 'LAMMPS_NS::FixWallReflectStochastic::wall_particle(int, int, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp:253:9: warning: 'difftest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  253 |         if (difftest < wallaccom[m][dir]) {
      |         ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp: In member function 'LAMMPS_NS::FixWallReflectStochastic::FixWallReflectStochastic(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp:82:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |       int newwall;
      |           ^~~~~~~
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_distance.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_cosine_squared.cpp
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_diel.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_diel.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp: In member function 'LAMMPS_NS::PairAGNI::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:219:34: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  219 |     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
      |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:219:34: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:219:34: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp: In member function 'LAMMPS_NS::PairAGNI::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:459:62: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
  459 |     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
      |                                                              ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:455:14: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |       params[curparam].numeta = nwords-1;
      |              ^~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_edip.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_edip.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulSlaterLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:302:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  302 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
      |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:305:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  305 |         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
      |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulSlaterLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  332 |     fread(&cut_coul,sizeof(double),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  333 |     fread(&lamda,sizeof(double),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  334 |     fread(&offset_flag,sizeof(int),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  335 |     fread(&mix_flag,sizeof(int),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_edip_multi.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:982:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  982 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  983 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:974:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  974 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:974:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  974 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:977:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  977 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:972:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  972 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:560:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:533:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  533 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:560:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:560:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:563:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  563 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:563:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  563 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_spline.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_sw_spline.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_sw_spline.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:278:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  278 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  279 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  280 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~~
  281 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:280:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  280 |               rsq*rcutlj2inv+
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:273:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  273 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:271:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  271 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:273:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  273 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:271:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  271 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:278:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  278 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  279 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  280 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~                                          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:623:11: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  623 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  624 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  625 |       rsq*rcutlj2inv+
      |       ~~~~~~~~~~~~~~~
  626 |       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:625:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  624 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  625 |       rsq*rcutlj2inv+
      |       ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:623:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  623 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  624 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  625 |       rsq*rcutlj2inv+
      |       ~~~~~~~~~~~~~~                                          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:618:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  618 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:616:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  616 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:13: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:618:13: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  618 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:616:13: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  616 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp: In member function 'LAMMPS_NS::PairLocalDensity::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp:492:19: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
  492 |         if (LD[k][index] <= rho_min[k]) {
      |                   ^~~~~
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_momb.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/improper_inversion_harmonic.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/temper_npt.cpp: In member function 'LAMMPS_NS::TemperNPT::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/temper_npt.cpp:308:16: warning: 'boltz_factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  308 |         fprintf(universe->uscreen,"SWAP %d & %d: yes = %d,Ts = %d %d, PEs = %g %g, Bz = %g %g, vol = %g %g\n",
      |         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  309 |                me_universe,partner,swap,my_set_temp,partner_set_temp,
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  310 |                pe,pe_partner,boltz_factor,exp(boltz_factor), vol, vol_partner);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/angle_cosine_buck6d.cpp:179:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  179 |         evdwl = ebuck6d - offset[itype][jtype];
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/angle_cosine_buck6d.cpp:164:11: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  164 |     fpair = forcebuck6d * r32inv;
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/dynamical_matrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/dynamical_matrix.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:558:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  558 |     eng += phicoul;
      |     ~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:556:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  556 |     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
      |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:551:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  551 |     phibuck6d = ebuck6d - offset[itype][jtype];
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:192:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:194:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:187:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             evdwl = ebuck6d - offset[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/third_order.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/third_order.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/third_order.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:211:42: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
  211 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:211:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  211 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                             ~~~~~~~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:211:42: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
  211 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:205:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |             evdwl = ebuck6d - offset[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:612:36: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
  612 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:612:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  612 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:612:36: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
  612 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:606:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |     phibuck6d = ebuck6d - offset[itype][jtype];
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_alloy_types.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp: In member function 'LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp:824:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
  824 |     indxr[i] = irow;
      |     ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp:787:9: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |   int i,icol,irow,j,k,l,ll,idr,idc;
      |         ^~~~
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_canonical_coloured.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_convex_hull_incremental.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_convex_hull_incremental.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_deformation_gradient.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_deformation_gradient.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_deformation_gradient.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp:206:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  206 |   if (atom_index < data->nlocal) {
      |       ~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp:223:11: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  223 |     if (j == atom_index)
      |         ~~^~~~~~~~~~~~~
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[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc.cpp
In file included from /usr/include/string.h:519,
                 from /usr/include/c++/10/cstring:42,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:12,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.h:27,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:18:
In function 'strncpy',
    inlined from 'LAMMPS_NS::FixBondReact::write_restart(_IO_FILE*)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:3617:12:
/usr/include/bits/string_fortified.h:91:34: warning: 'strncpy' specified bound 256 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_bonds.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_bonds.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp: In member function 'LAMMPS_NS::FixBondReact::limit_bond(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:2411:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2411 |     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
      |                                                                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:2388:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2388 |     delete [] temp_limit_glove;
      |               ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp: In member function 'LAMMPS_NS::FixBondReact::unlimit_bond()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:2432:8: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2432 |   int *i_statted_tags;
      |        ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'LAMMPS_NS::FixQEqReax::pre_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp:544:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |     qeq_time = t_end - t_start;
      |                ~~~~~~^~~~~~~~~
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_species.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_species.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_species.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_allocate.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_allocate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_allocate.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp: In member function 'LAMMPS_NS::PairReaxC::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp:555:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  555 |     data->timing.nbrs = t_end - t_start;
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_control.cpp:121:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  121 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_hydrogen_bonds.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_init_md.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_init_md.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_init_md.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:58:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   58 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:61:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   61 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:80:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   80 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:92:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   92 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:97:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   97 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:98:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   98 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:99:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   99 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:152:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  152 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:178:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  178 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:197:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  197 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:216:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  216 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:236:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  236 |       fgets( s, MAX_LINE, fp );
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:321:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  321 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:331:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  331 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:335:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  335 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:364:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  364 |       fgets(s,MAX_LINE,fp);
      |       ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:487:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  487 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:492:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  492 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:553:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  553 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:558:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  558 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:613:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  613 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:618:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  618 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:684:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  684 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:694:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  694 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'LAMMPS_NS::FixRigidMeso::set_xv()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:330:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  330 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:329:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  329 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:329:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  329 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp: In member function 'LAMMPS_NS::FixMesoMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp:705:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  705 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp:674:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  674 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp:643:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  643 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'LAMMPS_NS::FixRigidMeso::set_v()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:450:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  450 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:449:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:449:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/atom_vec_sph.cpp.o
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_e_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_e_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_e_atom.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_rho_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_rho_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_rho_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:434:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  434 |   fgets(ptr,MAXLINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:437:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  437 |     fgets(ptr,MAXLINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:488:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  488 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:492:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  492 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:500:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  500 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:509:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  509 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:527:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  527 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:541:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  541 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:564:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  564 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:567:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  567 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:620:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  620 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:632:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  632 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:654:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  654 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:667:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  667 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:674:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  674 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:694:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  694 |     fgets(ptr,MAXLINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:697:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  697 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:707:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  707 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:718:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  718 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:721:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  721 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:726:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  726 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:734:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  734 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:737:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  737 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:744:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  744 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:747:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  747 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:757:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  757 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:760:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  760 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:765:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  765 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:791:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  791 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:794:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  794 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:802:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  802 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:812:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  812 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_t_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_t_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_t_atom.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph_stationary.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph_stationary.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph_stationary.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'LAMMPS_NS::PairSMTBQ::tabqeq()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:1458:43: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1458 |             ddij = aCoeff*(r- rc-nang) *(2+bCoeff*(r-rc-nang))*exp(bCoeff*r);
      |                                         ~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:1457:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1457 |           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
      |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'LAMMPS_NS::PairSMTBQ::Charge()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:2593:59: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2593 |     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
      |                                                           ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:2812:8: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2812 |     dt = t_end - t_init;
      |     ~~~^~~~~~~~~~~~~~~~
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF/fix_nh_uef.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF/compute_pressure_uef.cpp: In member function 'LAMMPS_NS::ComputePressureUef::compute_vector()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF/compute_pressure_uef.cpp:143:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  143 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
      |                    ~~~~~~~~~~~^
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:659:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  659 |     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
      |               ~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:693:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  693 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:676:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  676 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  677 |         offset[itype][jtype];
      |         ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:667:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  667 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:667:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  667 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:670:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  670 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:665:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |       phicoul = prefactor*erfc1;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:684:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  684 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
      |               ~~~~~~~~~~~~~~~~~~~~~^~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:185:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |             ecoul = prefactor*erfc1;
      |             ~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:190:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:212:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:195:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:203:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  203 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:187:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:187:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  677 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:693:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  693 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  677 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  668 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  668 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:671:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  671 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:666:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  666 |       phicoul = prefactor*erfc1;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:684:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  684 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
      |               ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:188:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |             ecoul = prefactor*erfc1;
      |             ~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:193:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:214:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  214 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:23: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:205:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:190:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:190:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o
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[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_wolf_cs.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:141:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:138:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  142 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp:141:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp:138:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  142 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:529:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  529 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:504:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:529:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  529 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:529:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  529 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:532:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  532 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:532:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  532 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:167:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:172:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:175:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:175:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:169:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:169:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:179:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  179 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:171:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:176:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:180:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:173:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:173:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_data.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:177:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:169:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:174:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:177:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:171:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:171:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:158:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  158 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:158:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:160:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:160:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:524:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  524 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:501:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  501 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:524:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  524 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:524:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  524 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:527:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  527 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:527:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  527 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:170:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  170 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:175:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:178:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  179 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:172:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:172:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_nh_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_nh_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_nh_omp.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_nh_sphere_omp.cpp.o
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[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_harmonic_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp: In member function 'LAMMPS_NS::BondFENEOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp:141:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp: In member function 'LAMMPS_NS::BondFENEOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp:141:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'LAMMPS_NS::BondFENEExpandOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp:145:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_morse_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_morse_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'LAMMPS_NS::BondFENEExpandOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp:145:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
[ 82%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_nonlinear_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nve_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nve_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nvt_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nvt_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nvt_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_v_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:678:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  678 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:665:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_v_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:678:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  678 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:665:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_qeq_reax_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_qeq_reax_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_qeq_reax_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_v_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:678:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  678 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:665:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_class2_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_class2_omp.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_qeq_reax_omp.cpp:346:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |     qeq_time = t_end - t_start;
      |                ~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_v_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:619:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  619 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:606:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_v_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:619:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  619 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:606:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_v_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:619:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  619 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:606:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_harmonic_omp.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_umbrella_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:236:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |       p = 2.0 - p;
      |       ~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:236:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |       p = 2.0 - p;
      |       ~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<0, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cossq_omp.cpp.o
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[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_fourier_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pppm_tip4p_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pppm_tip4p_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp: In function 'LAMMPS_NS::NPairFullBinOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:111:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:49:10: note: 'tagprev' was declared here
   49 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:111:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:48:43: note: 'iatom' was declared here
   48 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:111:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:48:38: note: 'imol' was declared here
   48 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function 'LAMMPS_NS::NPairFullBinGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:117:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  118 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  119 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:117:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:43: note: 'iatom' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:117:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:38: note: 'imol' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp: In function 'LAMMPS_NS::NPairFullMultiOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:119:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  120 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:50:10: note: 'tagprev' was declared here
   50 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:119:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:49:46: note: 'iatom' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:119:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:49:41: note: 'imol' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp: In function 'LAMMPS_NS::NPairFullNsqOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:111:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:111:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:50:36: note: 'iatom' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:111:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:50:31: note: 'imol' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function 'LAMMPS_NS::NPairFullNsqGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:111:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:111:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:36: note: 'iatom' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:111:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:31: note: 'imol' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  117 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  118 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtoffGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  125 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  126 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  127 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
   55 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  125 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  125 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtonTriOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  123 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  124 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here
   50 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:148:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  149 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  150 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:10: note: 'tagprev' was declared here
   50 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:148:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:43: note: 'iatom' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:117:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:38: note: 'imol' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfMultiNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  123 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  124 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  125 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
   52 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  123 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  123 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfMultiNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  157 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  158 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:119:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function 'LAMMPS_NS::NPairHalfMultiNewtonTriOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  133 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  134 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here
   52 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfNsqNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here
   53 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here
   52 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here
   52 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function 'LAMMPS_NS::NPairHalfNsqNewtoffGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  122 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here
   56 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here
   55 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here
   55 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfNsqNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  131 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  132 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here
   52 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here
   51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here
   51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
      |                                         ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaBinNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  148 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  149 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
   56 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here
   55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here
   55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                 ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here
   55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                        ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
   58 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaBinNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  194 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here
   55 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:149:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                 ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:167:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                        ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:212:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaBinNewtonTriOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  155 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  156 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here
   55 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                 ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                        ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:22:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:74:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   74 |     ndatum += n;
      |     ~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here
   94 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaNsqNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  145 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  146 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here
   57 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here
   56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
      |                                               ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here
   56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here
   56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
      |                                 ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here
   59 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaNsqNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  164 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here
   58 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here
   57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here
   57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
      |                                                    ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here
   57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
      |                                           ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here
   60 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:178:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:178:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_debye_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_debye_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_dsf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_wolf_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_dpd_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'LAMMPS_NS::PairLJCubicOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:150:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  150 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:147:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'LAMMPS_NS::PairLJCubicOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:150:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  150 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:147:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  160 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:19: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  160 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:19: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_expand_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebyeOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebyeOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSFOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  177 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSFOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  177 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulWolfOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulWolfOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:183:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             evdwl += ljsw5[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:183:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             evdwl += ljsw5[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'LAMMPS_NS::PairLJSmoothOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:154:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:152:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  152 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:149:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  150 |                              lj4[itype][jtype]) - offset[itype][jtype];
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'LAMMPS_NS::PairLJSmoothOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:154:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:152:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  152 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:149:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  150 |                              lj4[itype][jtype]) - offset[itype][jtype];
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_soft_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_ufm_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp: In member function 'LAMMPS_NS::PairTableOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:184:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gayberne_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp: In member function 'LAMMPS_NS::PairTableOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:184:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_resquared_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_resquared_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp: In member function 'LAMMPS_NS::PairZBLOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp:149:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |               (sw3i[jtype] + sw4i[jtype]*t);
      |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp: In member function 'LAMMPS_NS::PairZBLOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp:149:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |               (sw3i[jtype] + sw4i[jtype]*t);
      |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  162 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  162 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_poly_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:190:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:195:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:190:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:195:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_poly_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<0, 0, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:210:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  210 |         f[j].z -= delz*fpair;
      |         ~~~~~~~^~~~~~~~~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_colloid_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       fztmp += delz*fpair;
      |                ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:210:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  210 |         f[j].z -= delz*fpair;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       fztmp += delz*fpair;
      |                ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:210:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  210 |         f[j].z -= delz*fpair;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       fztmp += delz*fpair;
      |                ~~~~^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hertz_history_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hertz_history_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hooke_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hooke_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hooke_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  256 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  261 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  262 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  256 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  261 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  262 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
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[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:171:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:172:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:171:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:172:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:189:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:184:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:193:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  194 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:189:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:184:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:193:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  194 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  462 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  462 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:416:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:412:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  357 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  353 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:416:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:412:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  357 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  353 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  439 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  439 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_adp_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1337:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1337 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1333:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1333 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1306:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1306 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1302:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1302 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1599:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1599 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1595:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1595 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1568:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1568 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1564:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1564 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp: In member function 'LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:1000:26: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1000 |             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
      |             ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_morse_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp: In member function 'LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:570:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  570 |           fpair = dC*dwij / rij;
      |                   ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:614:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:609:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:609:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:614:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:585:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  585 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:581:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:581:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:585:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  585 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:614:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:609:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:585:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  585 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:581:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |           fpair1 = dC*dwikS*wkjS / rikS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:640:25: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  640 |             v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr);
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:640:25: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_comb_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_alloy_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_fs_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eim_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_rebo_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_sw_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_sw_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_zbl_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_table_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_table_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
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[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_lps_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:405:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:401:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  401 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  342 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:376:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  376 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:372:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  372 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  313 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_pmb_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:249:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |             if (drudetype[type[i]] != NOPOL_TYPE &&
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  249 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |               ecoul = qi*qj * table;
      |                       ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  242 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  247 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:255:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  255 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  256 |               offseti[jtype];
      |               ~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:249:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |             if (drudetype[type[i]] != NOPOL_TYPE &&
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  249 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |               ecoul = qi*qj * table;
      |                       ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  242 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  247 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:255:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  255 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  256 |               offseti[jtype];
      |               ~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In function 'LAMMPS_NS::PairLJCutTholeLongOMP::compute(int, int) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:124:7: note: 'di_closest' was declared here
  124 |   int di_closest;
      |       ^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:123:13: note: 'dqi' was declared here
  123 |   double qj,dqi,dqj,dcoul,asr,exp_asr;
      |             ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:124:7: note: 'di_closest' was declared here
  124 |   int di_closest;
      |       ^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:123:13: note: 'dqi' was declared here
  123 |   double qj,dqi,dqj,dcoul,asr,exp_asr;
      |             ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:160:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:156:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:160:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:156:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:182:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:175:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:182:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:175:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:420:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  420 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:416:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:361:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  361 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:357:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  357 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:391:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:387:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  387 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:332:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:328:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  328 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp: In member function 'LAMMPS_NS::PairAGNIOMP::eval<1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp:158:38: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  158 |     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
      |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
  159 |                                       fxtmp,fytmp,fztmp,
      |                                       ~~~~~~~~~~~~~~~~~~
  160 |                                       delx,dely,delz,thr);
      |                                       ~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp:158:38: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp:158:38: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_diel_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_diel_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_diel_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_edip_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gauss_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gauss_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gauss_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_meam_spline_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_meam_spline_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_meam_spline_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSFOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~~
  291 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:290:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~                                          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSFOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~~
  291 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:290:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~                                          
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_table_omp.cpp.o
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[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_reaxc_omp.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'LAMMPS_NS::PairReaxCOMP::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_reaxc_omp.cpp:223:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  223 |     data->timing.nbrs = t_end - t_start;
      |                         ~~~~~~^~~~~~~~~
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[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_init_md_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_init_md_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_init_md_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_v_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:964:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  964 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:951:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  951 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_v_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:964:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  964 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:951:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  951 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_v_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:964:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  964 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:951:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  951 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_long_coul_long_opt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_long_coul_long_opt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongOpt::eval<1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |                 ecoul = prefactor*erfc;
      |                 ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:23: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:32: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongOpt::eval<1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |                 ecoul = prefactor*erfc;
      |                 ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:23: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:32: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_opt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_opt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_alloy_opt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_alloy_opt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 0, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             f[jH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  350 |             f[iH2][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |             f[iH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  409 |             f[jH2][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_fs_opt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_fs_opt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 0, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             f[jH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  350 |             f[iH2][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |             f[iH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  409 |             f[jH2][0] += fHx;
      |               ^~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/fix_gpu.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_beck_gpu.cpp: In member function 'LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_beck_gpu.cpp:253:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  253 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_gpu.cpp: In member function 'LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_gpu.cpp:255:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  255 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:294:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  294 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:291:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  291 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:291:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:295:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp: In member function 'LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp:250:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp:262:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  262 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp:262:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  262 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_dsf_gpu.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_dpd_gpu.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gauss_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gauss_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_dpd_gpu.cpp: In member function 'LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_dpd_gpu.cpp:418:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  418 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj96_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj96_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj96_cut_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gauss_gpu.cpp: In member function 'LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gauss_gpu.cpp:243:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  243 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj96_cut_gpu.cpp:239:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  239 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp:247:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  247 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp:244:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp:251:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  251 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp:249:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  249 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:261:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  261 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  262 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:265:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  265 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:265:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  265 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:268:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  268 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  269 |             offset[itype][jtype];
      |             ~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:295:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:296:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  282 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:289:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:295:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp: In member function 'LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp:252:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp:248:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp:254:40: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                           ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp: In member function 'LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp:238:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  238 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp: In member function 'LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp:234:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  234 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp.o
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[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp: In member function 'LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp:245:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp: In member function 'LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:346:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:346:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:343:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  343 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:351:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp: In member function 'LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp:248:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp: In member function 'LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp:237:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp: In member function 'LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp:245:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
      |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp:250:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp: In member function 'LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp:350:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  350 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],fforce[2],
      |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  351 |                                       -r12[0],-r12[1],-r12[2]);
      |                                       ~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp: In member function 'LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp:236:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp: In member function 'LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp:325:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  325 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],
      |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  326 |                                       fforce[2],-r12[0],-r12[1],-r12[2]);
      |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:289:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:290:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  290 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:293:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  294 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:293:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp:248:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp: In member function 'LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp:315:15: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  315 |       f[i][2] += delz*fpair;
      |       ~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp:311:24: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  311 |       if (eflag) evdwl *= factor_lj;
      |                  ~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:366:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:364:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  364 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:362:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:362:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:362:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:371:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  371 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  372 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                                     ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:430:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  430 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  431 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:299:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  299 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:300:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  300 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:304:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  304 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:303:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:291:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  291 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:292:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:296:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:296:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:294:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  294 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:294:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:296:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:296:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_tip4p_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_tip4p_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_tip4p_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:330:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  330 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:335:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:339:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  339 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:332:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:332:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:339:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  339 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:318:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  318 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:323:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  323 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:327:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  327 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  328 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:320:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  320 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:320:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  320 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:296:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:291:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  291 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:300:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  300 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  301 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:306:34: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  306 |         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:306:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp:391:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  391 |       if (values.count() != file->nelements + 1)
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp:391:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  391 |       if (values.count() != file->nelements + 1)
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute<1, 1>(int, int, int*, int*, int**)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:351:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute<1, 0>(int, int, int*, int*, int**)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:351:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute<0, 0>(int, int, int*, int*, int**)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:351:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:324:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  324 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:329:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  329 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:333:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  334 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:326:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  326 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:326:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  326 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:297:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  297 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:294:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  294 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:294:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:298:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  298 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:398:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  399 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  400 |               rsq*rcutlj2inv +
      |               ~~~~~~~~~~~~~~~~
  401 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:400:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  400 |               rsq*rcutlj2inv +
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:393:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:391:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:393:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:391:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:398:71: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  399 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  400 |               rsq*rcutlj2inv +
      |               ~~~~~~~~~~~~~~                                           
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:338:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  338 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:339:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  339 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:343:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  343 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:342:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  342 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:319:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  319 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:319:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:321:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  321 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:321:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  321 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp: In member function 'init_pkg_lists':
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  908 | void _noopt LAMMPS::init_pkg_lists()
      |             ^
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_potential_file_reader.dir/test_potential_file_reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_potential_file_reader.cpp
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_atom.dir/build.make unittest/formats/CMakeFiles/test_dump_atom.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_atom.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_atom.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_atom.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_atom.dir/depend.internal".
Scanning dependencies of target test_dump_atom
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_atom.dir/build.make unittest/formats/CMakeFiles/test_dump_atom.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_dump_atom.dir/test_dump_atom.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_dump_atom.dir/test_dump_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_atom.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Built target test_utils
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/build.make unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/depend.internal".
Scanning dependencies of target test_eim_potential_file_reader
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/build.make unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/test_eim_potential_file_reader.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_eim_potential_file_reader.dir/test_eim_potential_file_reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_eim_potential_file_reader.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_atom.cpp: In member function 'std::string DumpAtomTest::convert_binary_to_text(std::string)':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_atom.cpp:66:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   66 |         system(cmdline.c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~
[ 98%] Linking CXX executable test_potential_file_reader
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_potential_file_reader.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_potential_file_reader.dir/test_potential_file_reader.cpp.o -o test_potential_file_reader  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
[ 98%] Linking CXX executable test_eim_potential_file_reader
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_eim_potential_file_reader.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_eim_potential_file_reader.dir/test_eim_potential_file_reader.cpp.o -o test_eim_potential_file_reader  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
[ 98%] Linking CXX executable test_dump_atom
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dump_atom.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_dump_atom.dir/test_dump_atom.cpp.o -o test_dump_atom  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Built target test_pair_unit_convert
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Built target test_eim_potential_file_reader
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_file_operations.dir/build.make unittest/formats/CMakeFiles/test_file_operations.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_file_operations.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_file_operations.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_file_operations.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_file_operations.dir/depend.internal".
Scanning dependencies of target test_file_operations
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_file_operations.dir/build.make unittest/formats/CMakeFiles/test_file_operations.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_file_operations.dir/test_file_operations.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_file_operations.dir/test_file_operations.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_file_operations.cpp
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_cfg.dir/build.make unittest/formats/CMakeFiles/test_dump_cfg.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_cfg.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_cfg.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_cfg.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_cfg.dir/depend.internal".
Scanning dependencies of target test_dump_cfg
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_cfg.dir/build.make unittest/formats/CMakeFiles/test_dump_cfg.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_dump_cfg.dir/test_dump_cfg.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_dump_cfg.dir/test_dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_cfg.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Built target test_potential_file_reader
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_file_operations.cpp: In member function 'virtual void FileOperationsTest_logmesg_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_file_operations.cpp:168:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  168 |     fread(buf, 1, 8, fp);
      |     ~~~~~^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_cfg.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h:40:13: warning: 'bool equal_lines(const string&, const string&)' defined but not used [-Wunused-function]
   40 | static bool equal_lines(const std::string &fileA, const std::string &fileB)
      |             ^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h:28:15: warning: 'size_t count_lines(const string&)' defined but not used [-Wunused-function]
   28 | static size_t count_lines(const std::string &filename)
      |               ^~~~~~~~~~~
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_atom_styles.dir/build.make unittest/formats/CMakeFiles/test_atom_styles.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_atom_styles.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_atom_styles.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_atom_styles.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_atom_styles.dir/depend.internal".
Scanning dependencies of target test_atom_styles
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_atom_styles.dir/build.make unittest/formats/CMakeFiles/test_atom_styles.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_atom_styles.dir/test_atom_styles.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_atom_styles.dir/test_atom_styles.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_atom_styles.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Built target test_dump_atom
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_custom.dir/build.make unittest/formats/CMakeFiles/test_dump_custom.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_custom.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_custom.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_custom.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/CMakeFiles/test_dump_custom.dir/depend.internal".
Scanning dependencies of target test_dump_custom
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_custom.dir/build.make unittest/formats/CMakeFiles/test_dump_custom.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_dump_custom.dir/test_dump_custom.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_dump_custom.dir/test_dump_custom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_atom_styles.cpp: In member function 'virtual void LAMMPS_NS::AtomStyleTest_atomic_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_atom_styles.cpp:394:10: warning: variable 'tag' set but not used [-Wunused-but-set-variable]
  394 |     auto tag = lmp->atom->tag;
      |          ^~~
[ 98%] Linking CXX executable test_dump_cfg
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dump_cfg.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_dump_cfg.dir/test_dump_cfg.cpp.o -o test_dump_cfg  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
[ 99%] Linking CXX executable test_file_operations
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_file_operations.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_file_operations.dir/test_file_operations.cpp.o -o test_file_operations  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp: In member function 'std::string DumpCustomTest::convert_binary_to_text(std::string)':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp:65:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   65 |         system(cmdline.c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h: At global scope:
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h:28:15: warning: 'size_t count_lines(const string&)' defined but not used [-Wunused-function]
   28 | static size_t count_lines(const std::string &filename)
      |               ^~~~~~~~~~~
[ 99%] Linking CXX executable test_dump_custom
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dump_custom.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_dump_custom.dir/test_dump_custom.cpp.o -o test_dump_custom  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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/usr/bin/gmake  -f unittest/commands/CMakeFiles/test_reset_ids.dir/build.make unittest/commands/CMakeFiles/test_reset_ids.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_reset_ids.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_reset_ids.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_reset_ids.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_reset_ids.dir/depend.internal".
Scanning dependencies of target test_reset_ids
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 99%] Building CXX object unittest/commands/CMakeFiles/test_reset_ids.dir/test_reset_ids.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_reset_ids.dir/test_reset_ids.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 99%] Built target test_dump_cfg
/usr/bin/gmake  -f unittest/commands/CMakeFiles/test_kim_commands.dir/build.make unittest/commands/CMakeFiles/test_kim_commands.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_kim_commands.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_kim_commands.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_kim_commands.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_kim_commands.dir/depend.internal".
Scanning dependencies of target test_kim_commands
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 99%] Building CXX object unittest/commands/CMakeFiles/test_kim_commands.dir/test_kim_commands.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_kim_commands.dir/test_kim_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_kim_commands.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp: In member function 'virtual void LAMMPS_NS::ResetIDsTest_TopologyData_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp:485:10: warning: variable 'num_dihedral' set but not used [-Wunused-but-set-variable]
  485 |     auto num_dihedral   = lmp->atom->num_dihedral;
      |          ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp:486:10: warning: variable 'num_improper' set but not used [-Wunused-but-set-variable]
  486 |     auto num_improper   = lmp->atom->num_improper;
      |          ^~~~~~~~~~~~
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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/usr/bin/gmake  -f unittest/commands/CMakeFiles/test_lattice_region.dir/build.make unittest/commands/CMakeFiles/test_lattice_region.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_lattice_region.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_lattice_region.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_lattice_region.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_lattice_region.dir/depend.internal".
Scanning dependencies of target test_lattice_region
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[ 99%] Building CXX object unittest/commands/CMakeFiles/test_lattice_region.dir/test_lattice_region.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_lattice_region.dir/test_lattice_region.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_lattice_region.cpp
[ 99%] Linking CXX executable test_kim_commands
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_kim_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_kim_commands.dir/test_kim_commands.cpp.o -o test_kim_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_reset_ids.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_reset_ids.dir/test_reset_ids.cpp.o -o test_reset_ids  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_lattice_region.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_lattice_region.dir/test_lattice_region.cpp.o -o test_lattice_region  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_simple_commands.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_simple_commands.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/CMakeFiles/test_simple_commands.dir/depend.internal".
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[ 99%] Building CXX object unittest/commands/CMakeFiles/test_simple_commands.dir/test_simple_commands.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_simple_commands.dir/test_simple_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_simple_commands.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[ 99%] Built target test_reset_ids
/usr/bin/gmake  -f unittest/c-library/CMakeFiles/test_library_config.dir/build.make unittest/c-library/CMakeFiles/test_library_config.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/CMakeFiles/test_library_config.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/CMakeFiles/test_library_config.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_HAS_EXCEPTIONS=1 -DLAMMPS_HAS_FFMPEG=0 -DLAMMPS_HAS_GZIP=1 -DLAMMPS_HAS_JPEG=1 -DLAMMPS_HAS_MANYBODY=1 -DLAMMPS_HAS_MPI=0 -DLAMMPS_HAS_PNG=1 -DLAMMPS_SMALLBIG -DNUM_LAMMPS_PACKAGES=57 -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_library_config.dir/test_library_config.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_config.cpp
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/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_simple_commands.dir/test_simple_commands.cpp.o -o test_simple_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
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/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_library_config.dir/test_library_config.cpp.o CMakeFiles/test_library_config.dir/test_main.cpp.o -o test_library_config  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a -lpthread 
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/CMakeFiles/test_library_properties.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/CMakeFiles/test_library_properties.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_library_properties.dir/test_library_properties.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_properties.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_properties.cpp: In member function 'virtual void LibraryProperties_global_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_properties.cpp:265:10: warning: unused variable 'i_ptr' [-Wunused-variable]
  265 |     int *i_ptr;
      |          ^~~~~
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_library_commands.dir/test_main.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_main.cpp
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/CMakeFiles/test_library_open.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/CMakeFiles/test_library_open.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/CMakeFiles/test_library_open.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_library_open.dir/test_library_open.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_open.cpp
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_library_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_library_properties.dir/test_library_properties.cpp.o CMakeFiles/test_library_properties.dir/test_main.cpp.o -o test_library_properties  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a -lpthread 
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_library_commands.dir/test_library_commands.cpp.o CMakeFiles/test_library_commands.dir/test_main.cpp.o -o test_library_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a -lpthread 
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_library_open.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_library_open.dir/test_library_open.cpp.o CMakeFiles/test_library_open.dir/test_main.cpp.o -o test_library_open  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a -lpthread 
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/cplusplus /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/test_input_class.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/test_input_class.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/test_input_class.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/test_input_class.dir/depend.internal".
Scanning dependencies of target test_input_class
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/usr/bin/gmake  -f unittest/cplusplus/CMakeFiles/test_input_class.dir/build.make unittest/cplusplus/CMakeFiles/test_input_class.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Building CXX object unittest/cplusplus/CMakeFiles/test_input_class.dir/test_input_class.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_input_class.dir/test_input_class.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/cplusplus/test_input_class.cpp
/usr/bin/gmake  -f unittest/cplusplus/CMakeFiles/test_lammps_class.dir/build.make unittest/cplusplus/CMakeFiles/test_lammps_class.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/cplusplus /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/test_lammps_class.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/test_lammps_class.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/test_lammps_class.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/CMakeFiles/test_lammps_class.dir/depend.internal".
Scanning dependencies of target test_lammps_class
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Building CXX object unittest/cplusplus/CMakeFiles/test_lammps_class.dir/test_lammps_class.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_lammps_class.dir/test_lammps_class.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/cplusplus/test_lammps_class.cpp
[100%] Linking CXX executable test_input_class
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_input_class.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_input_class.dir/test_input_class.cpp.o -o test_input_class  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgtest_main.a -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
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/usr/bin/gmake  -f unittest/fortran/CMakeFiles/test_fortran_commands.dir/build.make unittest/fortran/CMakeFiles/test_fortran_commands.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/test_fortran_commands.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/test_fortran_commands.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/test_fortran_commands.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/test_fortran_commands.dir/depend.internal".
Scanning dependencies of target test_fortran_commands
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/usr/bin/gmake  -f unittest/fortran/CMakeFiles/test_fortran_commands.dir/build.make unittest/fortran/CMakeFiles/test_fortran_commands.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Building Fortran object unittest/fortran/CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/f95 -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIE -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_commands.f90 -o CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_commands.f90: Warning: -D_FORTIFY_SOURCE not defined
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_commands.f90: Warning: -D_GLIBCXX_ASSERTIONS not defined
[100%] Linking CXX executable test_lammps_class
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_lammps_class.dir/link.txt --verbose=1
[100%] Building CXX object unittest/fortran/CMakeFiles/test_fortran_commands.dir/wrap_commands.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_fortran_commands.dir/wrap_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/wrap_commands.cpp
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_lammps_class.dir/test_lammps_class.cpp.o -o test_lammps_class  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock_main.a ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a -lpthread 
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/keepcmds.mod unittest/fortran/CMakeFiles/test_fortran_commands.dir/keepcmds.mod.stamp GNU
[100%] Linking CXX executable test_fortran_commands
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fortran_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_fortran_commands.dir/wrap_commands.cpp.o CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o -o test_fortran_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial libflammps.a ../../liblammps.so.0 libfmpi_stubs.a ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgtest_main.a -lpthread -lgfortran 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Built target test_input_class
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/test_fortran_create.dir/build.make unittest/fortran/CMakeFiles/test_fortran_create.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/test_fortran_create.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/test_fortran_create.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/test_fortran_create.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/CMakeFiles/test_fortran_create.dir/depend.internal".
Scanning dependencies of target test_fortran_create
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/test_fortran_create.dir/build.make unittest/fortran/CMakeFiles/test_fortran_create.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Building Fortran object unittest/fortran/CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/f95 -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIE -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90 -o CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90: Warning: -D_FORTIFY_SOURCE not defined
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90: Warning: -D_GLIBCXX_ASSERTIONS not defined
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90:77:0:
   77 | FUNCTION f_lammps_get_comm() BIND(C, name="f_lammps_get_comm")
      | 
Warning: Variable 'f_lammps_get_comm' at (1) may not be a C interoperable kind but it is BIND(C) [-Wc-binding-type]
[100%] Building CXX object unittest/fortran/CMakeFiles/test_fortran_create.dir/wrap_create.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_fortran_create.dir/wrap_create.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/wrap_create.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Built target test_lammps_class
/usr/bin/gmake  -f unittest/python/CMakeFiles/test_python_package.dir/build.make unittest/python/CMakeFiles/test_python_package.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python /builddir/build/BUILD/lammps-patch_29Oct2020/serial /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python/CMakeFiles/test_python_package.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python/CMakeFiles/test_python_package.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python/CMakeFiles/test_python_package.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python/CMakeFiles/test_python_package.dir/depend.internal".
Scanning dependencies of target test_python_package
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/gmake  -f unittest/python/CMakeFiles/test_python_package.dir/build.make unittest/python/CMakeFiles/test_python_package.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Building CXX object unittest/python/CMakeFiles/test_python_package.dir/test_python_package.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/STUBS -I/builddir/build/BUILD/lammps-patch_29Oct2020/serial/includes -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_python_package.dir/test_python_package.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/test_python_package.cpp
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/keepcreate.mod unittest/fortran/CMakeFiles/test_fortran_create.dir/keepcreate.mod.stamp GNU
[100%] Linking CXX executable test_fortran_create
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fortran_create.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_fortran_create.dir/wrap_create.cpp.o CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o -o test_fortran_create  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial libflammps.a ../../liblammps.so.0 libfmpi_stubs.a ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgtest_main.a -lpthread -lgfortran 
/usr/bin/cmake -E touch unittest/fortran/CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o.provides.build
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Built target test_fortran_commands
[100%] Linking CXX executable test_python_package
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_python_package.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_python_package.dir/test_python_package.cpp.o -o test_python_package  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
/usr/bin/cmake -E touch unittest/fortran/CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o.provides.build
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Built target test_fortran_create
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Built target test_python_package
[100%] Linking CXX executable test_atom_styles
cd /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_atom_styles.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld CMakeFiles/test_atom_styles.dir/test_atom_styles.cpp.o -o test_atom_styles  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/serial ../../liblammps.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
[100%] Built target test_atom_styles
gmake[1]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/serial'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeFiles 0
+ test -n ''
+ for mpi in '' mpich openmpi
+ test -n mpich
+ module load mpi/mpich-riscv64
++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-riscv64
+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-riscv64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-riscv64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-riscv64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-riscv64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-riscv64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-riscv64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-riscv64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-riscv64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-riscv64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-riscv64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=b2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1
++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-riscv64:1
++ export __LMOD_REF_COUNT_LOADEDMODULES
++ LOADEDMODULES=mpi/mpich-riscv64
++ export LOADEDMODULES
++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-riscv64:1;/usr/share/lmod/lmod/share/man:1'
++ export __LMOD_REF_COUNT_MANPATH
++ MANPATH=:/usr/share/man/mpich-riscv64:/usr/share/lmod/lmod/share/man
++ export MANPATH
++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1'
++ export __LMOD_REF_COUNT_MODULEPATH
++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
++ export MODULEPATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ MPI_COMPILER=mpich-riscv64
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/mpich-riscv64
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/mpich-riscv64
++ export MPI_MAN
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/mpich-riscv64
++ export MPI_SYSCONFIG
++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
++ export __LMOD_REF_COUNT_PATH
++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-riscv64:1
++ export __LMOD_REF_COUNT__LMFILES_
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-riscv64
++ export _LMFILES_
++ _ModuleTable001_=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
++ export _ModuleTable001_
++ _ModuleTable002_=b2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
++ export _ModuleTable002_
++ _ModuleTable_Sz_=2
++ export _ModuleTable_Sz_
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
++ test -z mpich
+ /usr/bin/cmake -S cmake -B mpich -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -C cmake/presets/all_on.cmake -C cmake/presets/nolib.cmake -DBLAS_LIBRARIES=-lflexiblas -DLAPACK_LIBRARIES=-lflexiblas -DCMAKE_TUNE_FLAGS= -DCMAKE_CUSTOM_LINKER=default -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DENABLE_TESTING=ON -DGTEST_URL=/builddir/build/SOURCES/release-1.10.0.tar.gz -DPYTHON_INSTDIR=/usr/lib/python3.9/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/lib64/mpich/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/mpich/lib -DLAMMPS_MACHINE=mpich -DLAMMPS_LIB_SUFFIX=mpich -DCMAKE_INSTALL_MANDIR=/usr/share/man/mpich-riscv64 -DBUILD_MPI=ON -DPKG_MPIIO=ON '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags'
loading initial cache file cmake/presets/all_on.cmake
loading initial cache file cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 10.2.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- Found MPI_CXX: /usr/lib64/mpich/lib/libmpicxx.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- The C compiler identification is GNU 10.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Found BLAS: -lflexiblas  
-- A library with LAPACK API found.
-- Found JPEG: /usr/lib64/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib64/libpng.so (found version "1.6.37") 
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.7.3") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.8
-- Found FFTW3: /usr/lib64/libfftw3.so  
-- Found Python: /usr/include/python3.9 (found version "3.9.0") found components: Development Development.Module Development.Embed 
-- Found VORO: /usr/lib64/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.1.3'
--   Found libkim-api, version 2.1.3
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- Found HDF5: /usr/lib64/libhdf5.so (found version "1.10.6")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib64/libOpenCL.so (found version "2.2") 
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/atom_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/beck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/born_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/born_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/born_coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/born_coul_wolf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/born_coul_wolf_cs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/buck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/buck_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/buck_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/charmm_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/coul_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/device_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/dipole_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/dipole_lj_sf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/dipole_long_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/dpd_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/eam_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/ellipsoid_nbor_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/gauss_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj96_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_class2_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_coul_msm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_cubic_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_expand_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_expand_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_gromacs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_sdk_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_sdk_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/lj_tip4p_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/mie_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/morse_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/neighbor_cpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/neighbor_gpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/pppm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/soft_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/sw_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/table_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/ufm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/vashishta_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/yukawa_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/yukawa_colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/gayberne_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/gayberne_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu/tersoff_mod_cl.h...
-- Generating style headers...
-- Generating package headers...
-- Generating lmpinstalledpkgs.h...
-- Found Python: /usr/bin/python3.9 (found version "3.9.0") found components: Interpreter 
-- Performing Test HAVE_LLD_LINKER_FLAG
-- Performing Test HAVE_LLD_LINKER_FLAG - Success
-- Performing Test HAVE_GOLD_LINKER_FLAG
-- Performing Test HAVE_GOLD_LINKER_FLAG - Success
-- Performing Test HAVE_BFD_LINKER_FLAG
-- Performing Test HAVE_BFD_LINKER_FLAG - Success
-- Downloading and building Google Test library
-- Looking for a Fortran compiler
-- Looking for a Fortran compiler - /usr/bin/f95
-- The Fortran compiler identification is GNU 10.2.1
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/bin/f95 - skipped
-- Checking whether /usr/bin/f95 supports Fortran 90
-- Checking whether /usr/bin/f95 supports Fortran 90 - yes
-- Found MPI_C: /usr/lib64/mpich/lib/libmpi.so (found version "3.1") 
-- Found MPI_Fortran: /usr/lib64/mpich/lib/libmpifort.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Python3: /usr/bin/python3.9 (found version "3.9.0") found components: Interpreter 
-- Could NOT find YAML (missing: YAML_LIBRARY YAML_INCLUDE_DIR) 
-- Skipping tests because libyaml is not found
-- Could NOT find ClangFormat (missing: ClangFormat_EXECUTABLE) (Required is at least version "8.0")
-- The following tools and libraries have been found and configured:
 * OpenMP
 * LAPACK
 * BLAS
 * JPEG
 * PNG
 * ZLIB
 * FFTW3
 * VORO
 * PkgConfig
 * HDF5
 * OpenCL
 * Python
 * MPI
-- <<< Build configuration >>>
   Operating System: Linux
   Build type:       
   Install path:     /usr
   Generator:        Unix Makefiles using /usr/bin/gmake
-- Enabled packages: ASPHERE;BODY;CLASS2;COLLOID;CORESHELL;DIPOLE;GPU;GRANULAR;KIM;KSPACE;MANYBODY;MC;MESSAGE;MISC;MLIAP;MOLECULE;MPIIO;OPT;PERI;POEMS;PYTHON;QEQ;REPLICA;RIGID;SHOCK;SNAP;SPIN;SRD;USER-ATC;USER-BOCS;USER-CGDNA;USER-CGSDK;USER-COLVARS;USER-DIFFRACTION;USER-DPD;USER-DRUDE;USER-EFF;USER-FEP;USER-H5MD;USER-MANIFOLD;USER-MEAMC;USER-MESODPD;USER-MGPT;USER-MISC;USER-MOFFF;USER-OMP;USER-PHONON;USER-PTM;USER-QTB;USER-REACTION;USER-REAXC;USER-SDPD;USER-SMTBQ;USER-SPH;USER-TALLY;USER-UEF;USER-YAFF;VORONOI
-- <<< Compilers and Flags: >>>
-- C++ Compiler:     /usr/bin/g++
      Type:          GNU
      Version:       10.2.1
      C++ Flags:    -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection 
      Defines:       LAMMPS_SMALLBIG;LAMMPS_MEMALIGN=64;LAMMPS_EXCEPTIONS;LAMMPS_OMP_COMPAT=4;LAMMPS_JPEG;LAMMPS_PNG;LAMMPS_GZIP;FFT_FFTW3;FFT_FFTW_THREADS;LMP_PYTHON;LMP_MPIIO;LMP_USER_OMP
-- Fortran Compiler: /usr/bin/f95
      Type:          
      Version:       
      Fortran Flags:-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules 
-- C compiler:       /usr/bin/gcc
      Type:          GNU
      Version:       10.2.1
      C Flags:      -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection 
-- <<< Linker flags: >>>
-- Executable name:  lmp_mpich
-- Executable linker flags: -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags
-- Shared library flags:    -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags
-- <<< MPI flags >>>
-- MPI_defines:      _GLIBCXX_ASSERTIONS
-- MPI includes:     /usr/include/mpich-riscv64
-- MPI libraries:    /usr/lib64/mpich/lib/libmpicxx.so;/usr/lib64/mpich/lib/libmpi.so;
-- <<< GPU package settings >>>
-- GPU API:          OPENCL
-- OpenCL tuning:    GENERIC
-- GPU precision:    MIXED
-- <<< FFT settings >>>
-- Primary FFT lib:  FFTW3
-- Using double precision FFTs
-- Using threaded FFTs
-- <<< Building Unit Tests >>>
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:
    CMAKE_CXX_FLAGS_RELEASE
    CMAKE_C_FLAGS_RELEASE
    CMAKE_Fortran_FLAGS_RELEASE
    INCLUDE_INSTALL_DIR
    LAMMPS_LIB_SUFFIX
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
-- Build files have been written to: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich
+ /usr/bin/cmake --build mpich -j4 --verbose
/usr/bin/cmake -S/builddir/build/BUILD/lammps-patch_29Oct2020/cmake -B/builddir/build/BUILD/lammps-patch_29Oct2020/mpich --check-build-system CMakeFiles/Makefile.cmake 0
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/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_YES -DZMQ_NO -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/cslib.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/cslib.cpp
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/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_YES -DZMQ_NO -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp
/usr/bin/gmake  -f CMakeFiles/comm.h.dir/build.make CMakeFiles/comm.h.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/comm.h.dir/DependInfo.cmake --color=
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp: In member function 'virtual void CSLIB_NS::MsgFile::recv(int&, int*&, int&, char*&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp:125:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  125 |   if (me == 0) fread(lengths,sizeof(int),2,fp);
      |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp:132:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  132 |   if (me == 0) fread(header,sizeof(int),nheader,fp);
      |                ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_file.cpp:135:21: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  135 |   if (me == 0) fread(buf,1,nbuf,fp);
      |                ~~~~~^~~~~~~~~~~~~~~
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/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_YES -DZMQ_NO -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_one.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_one.cpp
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/usr/bin/g++ -DLAMMPS_SMALLBIG -DMPI_YES -DZMQ_NO -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/STUBS_ZMQ -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/cslib.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_two.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_two.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src/msg_mpi_two.cpp: In member function 'void CSLIB_NS::MsgMPITwo::init(char*)':
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   60 |       fgets(port,MPI_MAX_PORT_NAME,fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/gcc  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -o CMakeFiles/h5md.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/src/ch5md.c.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/src/ch5md.c
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/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvar.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvar.cpp
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/usr/bin/cmake -DLAMMPS_DIR="/builddir/build/BUILD/lammps-patch_29Oct2020" -DGIT_EXECUTABLE="GIT_EXECUTABLE-NOTFOUND" -DGIT_FOUND="FALSE" -DLAMMPS_STYLE_HEADERS_DIR="/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles" -P /builddir/build/BUILD/lammps-patch_29Oct2020/cmake/Modules/generate_lmpgitversion.cmake
-- Git Directory: /builddir/build/BUILD/lammps-patch_29Oct2020/.git
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/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvaratoms.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvaratoms.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'void Lepton::CompiledExpression::compileExpression(const Lepton::ExpressionTreeNode&, std::vector<std::pair<Lepton::ExpressionTreeNode, int> >&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:91:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   91 |     for (int i = 0; i < node.getChildren().size(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
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  113 |             for (int i = 1; i < args.size(); i++)
      |                             ~~^~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp: In member function 'double Lepton::CompiledExpression::evaluate() const':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:170:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<double*, double*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  170 |     for (int i = 0; i < variablesToCopy.size(); i++)
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:175:29: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::Operation*>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  175 |     for (int step = 0; step < operation.size(); step++) {
      |                        ~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:180:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  180 |             for (int i = 0; i < args.size(); i++)
      |                             ~~^~~~~~~~~~~~~
[  2%] Building CXX object CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionProgram.cpp.o
/usr/bin/g++ -DLEPTON_BUILDING_STATIC_LIBRARY -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionProgram.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionProgram.cpp
[  2%] Building CXX object CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o
/usr/bin/g++ -DLEPTON_BUILDING_STATIC_LIBRARY -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/lepton.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const std::vector<Lepton::ExpressionTreeNode>&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:40:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   40 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   47 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   53 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   58 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_abf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_abf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:181:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  181 |             if (pos != tokens.size())
      |                 ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:190:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  190 |         if (pos != tokens.size())
      |             ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::__cxx11::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:201:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  201 |     if (pos == tokens.size())
      |         ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:227:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  227 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
      |             ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:241:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  241 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
      |             ~~~~^~~~~~~~~~~~~~~~
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/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  3%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_histogram.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_histogram.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_histogram.cpp
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/utils.h /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes/lammps/utils.h
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[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp
/usr/bin/gmake  -f CMakeFiles/info.h.dir/build.make CMakeFiles/info.h.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/info.h.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/info.h.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/info.h.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/info.h.dir/depend.internal".
Scanning dependencies of target info.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f CMakeFiles/info.h.dir/build.make CMakeFiles/info.h.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[  4%] Generating includes/lammps/info.h
/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/info.h /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes/lammps/info.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[  4%] Built target info.h
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  4%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_volmaps.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_volmaps.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_volmaps.cpp
[  5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp
[  5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvardeps.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvardeps.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvardeps.cpp
/usr/bin/gmake  -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/poems.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/poems.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/poems.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/poems.dir/depend.internal".
Scanning dependencies of target poems
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f CMakeFiles/poems.dir/build.make CMakeFiles/poems.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat4x4.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat4x4.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat4x4.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat6x6.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat6x6.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat6x6.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrix.cpp
/usr/bin/gmake  -f CMakeFiles/modify.h.dir/build.make CMakeFiles/modify.h.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/modify.h.dir/depend.internal".
Scanning dependencies of target modify.h
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/modify.h /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes/lammps/modify.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrixfun.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrixfun.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrixfun.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mixedjoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mixedjoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mixedjoint.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/norm.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/norm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/norm.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onbody.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onbody.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onbody.cpp
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp
[  7%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.h:36:13: warning: 'TreeNode::data' will be initialized after [-Wreorder]
   36 |         int data;
      |             ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.h:32:19: warning:   'TreeNode* TreeNode::left' [-Wreorder]
   32 |         TreeNode *left;
      |                   ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
   22 | TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
      | ^~~~~~~~
[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/revolutejoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/revolutejoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/revolutejoint.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rigidbody.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rigidbody.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rigidbody.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rowmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rowmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rowmatrix.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/solver.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/solver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/solver.cpp
/usr/bin/gmake  -f CMakeFiles/variable.h.dir/build.make CMakeFiles/variable.h.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/variable.h.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/variable.h.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/variable.h.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/variable.h.dir/depend.internal".
Scanning dependencies of target variable.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f CMakeFiles/variable.h.dir/build.make CMakeFiles/variable.h.dir/build
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.h /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes/lammps/variable.h
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[  8%] Built target variable.h
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp
[  8%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/sphericaljoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/sphericaljoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/sphericaljoint.cpp
[  8%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/system.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/system.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/system.cpp
[  8%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect3.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect3.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect3.cpp
[  8%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp
[  8%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect4.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect4.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect4.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
[  8%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect6.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect6.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect6.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  8%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualcolmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualcolmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualcolmatrix.cpp
[  8%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy.cpp
[  9%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualmatrix.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_replicas.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_replicas.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_replicas.cpp
[  9%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualrowmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualrowmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualrowmatrix.cpp
[  9%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_tcl.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_tcl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_tcl.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_volmaps.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_volmaps.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_volmaps.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript.cpp
[  9%] Linking CXX static library liblammps_poems_mpich.a
/usr/bin/cmake -P CMakeFiles/poems.dir/cmake_clean_target.cmake
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/usr/bin/ar qc liblammps_poems_mpich.a CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat4x4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat6x6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrixfun.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mixedjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/norm.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/revolutejoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rigidbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/solver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/sphericaljoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/system.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualcolmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualrowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp.o
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/gpu.dir/depend.internal".
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp
Scanning dependencies of target gpu
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:318:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:227:7: warning: unused variable 'ii' [-Wunused-variable]
  227 |   int ii, vstart=0, iend=_inum;
      |       ^~
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvartypes.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvartypes.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvartypes.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CbPotential.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CbPotential.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp
[ 12%] Linking CXX static library liblammps_colvars_mpich.a
/usr/bin/cmake -P CMakeFiles/colvars.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/colvars.dir/link.txt --verbose=1
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp
/usr/bin/ar qc liblammps_colvars_mpich.a CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvaratoms.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_abf.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_histogram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_meta.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_restraint.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_volmaps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvardeps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_replicas.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_tcl.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_volmaps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvartypes.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp.o
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/usr/bin/ranlib liblammps_colvars_mpich.a
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 12%] Built target colvars
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
/usr/bin/gmake  -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/ocl_get_devices.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles/ocl_get_devices.dir/depend.internal".
Scanning dependencies of target ocl_get_devices
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 12%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp.o
/usr/bin/g++ -DUCL_OPENCL  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp:25:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp: In instantiation of 'void LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, int, double**, int*, int*, int*, int**, bool, bool, bool, bool, int&, double, bool&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:398:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:271:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  271 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp: In instantiation of 'int** LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, double**, int*, double*, double*, tagint*, int**, tagint**, bool, bool, bool, bool, int&, int**, int**, double, bool&) [with numtyp = float; acctyp = double; tagint = int]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:398:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:340:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  340 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp
[ 12%] Linking CXX executable ocl_get_devices
/usr/bin/cmake -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp.o -o ocl_get_devices  /usr/lib64/libOpenCL.so 
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 12%] Built target ocl_get_devices
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronFlux.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronFlux.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatCapacity.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp
/usr/bin/gmake  -f unittest/CMakeFiles/googletest.dir/build.make unittest/CMakeFiles/googletest.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/CMakeFiles/googletest.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/CMakeFiles/googletest.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/CMakeFiles/googletest.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/CMakeFiles/googletest.dir/depend.internal".
Scanning dependencies of target googletest
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f unittest/CMakeFiles/googletest.dir/build.make unittest/CMakeFiles/googletest.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 12%] Creating directories for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-build
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/tmp
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-mkdir
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[ 12%] Performing download step (verify and extract) for 'googletest'
/usr/bin/cmake -P /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-download-.cmake
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
-- googletest download command succeeded.  See also /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-download-*.log
/usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-download
[ 12%] No update step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-update
[ 12%] No patch step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-patch
[ 12%] Performing configure step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-build && /usr/bin/cmake -P /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-configure-.cmake
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp
/usr/bin/gmake  -f unittest/utils/CMakeFiles/test_math_eigen_impl.dir/build.make unittest/utils/CMakeFiles/test_math_eigen_impl.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/utils /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/CMakeFiles/test_math_eigen_impl.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/CMakeFiles/test_math_eigen_impl.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/CMakeFiles/test_math_eigen_impl.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/CMakeFiles/test_math_eigen_impl.dir/depend.internal".
Scanning dependencies of target test_math_eigen_impl
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f unittest/utils/CMakeFiles/test_math_eigen_impl.dir/build.make unittest/utils/CMakeFiles/test_math_eigen_impl.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 12%] Building CXX object unittest/utils/CMakeFiles/test_math_eigen_impl.dir/test_math_eigen_impl.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils && /usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_math_eigen_impl.dir/test_math_eigen_impl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/utils/test_math_eigen_impl.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatFlux.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
-- googletest configure command succeeded.  See also /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-configure-*.log
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-configure
[ 12%] Performing build step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-build && /usr/bin/cmake -Dmake=/usr/bin/gmake -P /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-build-.cmake
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[ 12%] Linking CXX executable test_math_eigen_impl
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_math_eigen_impl.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_math_eigen_impl.dir/test_math_eigen_impl.cpp.o -o test_math_eigen_impl 
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 12%] Built target test_math_eigen_impl
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/flammps.dir/build.make unittest/fortran/CMakeFiles/flammps.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/flammps.dir/DependInfo.cmake --color=
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/flammps.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/flammps.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/flammps.dir/depend.internal".
Scanning dependencies of target flammps
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/flammps.dir/build.make unittest/fortran/CMakeFiles/flammps.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 12%] Building Fortran object unittest/fortran/CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran && /usr/bin/f95   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIC -c /builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90 -o CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90: Warning: -D_FORTIFY_SOURCE not defined
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90: Warning: -D_GLIBCXX_ASSERTIONS not defined
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/liblammps.mod unittest/fortran/CMakeFiles/flammps.dir/liblammps.mod.stamp GNU
[ 12%] Linking Fortran static library libflammps.a
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran && /usr/bin/cmake -P CMakeFiles/flammps.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/flammps.dir/link.txt --verbose=1
/usr/bin/ar qc libflammps.a CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o
/usr/bin/ranlib libflammps.a
/usr/bin/cmake -E touch unittest/fortran/CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o.provides.build
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 12%] Built target flammps
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp
-- googletest build command succeeded.  See also /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-build-*.log
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-build
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp
[ 13%] No install step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-build && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-install
[ 13%] No test step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-build && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-test
[ 13%] Completed 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/CMakeFiles
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/CMakeFiles/googletest-complete
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/googletest-prefix/src/googletest-stamp/googletest-done
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 13%] Built target googletest
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /usr/include/c++/10/cassert:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp:9:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp: In member function 'virtual void ATC::FE_3DMesh::partition_mesh()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp:2124:32: warning: comparison of integer expressions of different signedness: 'std::vector<std::vector<int> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
 2124 |     assert(procEltLists.size() >= nProcs);
      |            ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp: In member function 'LAMMPS_AL::CoulDSF<float, double>::init(int, int, int, int, int, double, double, _IO_FILE*, double, double*, double, double, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp:83:18: warning: 'MEM[(float * *)&host_write + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   83 |     host_write[i]=host_special_coul[i];
      |     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp: In member function 'LAMMPS_AL::CoulLongCS<float, double>::init(int, double**, int, int, int, int, double, double, _IO_FILE*, double, double*, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp:65:18: warning: 'MEM[(float * *)&host_write + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   65 |     host_write[i]=host_special_coul[i];
      |     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Array.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Array2D.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
  448 |   int eflag, vflag;
      |              ^~~~~
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp
[ 18%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:40,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h: In instantiation of 'int ucl_opencl::UCL_D_Vec<numtyp>::resize_ib(int) [with numtyp = int]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:245:20:   required from 'void LAMMPS_AL::LJ_TIP4PLong<numtyp, acctyp>::copy_relations_data(int, tagint*, int*, int, int*, int, int) [with numtyp = float; acctyp = double; tagint = int]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:384:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h:378:15: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  378 |     { if (cols>_cols) return resize(cols); else return UCL_SUCCESS; }
      |           ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h: In instantiation of 'int ucl_opencl::UCL_D_Vec<numtyp>::resize_ib(int) [with numtyp = _lgpu_float4]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:247:14:   required from 'void LAMMPS_AL::LJ_TIP4PLong<numtyp, acctyp>::copy_relations_data(int, tagint*, int*, int, int*, int, int) [with numtyp = float; acctyp = double; tagint = int]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:384:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h:378:15: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h: In instantiation of 'int ucl_opencl::UCL_D_Vec<numtyp>::resize_ib(int) [with numtyp = _lgpu_double4]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:206:31:   required from 'void LAMMPS_AL::LJ_TIP4PLong<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:384:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h:378:15: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseVector.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_kernel.h:27,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_texture.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp: In member function 'LAMMPS_AL::SW<float, double>::init(int, int, int, int, double, double, _IO_FILE*, int*, int, int***, int, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_map + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:144:18: note: 'MEM[(int * *)&dview_map + 24B]' was declared here
  144 |   UCL_H_Vec<int> dview_map(lj_types, *(this->ucl_device), UCL_WRITE_ONLY);
      |                  ^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_elem2param + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:129:18: note: 'MEM[(int * *)&dview_elem2param + 24B]' was declared here
  129 |   UCL_H_Vec<int> dview_elem2param(nelements*nelements*nelements,
      |                  ^~~~~~~~~~~~~~~~
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp: In instantiation of 'void LAMMPS_AL::Tersoff<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:330:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:260:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  260 |   if (nall*this->_max_nbors > _zetaij.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp: In instantiation of 'void LAMMPS_AL::TersoffMod<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:330:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:260:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  260 |   if (nall*this->_max_nbors > _zetaij.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp: In instantiation of 'void LAMMPS_AL::TersoffZBL<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:356:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:285:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  285 |   if (nall*this->_max_nbors > _zetaij.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp
[ 21%] Linking CXX static library liblammps_atc_mpich.a
/usr/bin/cmake -P CMakeFiles/atc.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/atc.dir/link.txt --verbose=1
/usr/bin/ar qc liblammps_atc_mpich.a CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CbPotential.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatCapacity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatFlux.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp.o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp.o
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp: In member function 'LAMMPS_AL::Vashishta<float, double>::init(int, int, int, int, double, double, _IO_FILE*, int*, int, int***, int, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_map + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:175:18: note: 'MEM[(int * *)&dview_map + 24B]' was declared here
  175 |   UCL_H_Vec<int> dview_map(lj_types, *(this->ucl_device), UCL_WRITE_ONLY);
      |                  ^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_elem2param + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:160:18: note: 'MEM[(int * *)&dview_elem2param + 24B]' was declared here
  160 |   UCL_H_Vec<int> dview_elem2param(nelements*nelements*nelements,
      |                  ^~~~~~~~~~~~~~~~
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/usr/bin/ranlib liblammps_atc_mpich.a
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 21%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_GLIBCXX_ASSERTIONS -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gpu -isystem /usr/include/mpich-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/atom.cpp: In member function 'LAMMPS_NS::Atom::data_atoms(int, char*, int, int, int, int, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/atom.cpp:1124:42: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1124 |       imx = utils::inumeric(FLERR,values[iptr],false,lmp);
      |                                          ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_brick.cpp: In member function 'LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_brick.cpp:703:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  703 |   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
      |                            ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_tiled.cpp: In member function 'LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_tiled.cpp:948:25: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  948 |           for (i = 0; i < nlast; i++) {
      |                       ~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_adf.cpp: In member function 'LAMMPS_NS::ComputeADF::init()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_adf.cpp:328:22: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  328 |     array[i][0] = x0 + (i+0.5) * deltax;
      |                   ~~~^~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp: In member function 'LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
  301 |           ptr[n] = 180.0*theta/MY_PI;
      |                    ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp:309:15: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  309 |           ivar++;
      |           ~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp:245:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
      |                                   ^~~~
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_centroid_stress_atom.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp: In member function 'LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:413:20: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
  413 |             ptr[n] = engrot;
      |             ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:410:20: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
  410 |             ptr[n] = engvib;
      |             ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:416:20: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             ptr[n] = engtrans;
      |             ~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:395:20: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
  395 |             ptr[n] = engpot;
      |             ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:235:18: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  235 |   double inertia,omegasq;
      |                  ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:422:20: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ptr[n] = vvib;
      |             ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:426:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |             ivar++;
      |             ~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:285:42: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  285 |         btype = onemols[imol]->bond_type[iatom][i];
      |                                          ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:285:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  285 |         btype = onemols[imol]->bond_type[iatom][i];
      |                         ^~~~
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_spread_atom.cpp.o
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cluster_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cluster_atom.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cna_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cna_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1521:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1521 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1522:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1522 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
      |                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1521:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1521 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1595:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1595 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1596:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1596 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
      |                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1595:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1595 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1700:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1700 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1701:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1701 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
      |                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1700:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1700 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                              ^
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:419:52: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  419 |         if (minflag[idim] == COORD) minvalue[idim] *= scale;
      |                                     ~~~~~~~~~~~~~~~^~~~~~~~
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com_chunk.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com_chunk.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_com_chunk.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_contact_atom.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_erotate_sphere.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_dihedral_local.cpp: In member function 'LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_dihedral_local.cpp:319:15: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  319 |           ivar++;
      |           ~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_dihedral_local.cpp:242:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  242 |         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
      |                                   ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_global_atom.cpp: In member function 'LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_global_atom.cpp:504:24: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |             if (j >= 0 && j < vmax) vector_atom[i] = source[j];
      |                 ~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_global_atom.cpp:443:24: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  443 |             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
      |                 ~~~~~~~^~~~~~~~~~~
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[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_ke_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_improper_local.cpp: In member function 'LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_improper_local.cpp:161:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
      |                                   ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_improper_local.cpp:217:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
  217 |           cbuf[n] = 180.0*acos(c)/MY_PI;
      |                 ^
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp: In member function 'LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp:253:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  253 |       scalar = (temperature->dof * boltz * t +
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  254 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
      |                 ~~~~~~~~~                     
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp: In member function 'LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp:308:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  308 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
      |                    ~~~~~~~~~~~^
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp: In member function 'LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:718:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  718 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
      |                                                ~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:718:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
  718 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
      |                        ~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp: In member function 'LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:271:66: warning: 'subsetseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
  271 |   if (subsetflag != NONE) ranlatt = new RanMars(lmp,subsetseed+me);
      |                                                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:267:40: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
  267 |     ranmol = new RanMars(lmp,molseed+me);
      |                                        ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/delete_bonds.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp: In member function 'LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp:518:13: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  518 |     atom->v = vhold;
      |     ~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp:517:13: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  517 |     atom->x = xhold;
      |     ~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp:519:17: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  519 |     atom->image = imagehold;
      |     ~~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp: In member function 'LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:883:38: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  883 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:883:21: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  883 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                     ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp: In member function 'LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:784:38: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  784 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:784:21: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  784 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                     ^~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_local.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_local.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_movie.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp: In member function 'LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp:1132:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1132 |                 (*ptr != 0.0 && value != 0.0))
      |                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp:629:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
  629 |     double *values;
      |             ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp:1141:42: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1141 |         for (i = 0; i < nlocal; i++, ptr += nstride) values[i] = *ptr;
      |                                      ~~~~^~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_xyz.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_xyz.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/error.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/error.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/error.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp: In member function 'LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:1010:33: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1010 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:1004:33: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1004 |             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:945:54: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  945 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:945:37: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  945 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
      |                                     ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:845:29: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
  845 |         image->draw_cylinder(pt3,pt1,color,tdiamvalue,3);
      |         ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:1010:33: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1010 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/finish.cpp: In member function 'LAMMPS_NS::Finish::end(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/finish.cpp:552:9: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
  552 |     tmp = MAX(nneigh,nneighfull);
/builddir/build/BUILD/lammps-patch_29Oct2020/src/finish.cpp:552:9: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp: In member function 'LAMMPS_NS::FixAdapt::change_settings()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp:628:33: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  628 |             if (scaleflag) q[i] *= scale;
      |                            ~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp:607:38: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  607 |             if (scaleflag) radius[i] *= scale;
      |                            ~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp: In member function 'LAMMPS_NS::FixAdapt::restore_settings()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp:709:43: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  709 |               else rmass[i] *= scale*scale*scale;
      |                                ~~~~~~~~~~~^~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_correlate.cpp: In member function 'LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_correlate.cpp:480:26: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  480 |     values[lastindex][i] = scalar;
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_box_relax.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp: In member function 'LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp:970:14: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
  970 |         else if (lengthone != length)
      |              ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp: In member function 'LAMMPS_NS::FixAveTime::invoke_scalar(long)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp:629:20: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  629 |     else vector[i] += scalar;
      |          ~~~~~~~~~~^~~~~~~~~
[ 29%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_controller.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_controller.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_controller.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp: In member function 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp:414:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
  414 |         if (i == 0) extarray = value;
      |                     ~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_balance.cpp: In member function 'LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_balance.cpp:298:53: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  298 |   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_neigh_history.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_neigh_history.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp: In member function 'LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp:842:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  842 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp:812:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  812 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp:782:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
      |                                             ~~~~~~~~~~~~~~~~^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_restrain.cpp: In member function 'LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_restrain.cpp:646:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  646 |   df1 = df1*cos_target[m] - ddf1*sin_target[m];
      |                             ~~~~^~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_vector.cpp: In member function 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_vector.cpp:149:14: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |     extarray = finalvalue;
      |     ~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_vector.cpp:138:10: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |     else if (value != finalvalue)
      |          ^~
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_harmonic.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp: In member function 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp:63:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   63 |       int newwall;
      |           ^~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmtlib_os.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmtlib_os.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_reflect.cpp: In member function 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_reflect.cpp:57:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   57 |       int newwall;
      |           ^~~~~~~
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[ 33%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/image.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/image.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/image.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/image.cpp: In member function 'LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/image.cpp:517:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  517 |           bool xin = ((surface[0]+tdir[0]) >= -radius) &&
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp: In function 'MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:7: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:33: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |         ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:20: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |         ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |         ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:187:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |   p[3] = c_phi*p[3] + s_phi*kp[3];
      |                       ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:186:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |   p[2] = c_phi*p[2] + s_phi*kp[2];
      |                       ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:185:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |   p[1] = c_phi*p[1] + s_phi*kp[1];
      |                       ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:184:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |   p[0] = c_phi*p[0] + s_phi*kp[0];
      |                       ~~~~~^~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire.cpp: In member function 'LAMMPS_NS::MinFire::iterate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire.cpp:439:46: warning: 'scale2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  439 |             v[i][0] = scale1*v[i][0] + scale2*f[i][0];
      |                                        ~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire.cpp:344:38: warning: 'scale1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  344 |             v[i][2] = scale1*v[i][2] + scale2*f[i][2];
      |                       ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/molecule.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/molecule.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp: In member function 'LAMMPS_NS::LAMMPS::LAMMPS(int, char**, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp:183:14: warning: 'wlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |   int wfirst,wlast;
      |              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp:183:7: warning: 'wfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |   int wfirst,wlast;
      |       ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_atomonly.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp: In member function 'LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp:1681:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1681 |     if (newtflag) {
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp: In member function 'LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp:1793:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1793 |     if (newtflag) {
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp: In member function 'LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp:101:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  102 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  103 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp:101:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp:101:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp: In member function 'LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp:107:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  108 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  109 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp:107:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp:107:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_atomonly_newton.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp: In member function 'LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:102:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  102 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  103 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  104 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:102:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  102 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:102:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  102 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:88:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   88 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp: In member function 'LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp:108:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  109 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  110 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp:108:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp:108:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp: In member function 'LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp:101:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  102 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  103 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp:101:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp:101:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp:105:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  105 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  106 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  107 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp:105:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  105 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp:105:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  105 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp:113:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  115 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp:113:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp:113:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp:137:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  138 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  139 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp:137:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp:137:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp:111:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp:111:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp:111:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp:112:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp:112:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp: In member function 'LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp:145:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  146 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  147 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp:145:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp:145:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp: In member function 'LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  122 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp:120:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp:120:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:103:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  103 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  104 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  105 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:103:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  103 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:103:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  103 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   89 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:112:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:112:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:98:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   98 |         if (includegroup && !(mask[j] & bitmask)) continue;
      |                              ~~~~~~~~~^~~~~~~~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp: In member function 'LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:120:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  122 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:120:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:120:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   90 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:148:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:129:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  130 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  131 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:129:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:129:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:148:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:70:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:70:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:70:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:71:16: note: 'ipage_middle' was declared here
   71 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp: In member function 'LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:194:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:175:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  177 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:175:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:175:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:149:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:69:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   69 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:69:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   69 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:69:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   69 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:70:16: note: 'ipage_middle' was declared here
   70 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp: In member function 'LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:156:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:137:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  138 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  139 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:137:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:137:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:156:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:70:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:70:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:70:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:71:16: note: 'ipage_middle' was declared here
   71 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:144:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:127:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  127 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  128 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  129 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:127:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  127 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:127:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  127 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:144:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:74:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   74 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:75:16: note: 'ipage_middle' was declared here
   75 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:113:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton_tri.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp: In member function 'LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:164:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  164 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:146:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  147 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  148 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:146:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:146:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:164:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  164 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:77:16: note: 'ipage_middle' was declared here
   77 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:76:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   76 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:116:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newton.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_halffull_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_halffull_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_halffull_newtoff.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_halffull_newton.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp:77:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   77 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newton.cpp: In member function 'LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newton.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   80 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
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[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size.cpp.o
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[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size_off2on.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size_off2on.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size_off2on.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size_off2on_oneside.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp: In member function 'LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp:150:26: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  150 |       numneigh_middle[i] = n_middle;
      |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:74:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   74 |     ndatum += n;
      |     ~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp:61:16: note: 'ipage_middle' was declared here
   61 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp: In member function 'LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:398:30: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |         ftable[i] = qqrd2e/r * fgamma;
      |                     ~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:399:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |         etable[i] = qqrd2e/r * egamma;
      |                     ~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:401:39: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  401 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
      |                                ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:401:39: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:401:49: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  401 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
      |                                         ~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp: In member function 'LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:1763:24: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1763 |   if (atom->q) atom->q = q_hold;
      |                ~~~~~~~~^~~~~~~~
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[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck.cpp.o
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[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp: In member function 'LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:487:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  487 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:488:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  487 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  488 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:482:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  482 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                            ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:483:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  483 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:482:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  482 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                            ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp: In member function 'LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:166:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:162:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:163:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  163 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:167:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:162:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp: In member function 'LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:485:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  485 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:486:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  485 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  486 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:480:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  480 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:481:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:480:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  480 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp: In member function 'LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:169:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:166:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:170:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  170 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp: In member function 'LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:468:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:468:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                      ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp: In member function 'LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:147:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:147:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_debye.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_debye.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_dsf.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp: In member function 'LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp:317:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp:317:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |     phicoul = prefactor * (erfcc-e_shift*r);
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp:317:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp: In member function 'LAMMPS_NS::PairHybridOverlay::copy_svector(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp:148:36: warning: 'this_style' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |         svector[n++] = this_style->svector[l];
      |                        ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp: In member function 'LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp:73:8: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   73 |   arg[2+multflag] = arg[1];
      |       ~^~~~~~~~~
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid.cpp: In member function 'LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid.cpp:476:8: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
  476 |   arg[2+multflag] = arg[1];
      |       ~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp: In member function 'LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp:392:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |             fpair = factor_lj*forcelj*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp:395:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  395 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  396 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp: In member function 'LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:354:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  354 |     philj = epsilon[itype][jtype]*(PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                                    ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:352:46: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  352 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp: In member function 'LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:132:49: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |             evdwl = epsilon[itype][jtype]*(PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                                            ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:130:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp: In member function 'LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp:386:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  386 |             fpair = factor_lj*forcelj*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp:389:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  390 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:216:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  216 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  217 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:212:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:110:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  110 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  110 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:113:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp:453:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  453 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  454 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_expand.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_expand.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp:140:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  140 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  141 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:466:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  466 |     eng += phicoul;
      |     ~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  465 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                            ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:459:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  459 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  460 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:169:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:162:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp: In member function 'LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp:168:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  162 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp:436:44: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth_linear.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth_linear.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp:138:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:503:30: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  503 |         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:500:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  500 |     philj += ljsw5[itype][jtype];
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:492:29: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  492 |         tc*tc*tc * (coulsw3 + coulsw4*tc);
      |                    ~~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:159:49: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
      |                                        ~~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:169:38: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
      |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:166:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             evdwl += ljsw5[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:165:41: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  165 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                                         ^~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_morse.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_morse.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp: In member function 'LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:452:33: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  452 |     philj = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:449:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  450 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp: In member function 'LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:142:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  142 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:139:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  139 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  140 |                              lj4[itype][jtype]) - offset[itype][jtype];
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_soft.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp: In member function 'LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp:394:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  394 |             fpair = factor_mie*forcemie*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp:397:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  397 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  398 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_ufm.cpp.o
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[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_yukawa.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_yukawa.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp: In member function 'LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:1019:10: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1019 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
      |         ~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:1019:37: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1019 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
      |                                    ~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp: In member function 'LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:171:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:171:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:168:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp: In member function 'LAMMPS_NS::PairTable::read_table(LAMMPS_NS::PairTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:426:38: warning: 'rfile' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |     if (tb->rflag && fabs(rnew-rfile)/rfile > EPSILONR) rerror++;
      |                      ~~~~~~~~~~~~~~~~^~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zero.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zero.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/potential_file_reader.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/potential_file_reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/potential_file_reader.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp: In member function 'LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp:135:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  135 |               (sw3[itype][jtype] + sw4[itype][jtype]*t);
      |               ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp: In member function 'LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp:378:26: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |       (sw3[itype][jtype] + sw4[itype][jtype]*t);
      |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_park.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/random_park.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp: In member function 'LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:693:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
  693 |   vec[5] = kme + 1;
      |            ~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:692:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
  692 |   vec[4] = jme + 1;
      |            ~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:691:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
  691 |   vec[3] = ime + 1;
      |            ~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp: In member function 'LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:887:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
  887 |   return index;
      |          ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp: In member function 'LAMMPS_NS::RanMars::select_subset(long, int, int*, int*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp:219:38: warning: 'activeall[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  219 |       thresh = 1.0 * (nmark-ntarget) / activeall[mode];
      |                ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/read_data.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp: In member function 'LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp:577:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  577 |       if (readnumber == 2) MPI_Send(nullptr,0,MPI_INT,procpartner2,0,world);
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp:504:31: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |     if (me < procmid) hi[dim] = valuehalf;
      |                       ~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp: In member function 'LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp:1069:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |       if (readnumber == 2) MPI_Send(nullptr,0,MPI_INT,procpartner2,0,world);
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/reader.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::check_eof_magic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp:1198:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
 1198 |     fread(str,sizeof(char),n,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp: In member function 'LAMMPS_NS::ReadDump::seek(long, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp:309:19: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
  309 |     if (ntimestep < nrequest) ntimestep = -1;
      |         ~~~~~~~~~~^~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_native.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_native.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_xyz.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cone.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp: In member function 'LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp:191:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |       contact[i].delz = xorig[2] - zs;
      |                         ~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp:190:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |       contact[i].dely = xorig[1] - ys;
      |                         ~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp:189:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |       contact[i].delx = xorig[0] - xs;
      |                         ~~~~~~~~~^~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_deprecated.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_deprecated.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp: In member function 'LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp:335:14: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |   add_contact(0,x,xp,yp,zp);
      |   ~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp:335:14: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp:335:14: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_intersect.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_intersect.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_plane.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_plane.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_plane.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp: In member function 'LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp:717:16: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  717 |     add_contact(0,x,xp,yp,zp);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp:717:16: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp:717:16: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/set.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/set.cpp
[ 43%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/special.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp: In member function 'LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:56:10: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |   bigint start,stop;
      |          ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:147:27: warning: 'last' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |     for (int i = first; i <= last; i++) {
      |                         ~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:61:7: warning: 'first' may be used uninitialized in this function [-Wmaybe-uninitialized]
   61 |   int first,last;
      |       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:56:16: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |   bigint start,stop;
      |                ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/universe.cpp: In member function 'LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/universe.cpp:146:17: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |   MPI_Comm_split(uorig,0,key,&uworld);
      |   ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:712:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  712 |         fread(buf,1,64,fp);
      |         ~~~~~^~~~~~~~~~~~~
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/verlet.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/verlet.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp: In member function 'LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:536:61: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  536 |     if (ystyle == EQUAL) vy = input->variable->compute_equal(yvar);
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:541:61: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |     if (zstyle == EQUAL) vz = input->variable->compute_equal(zvar);
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:531:61: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  531 |     if (xstyle == EQUAL) vx = input->variable->compute_equal(xvar);
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:457:8: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  457 |     vz *= zscale;
      |     ~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:453:8: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  453 |     vy *= yscale;
      |     ~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:449:8: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |     vx *= xscale;
      |     ~~~^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:26:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp: In member function 'LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/memory.h:172:10: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |     sfree(array);
      |     ~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:165:12: note: 'vhold' was declared here
  165 |   double **vhold;
      |            ^~~~~
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_coeff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_coeff.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_data.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:4032:20: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4032 |     newtree->value = value;
      |     ~~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:4309:30: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4309 |     if (method == AVE) value /= nvec;
      |                        ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:4114:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4114 |     int index,nvec,nstride;
      |                    ^~~~~~~
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_dump.cpp.o
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_restart.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:2208:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2208 |       if (op == NOT && expect == ARG) {
      |       ^~
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_temp_asphere.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_temp_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_temp_asphere.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:3555:38: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3555 |       argstack[nargstack++] = value1 + value2*randomequal->gaussian();
      |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:3450:35: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3450 |       argstack[nargstack++] = sqrt(value1);
      |                               ~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:1005:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1005 |   double *vstore;
      |           ^~~~~~
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nh_asphere.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nh_asphere.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nh_asphere.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp:138:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |         inertia[0] = tbonus[tri[i]].inertia[0];
      |                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp:129:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |         length = lbonus[line[i]].length;
      |                                ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp:108:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nve_asphere_noforce.cpp:88:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
   88 |       shape = bonus[ellipsoid[i]].shape;
      |                                 ^
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp: In member function 'LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*) [3], double (*) [3], double (*) [3], double (*) [3], double (*) [3], double (*) [3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:726:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  726 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
      |                               ~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:725:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  725 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
      |                               ~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:724:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  724 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
      |                               ~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:726:30: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  726 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
      |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:725:30: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  725 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
      |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:724:30: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  724 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
      |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:726:45: warning: 'MEM[(double *)&dUr2 + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  726 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:725:45: warning: 'MEM[(double *)&dUr2 + 8B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  725 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:724:45: warning: 'MEM[(double *)&dUr2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  724 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:44: warning: 'MEM[(double *)&r12hat + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |                                            ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:573:10: note: 'MEM[(double *)&r12hat + 16B]' was declared here
  573 |   double r12hat[3];
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:643:27: warning: 'MEM[(double *)&r12hat + 8B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  643 |   dchi[1] = temp2*(iota[1]-temp1*r12hat[1]);
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:21: warning: 'MEM[(double *)&r12hat]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |          ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:573:10: note: 'MEM[(double *)&r12hat]' was declared here
  573 |   double r12hat[3];
      |          ^~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp: In member function 'LAMMPS_NS::PairGayBerne::gayberne_lj(int, int, double (*) [3], double (*) [3], double (*) [3], double*, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:44: warning: 'MEM[(double *)&r12hat + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |                                            ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:748:10: note: 'MEM[(double *)&r12hat + 16B]' was declared here
  748 |   double r12hat[3];
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:828:27: warning: 'MEM[(double *)&r12hat + 8B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  828 |   dchi[1] = temp2*(iota[1]-temp1*r12hat[1]);
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:21: warning: 'MEM[(double *)&r12hat]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |          ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:748:10: note: 'MEM[(double *)&r12hat]' was declared here
  748 |   double r12hat[3];
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_line_lj.cpp: In member function 'LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_line_lj.cpp:303:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  304 |                            evdwl,0.0,fpair,delx,dely,delz);
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_nparticle.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_nparticle.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp: In member function 'LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp:377:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  378 |                            evdwl,0.0,fpair,delx,dely,delz);
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_resquared.cpp: In member function 'LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_resquared.cpp:192:26: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |         if (eflag) evdwl = factor_lj*one_eng;
      |                    ~~~~~~^~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/compute_body_local.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/compute_body_local.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/compute_temp_body.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/compute_temp_body.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/compute_temp_body.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nh_body.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nh_body.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp: In member function 'LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp:213:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |   int nedges,nentries;
      |       ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polygon.cpp: In member function 'LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polygon.cpp:336:26: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
  336 |       vertex_against_wall(i, wall_pos, x, f, torque, side,
      |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  337 |                           contact_list, num_contacts, facc);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polygon.cpp:299:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  299 |         if (delr > eradi) dz = cylradius;
      |         ^~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polyhedron.cpp:331:28: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
  331 |         sphere_against_wall(i, wall_pos, side, vwall, x, v, f, angmom, torque);
      |         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/angle_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/angle_class2.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp: In member function 'LAMMPS_NS::PairBodyNparticle::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp:325:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  325 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  326 |                            evdwl,0.0,fpair,delx,dely,delz);
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/bond_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/bond_class2.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp: In member function 'LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp:107:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |   int nei,nej,iefirst,jefirst;
      |               ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp:107:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |   int nei,nej,iefirst,jefirst;
      |       ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp:106:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  106 |   int ni,nj,npi,npj,ifirst,jfirst;
      |                     ^~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/dihedral_class2.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:219:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  219 |       if (r > eradi + eradj + cut_inner) continue;
      |               ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:122:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
      |                                           ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:122:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
      |                                   ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:122:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
      |                     ^~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp: In member function 'LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp:814:15: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
  814 |       ev_tally(i1,i2,i3,i4,nlocal,newton_bond,eimproper,
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  815 |                fabcd[0],fabcd[2],fabcd[3],
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  816 |                delxAB,delyAB,delzAB,delxBC,delyBC,delzBC,
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  817 |                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp: In member function 'LAMMPS_NS::PairLJClass2::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp:395:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  395 |             fpair = factor_lj*forcelj*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp:398:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  399 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:465:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  465 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  466 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:465:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  465 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/fix_wall_colloid.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/fix_wall_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/fix_wall_colloid.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:145:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  146 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:145:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:942:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  942 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  943 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:942:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  942 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:935:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  935 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:935:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  935 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:938:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  938 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:933:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  933 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:541:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:516:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  516 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:541:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:541:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:544:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:544:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:181:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:186:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:189:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  190 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:189:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:183:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:183:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp: In member function 'LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp:77:26: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
   77 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
      |                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp:77:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
   77 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
      |                     ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp: In member function 'LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp:305:37: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
  305 |           Fbmag = prethermostat*sqrt(a_pu);
      |                                 ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp:93:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
   93 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
      |                     ^~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp: In member function 'LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp:541:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |   return factor_lj*phi;
      |                    ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp: In member function 'LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp:192:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |       f[i][2] += delz*fpair;
      |                  ~~~~^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_long_dipole_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_long_dipole_long.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_freeze.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  240 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:238:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  238 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:245:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  246 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                                     ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:300:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  300 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  301 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp: In member function 'LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:692:7: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  692 |   int ninserted_mols = ninserted_atoms / natom;
      |       ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:708:31: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  708 |       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
      |                               ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:660:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  660 |           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:503:22: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  503 |         coords[0][3] = radtmp;
      |         ~~~~~~~~~~~~~^~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_gran_hooke_history.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_gran_hooke_history.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp: In member function 'LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp:1205:24: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1205 |     F_pulloff = 3*MY_PI*coh*Reff;
      |                 ~~~~~~~^~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp: In member function 'LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1604:36: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1604 |       fs1 = -k_tangential*history[0] - damp_tangential*vtr1;
      |                           ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1493:13: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1493 |     t0 = coh*coh*R2*R2*E;
      |          ~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1493:20: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1493 |     t0 = coh*coh*R2*R2*E;
      |          ~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp: In member function 'LAMMPS_NS::PairGranular::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:403:19: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
  403 |           history = &allhistory[size_history*jj];
      |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:520:28: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
  520 |                 history[1] = Fscrit*fs2/fs + damp_tangential*vtr2;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:182:8: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |   int *touch,**firsttouch;
      |        ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:407:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |           F_pulloff = 3*MY_PI*coh*Reff;
      |                       ~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:240:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
  240 |       allhistory = firsthistory[i];
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:239:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
  239 |       touch = firsttouch[i];
      |                           ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole_spin.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole_spin.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp: In member function 'LAMMPS_NS::PairGranular::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1013:36: warning: 'tangential_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1013 |         tangential_coeffs[i][j][k] = tangential_coeffs[j][i][k] =
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1014 |           tangential_coeffs_one[k];
      |           ~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1013:36: warning: 'tangential_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1009:36: warning: 'tangential_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1009 |         tangential_coeffs[i][j][0] = tangential_coeffs[j][i][0] =
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1010 |           tangential_coeffs_one[0];
      |           ~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:994:36: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  994 |           FOURTHIRDS*mix_stiffnessE(Emod[i][j],Emod[i][j],
      |                      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
  995 |                                     poiss[i][j],poiss[i][j]);
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1000:32: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1000 |         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_disp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_disp.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d_wrap.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d_wrap.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d_wrap.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp:72:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   72 |   int i,total,length,offset,num;
      |         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp:72:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   72 |   int i,total,length,offset,num;
      |               ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp:72:22: warning: unused variable 'offset' [-Wunused-variable]
   72 |   int i,total,length,offset,num;
      |                      ^~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp: In member function 'LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:567:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:567:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  568 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:560:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:560:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:563:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  563 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:558:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  558 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp: In member function 'LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:241:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  241 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:241:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  241 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  242 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:237:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:236:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp: In member function 'LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:190:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:182:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:191:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:184:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp: In member function 'LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:182:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:179:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  179 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:178:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:183:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp: In member function 'LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1662:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1662 |                 v5sum += v5_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1661:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1661 |                 v4sum += v4_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1660:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                 v3sum += v3_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1659:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1659 |                 v2sum += v2_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1658:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1658 |                 v1sum += v1_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1657:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1657 |                 v0sum += v0_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp: In member function 'LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2013:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2013 |                 v5sum += v5_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2012:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2012 |                 v4sum += v4_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2011:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2011 |                 v3sum += v3_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2010:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2010 |                 v2sum += v2_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2009:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2009 |                 v1sum += v1_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2008:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2008 |                 v0sum += v0_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp: In member function 'LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:548:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:548:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                      ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:541:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:541:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:544:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:539:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  539 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp: In member function 'LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:193:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:185:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:190:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:193:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:187:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:187:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:236:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:236:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                      ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:232:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  232 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:231:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  231 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:178:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:175:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:174:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:178:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
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[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp: In member function 'LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:374:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:376:20: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  376 |     table = etable[itable] + fraction*detable[itable];
      |                    ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:376:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  376 |     table = etable[itable] + fraction*detable[itable];
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:374:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp: In member function 'LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:158:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  158 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:158:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:160:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:160:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp: In member function 'LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:198:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:200:20: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  200 |     table = etable[itable] + fraction*detable[itable];
      |                    ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:200:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  200 |     table = etable[itable] + fraction*detable[itable];
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:198:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp: In member function 'LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:138:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:138:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:140:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  140 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:140:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  140 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
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[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:971:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  971 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:963:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  963 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:963:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  963 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  966 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  961 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:546:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  546 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:519:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  519 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:546:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  546 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:546:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  546 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:200:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  200 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:204:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  204 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:204:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  204 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  514 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  506 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  506 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:509:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  509 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:504:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |       phicoul = prefactor*egamma;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:208:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:203:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  203 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:378:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:405:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |               forcecoul = prefactor * fgamma;
      |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1028 |       philj6 = -lj4[itype][jtype]*r6inv +
      |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1029 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1023:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1023 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1011:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1011 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1011:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1011 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1014:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1014 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1009:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1009 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:929:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  929 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  930 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:921:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  921 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:921:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  921 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:924:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  924 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:919:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  919 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:512:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  512 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:535:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:538:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  538 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:538:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  538 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:606:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:570:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  570 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:606:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:606:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:609:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:609:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:182:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:191:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  192 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:184:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  216 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  221 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:237:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |               evdwl6 = -lj4[itype][jtype]*r6inv +
      |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
  238 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:218:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  218 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:218:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  218 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:229:36: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  229 |               evdwl12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
      |                                    ^~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  465 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:459:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  459 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:454:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |       phicoul = prefactor*egamma;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:198:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:193:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:202:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  202 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  203 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:355:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  355 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:378:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               forcecoul = prefactor * fgamma;
      |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  354 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  381 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  381 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  410 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:412:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:405:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:404:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  404 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:348:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:347:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  347 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:412:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:448:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  448 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:441:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:440:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  440 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:384:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:383:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  383 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:448:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  448 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:714:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  714 |             f[jH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:710:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  710 |             f[jH1][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:683:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  683 |             f[iH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:679:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  679 |             f[iH1][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp: In member function 'LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:378:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:378:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:380:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:373:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:372:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  372 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:316:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  316 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:315:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  315 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:380:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:975:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  975 |             f[jH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:971:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  971 |             f[jH1][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:944:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  944 |             f[iH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:940:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  940 |             f[iH1][0] += fH[0];
      |               ^~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_cg.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_cg.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1416:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1416 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1415:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1415 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1345:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1345 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1344:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1344 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole_spin.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/fix_qeq_comb.cpp: In member function 'LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/fix_qeq_comb.cpp:162:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |   int i,ii,iloop,loopmax,inum,*ilist;
      |                                ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/fix_qeq_comb.cpp:162:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |   int i,ii,iloop,loopmax,inum,*ilist;
      |                          ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:1238:22: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1238 |             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
      |             ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:3906:24: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3906 |       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
      |                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:3946:26: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3946 |         if (k > 0) df[2] += c * kr * xn * yn * zn1;
      |                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:808:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  808 |           fpair = dC*dwij / rij;
      |                   ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:852:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  852 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:847:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  847 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:847:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  847 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:852:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  852 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:823:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  823 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:819:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  819 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:819:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  819 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:823:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  823 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:852:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  852 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:847:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  847 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:823:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  823 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:819:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  819 |           fpair1 = dC*dwikS*wkjS / rikS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:878:21: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  878 |             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:878:21: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_alloy.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp: In member function 'LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1672:56: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1672 |                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
      |                                   ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
 1673 |                         *-dis_jk[2]*r_ik*r_ik)/(r_ik*r_ik*r_jk*r_jk);
      |                         ~~~~~~~~~~~~~~~~~~~~~~          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1397:30: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1397 |             bt_sg[nb_jk].temp=temp_jk;
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1660:52: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
      |                                 ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1660:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
      |                                                     ~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1661:25: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1661 |                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
      |                         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:3386:20: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3386 |               else if(temp_kk==temp_ji&&setting==0) {
      |                    ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp: In member function 'LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp:2197:18: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2197 |             {com6+=prefac_ij2*pcrossk*dfc_k;}
      |              ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp: In member function 'LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp:1682:13: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1682 |      prady  += 1.0 *  btor[2] * bbtor * att_eng;
      |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp:1681:13: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1681 |      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
      |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_cd.cpp: In member function 'LAMMPS_NS::PairEAMCD::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_cd.cpp:390:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
  390 |           fpair += D_i * rhojp * t1;
      |                    ~~~~^~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp: In member function 'LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:201:9: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  201 |         if (emb > epsilon) {
      |         ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:292:29: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:292:29: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:292:29: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp: In member function 'LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:491:34: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  491 |   if (jlast >= 0) jlasttag = tag[jlast];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:489:34: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  489 |   if (jprev >= 0) jprevtag = tag[jprev];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:454:36: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |   for (jbond = 0; jbond < num_bond[jnext]; jbond++)
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:486:34: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  486 |   if (ilast >= 0) ilasttag = tag[ilast];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:484:34: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  484 |   if (iprev >= 0) iprevtag = tag[iprev];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:452:36: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
  452 |   for (ibond = 0; ibond < num_bond[inext]; ibond++)
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:413:24: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  413 |               angle_eng(jnextangletype,j,jnext,jlast);
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:412:24: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |               angle_eng(jangletype,jprev,j,jnext) -
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:411:24: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  411 |               angle_eng(inextangletype,i,inext,ilast) -
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:410:24: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  410 |               angle_eng(iangletype,iprev,i,inext) -
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:450:36: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
  450 |   for (jbond = 0; jbond < num_bond[j]; jbond++)
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_tfmc.cpp: In member function 'LAMMPS_NS::FixTFMC::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_tfmc.cpp:254:15: warning: 'masstotal' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |     group->xcm(igroup,masstotal,cm);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/pair_dsmc.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_gcmc.cpp: In member function 'LAMMPS_NS::FixGCMC::energy_full()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_gcmc.cpp:2293:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2293 |           if (imolecule == molecule[j]) continue;
      |           ^~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/compute_ti.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp: In member function 'LAMMPS_NS::ServerMC::loop()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:117:19: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |           x[m][2] = xold[2];
      |           ~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:116:19: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |           x[m][1] = xold[1];
      |           ~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:115:19: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  115 |           x[m][0] = xold[0];
      |           ~~~~~~~~^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:15:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/atom.h:356:50: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
  356 |     else if (map_style == 2) return map_find_hash(global);
      |                                     ~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:43:10: note: 'atomid' was declared here
   43 |   tagint atomid;
      |          ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp: In function 'xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp:1140:35: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1140 |         thiscoord[2] = receivebits(buf, bitsizeint[2]);
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp:1139:35: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1139 |         thiscoord[1] = receivebits(buf, bitsizeint[1]);
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp:1138:35: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1138 |         thiscoord[0] = receivebits(buf, bitsizeint[0]);
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_gld.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_gld.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_deposit.cpp: In member function 'LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_deposit.cpp:601:31: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  601 |       atom->nbonds += onemols[imol]->nbonds;
      |                               ^~~~
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_oneway.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp: In member function 'LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp:325:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  325 |         } else if (me == proc && i == iatom) {
      |                    ~~~~~~~~~~~^~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp: In member function 'LAMMPS_NS::FixTTM::read_initial_electron_temperatures(char const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp:362:32: warning: 'iznode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp:362:24: warning: 'iynode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp:362:16: warning: 'ixnode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                ^~~~~~
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[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/xdr_compat.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/xdr_compat.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp:478:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  478 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
      |                                           ~~~^~~~~~~~~~~~~~~~~~~~
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_data.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp:150:65: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             evdwl = e0nm[itype][jtype]*(mm[itype][jtype] *
      |                                        ~~~~~~~~~~~~~~~~~~~       
  150 |                                         r0n[itype][jtype]*rninv -
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~^
  151 |                                         nn[itype][jtype] *
      |                                         ~~~~~~~~~~~~~~~~~~       
  152 |                                         r0m[itype][jtype]*rminv) -
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~ 
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp:152:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  151 |                                         nn[itype][jtype] *
      |                                         ~~~~~~~~~~~~~~~~~~
  152 |                                         r0m[itype][jtype]*rminv) -
      |                                         ~~~~~~~~~~~~~~~~~^~~~~~
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:550:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  550 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:550:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  550 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:553:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  553 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:548:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:560:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
      |                                           ~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:183:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:188:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:193:57: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  194 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:194:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:185:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:185:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_cvff.cpp: In member function 'LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_cvff.cpp:207:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  207 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_cvff.cpp:206:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       p = 2.0 - p;
      |       ~~^~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:501:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  501 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:198:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  131 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  131 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:167:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/atom_vec_peri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/atom_vec_peri.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:533:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  533 |       philj6 = -lj4[itype][jtype]*r6inv +
      |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:528:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  528 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:195:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               evdwl6 = -lj4[itype][jtype]*r6inv +
      |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:187:36: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               evdwl12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
      |                                    ^~~~~
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_damage_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_damage_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_damage_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:336:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  336 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:335:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:279:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:259:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  259 |             f[iH1][0] += fH[0];
      |               ^~~
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:378:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:321:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  321 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:301:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  301 |             f[iH1][0] += fH[0];
      |               ^~~
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_plasticity_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_plasticity_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_plasticity_atom.cpp
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/fix_peri_neigh.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/pair_peri_eps.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp: In member function 'LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp:101:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |   double *theta;
      |           ^~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS/fix_poems.cpp: In member function 'LAMMPS_NS::FixPOEMS::readfile(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS/fix_poems.cpp:960:33: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  960 |     if (me == 0) nlen = readline(fp,&line,&maxline);
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp: In member function 'LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:310:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
  310 |     fbiasr = fbias / r0max / rmax;
      |              ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:310:12: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  310 |     fbiasr = fbias / r0max / rmax;
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:306:27: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  306 |     delx = x[imax][0] - x[jmax][0];
      |                           ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:306:14: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  306 |     delx = x[imax][0] - x[jmax][0];
      |              ^~~~
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/neb.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/neb.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp: In member function 'LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp:608:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  608 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
      |                                  ~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp:608:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp:608:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
  608 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
      |                                                        ~~^~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/prd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/prd.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp: In member function 'LAMMPS_NS::Hyper::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'biasoverlap' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:262:10: note: 'biasoverlap' was declared here
  262 |   double biasoverlap;
      |          ^~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'allghost_toofar' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:42: note: 'allghost_toofar' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |                                          ^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'rmaxeverbig' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:30: note: 'rmaxeverbig' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |                              ^~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'rmaxever' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:21: note: 'rmaxever' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |                     ^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'tbondbuild' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:10: note: 'tbondbuild' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |          ^~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'avebiasnow' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:260:42: note: 'avebiasnow' was declared here
  260 |   double maxbondperatom,neighbondperbond,avebiasnow;
      |                                          ^~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'neighbondperbond' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:260:25: note: 'neighbondperbond' was declared here
  260 |   double maxbondperatom,neighbondperbond,avebiasnow;
      |                         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'maxbondperatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:260:10: note: 'maxbondperatom' was declared here
  260 |   double maxbondperatom,neighbondperbond,avebiasnow;
      |          ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'maxbiascoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:63: note: 'maxbiascoeff' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                                                               ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'minbiascoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:50: note: 'minbiascoeff' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                                                  ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'avebiascoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:37: note: 'avebiascoeff' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                                     ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'avenbias' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:28: note: 'avenbias' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                            ^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'aveboost' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:19: note: 'aveboost' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                   ^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'nnewbond' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:10: note: 'nnewbond' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |          ^~~~~~~~
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/tad.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_ehex.cpp: In member function 'LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_ehex.cpp:198:40: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |      fshake = ((FixShake*) modify->fix[id_shake]);
      |                                        ^~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_npt_small.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_npt_small.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1507:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1507 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1502:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1502 |         lbonus[line[i]].theta = theta;
      |                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1486:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1486 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1430:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1430 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1429:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1429 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1429:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1429 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1652:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1652 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1639:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1639 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1601:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1601 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1600:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1600 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1600:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1600 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2248:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2248 |           radone = lbonus[line[i]].length;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, int*, int*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2318:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2318 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nve.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nve.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nve.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1836:8: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1836 |   int *inbody;
      |        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2128:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2128 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2045:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2045 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2110:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2110 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1422:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1422 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1417:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1417 |         lbonus[line[i]].theta = theta;
      |                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1402:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1402 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1560:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1560 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1547:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1547 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2408:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2408 |           radone = lbonus[line[i]].length;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::write_restart_file(char const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2680:22: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2680 |   if (me == 0) fclose(fp);
      |                ~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:483:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
  483 |   if (langflag) random = new RanMars(lmp,seed + comm->me);
      |                                                         ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/atom_vec_spin.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/atom_vec_spin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/atom_vec_spin.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2491:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2491 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/compute_spin.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/compute_spin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/compute_spin.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1985:8: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1985 |   int *inbody;
      |        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2270:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2270 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2185:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2185 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2252:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2252 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/fix_langevin_spin.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/fix_langevin_spin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/fix_langevin_spin.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp: In member function 'LAMMPS_NS::FixWallPiston::post_integrate()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp:287:36: warning: 'zlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
  287 |       if (zloflag && x[i][2] < zlo - roughoff) {
      |                                ~~~~^~~~~~~~~~
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/fix_nve_spin.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/fix_store_kim.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/fix_store_kim.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/fix_store_kim.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp: In member function 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp:53:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |       int newwall;
      |           ^~~~~~~
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_init.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_init.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_init.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_interactions.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_interactions.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_interactions.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_param.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_param.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_param.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2968:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2968 |       c1 = tbonus[tri[i]].c1;
      |                         ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2956:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2956 |       length = lbonus[line[i]].length;
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2940:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2940 |       shape = ebonus[ellipsoid[i]].shape;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:3051:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3051 |       inertia = tbonus[tri[i]].inertia;
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:3038:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3038 |       biglist[k].theta = lbonus[line[i]].theta;
      |                                        ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:3026:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3026 |       shape = ebonus[ellipsoid[i]].shape;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1019:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1019 |       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
      |                               ~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2589:55: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2589 |         double length3 = MathExtra::len3(tbonus[tri[i]].c3);
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2705:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2705 |           double length = lbonus[line[i]].length;
      |                                         ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2681:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2681 |           double *shape = ebonus[ellipsoid[i]].shape;
      |                                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1549:17: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1549 |       xbcoll[1] = xbcollfirst[1];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1548:17: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1548 |       xbcoll[0] = xbcollfirst[0];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1550:17: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1550 |       xbcoll[2] = xbcollfirst[2];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1547:17: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1547 |       xscoll[2] = xscollfirst[2];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1546:17: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1546 |       xscoll[1] = xscollfirst[1];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1545:17: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1545 |       xscoll[0] = xscollfirst[0];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1553:15: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1553 |       norm[2] = normfirst[2];
      |       ~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1552:15: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1552 |       norm[1] = normfirst[1];
      |       ~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1551:15: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1551 |       norm[0] = normfirst[0];
      |       ~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1580:12: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1580 |       else if (type != WALL)
      |            ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1579:49: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1579 |         force_torque(v[i],vsnew,xscoll,xbcoll,f[j],nullptr);
      |                                                 ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_property.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_property.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_property.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp.o
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[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_units.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:95:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
   95 |   char *varname, *function, *value;
      |         ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:95:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
   95 |   char *varname, *function, *value;
      |                   ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:95:30: warning: unused variable 'value' [-Wunused-variable]
   95 |   char *varname, *function, *value;
      |                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:101:10: warning: variable 'model_name' set but not used [-Wunused-but-set-variable]
  101 |   char * model_name;
      |          ^~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp:89:14: warning: unused variable 'result' [-Wunused-variable]
   89 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp:106:14: warning: unused variable 'result' [-Wunused-variable]
  106 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:141:14: warning: unused variable 'result' [-Wunused-variable]
  141 |   PyObject * result = PyEval_CallObject(py_init, nullptr);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:159:14: warning: unused variable 'result' [-Wunused-variable]
  159 |   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:177:14: warning: unused variable 'result' [-Wunused-variable]
  177 |   PyObject * result = PyEval_CallObject(py_final_integrate, nullptr);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:195:14: warning: unused variable 'result' [-Wunused-variable]
  195 |   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:214:14: warning: unused variable 'result' [-Wunused-variable]
  214 |   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:232:14: warning: unused variable 'result' [-Wunused-variable]
  232 |   PyObject * result = PyEval_CallObject(py_reset_dt, nullptr);
      |              ^~~~~~
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[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp: In constructor 'LAMMPS_NS::PythonImpl::PythonImpl(LAMMPS_NS::LAMMPS*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp:56:22: warning: 'void PyEval_InitThreads()' is deprecated [-Wdeprecated-declarations]
   56 |   PyEval_InitThreads();
      |                      ^
In file included from /usr/include/python3.9/Python.h:145,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_compat.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp:23:
/usr/include/python3.9/ceval.h:130:37: note: declared here
  130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
      |                                     ^~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_cfg_mpiio.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_cfg_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_cfg_mpiio.cpp
In file included from /usr/include/string.h:519,
                 from /usr/include/c++/10/cstring:42,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:12,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:19:
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpAtomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:384:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset [100, 107] is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpAtomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:387:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 108 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpAtomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:390:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 116 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpAtomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:393:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 120 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_xyz_mpiio.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_xyz_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_xyz_mpiio.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/restart_mpiio.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/restart_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/restart_mpiio.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI/compute_voronoi_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI/compute_voronoi_atom.cpp
In file included from /usr/include/string.h:519,
                 from /usr/include/c++/10/cstring:42,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:12,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:19:
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpCustomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:430:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset [100, 107] is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpCustomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:433:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 108 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpCustomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:436:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 116 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpCustomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:439:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 120 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC/fix_atc.cpp.o
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[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/fix_bocs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/fix_bocs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/fix_bocs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/fix_bocs.cpp: In member function 'int LAMMPS_NS::FixBocs::read_F_table(char*, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/fix_bocs.cpp:691:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  691 |     for (int i = 0; i < inputLines.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'LAMMPS_NS::ComputePressureBocs::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp:334:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |       scalar = (temperature->dof * boltz * t +
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  335 |                 virial[0] + virial[1] + virial[2]) / 3.0 *
      |                 ~~~~~~~~~                     
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'LAMMPS_NS::ComputePressureBocs::compute_vector()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp:396:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  396 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
      |                    ~~~~~~~~~~~^
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[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna_fene.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxrna2_fene.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxrna2_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxrna2_fene.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC/fix_atc.cpp:23:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp: In member function 'LAMMPS_NS::PairEDPD::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp:222:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  222 |           Q[j]    -= ( dQc - dQd + dQr );
      |                      ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp:222:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  222 |           Q[j]    -= ( dQc - dQd + dQr );
      |                        ~~~~^~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp: In function 'write_group(_IO_FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, int, _IO_FILE*, _IO_FILE*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp:121:7: warning: 'cols' may be used uninitialized in this function [-Wmaybe-uninitialized]
  121 |       if (j == cols) {
      |       ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp: In member function 'LAMMPS_NS::Group2Ndx::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp:171:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |     fclose(fp);
      |     ~~~~~~^~~~
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_saed.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/fix_colvars.cpp:563:33: warning: unused variable 'id' [-Wunused-variable]
  563 |     std::vector<int>           &id = *(proxy->modify_atom_ids());
      |                                 ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp: In member function 'LAMMPS_NS::Ndx2Group::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp:145:30: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |           tags = read_section(fp,num);
      |                  ~~~~~~~~~~~~^~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/atom_vec_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/atom_vec_dpd.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'LAMMPS_NS::FixSAEDVTK::invoke_vector(long)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:427:57: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
  427 |         snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
      |                                                         ^~  ~~~~~
In file included from /usr/include/stdio.h:866,
                 from /usr/include/mpich-riscv64/mpicxx.h:42,
                 from /usr/include/mpich-riscv64/mpi.h:2241,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:19:
/usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 31 and 158 bytes into a destination of size 128
   70 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   71 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'LAMMPS_NS::FixSAEDVTK::options(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:554:59: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
  554 |           snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
      |                                                           ^~  ~~~~~
In file included from /usr/include/stdio.h:866,
                 from /usr/include/mpich-riscv64/mpicxx.h:42,
                 from /usr/include/mpich-riscv64/mpi.h:2241,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:19:
/usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 31 and 158 bytes into a destination of size 128
   70 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   71 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd_atom.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_dpd_energy.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_rx.cpp:580:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  580 |     for (int i = 1; i < nu_bin.size(); ++i)
      |                     ~~^~~~~~~~~~~~~~~
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_dpd_fdt_energy.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:39: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |                   which = find_special(onemols[imol]->special[iatom],
      |                           ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  206 |                                        onemols[imol]->nspecial[iatom],
      |                                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  207 |                                        tag[j]-tagprev);
      |                                        ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |                   which = find_special(onemols[imol]->special[iatom],
      |                                                               ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |                   which = find_special(onemols[imol]->special[iatom],
      |                                                ^~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp:370:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  370 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
      |                                          ~~~~~^~~~~~~~~~~~~~~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp: In member function 'LAMMPS_NS::PairMultiLucy::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp:191:44: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
      |                                            ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp: In member function 'LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1227:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1227 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
      |                                ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1241:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1241 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
      |                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1220:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1220 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
      |                                ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1234:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1234 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
      |                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1227:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1227 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1241:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1241 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1220:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1220 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1234:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1234 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
      |     ^~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/compute_temp_drude.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1011:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1011 |     mixWtSite2old = fractionOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1012:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |     mixWtSite2 = fraction2;
      |     ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1016:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1016 |     mixWtSite2old = nMoleculesOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1017:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1017 |     mixWtSite2 = nMolecules2;
      |     ~~~~~~~~~~~^~~~~~~~~~~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude_transform.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp: In member function 'LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:578:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  578 |     mixWtSite2 = nMolecules2;
      |     ~~~~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:577:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  577 |     mixWtSite2old = nMoleculesOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:573:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  573 |     mixWtSite2 = fraction2;
      |     ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:572:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  572 |     mixWtSite2old = fractionOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_langevin_drude.cpp.o
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp: In member function 'LAMMPS_NS::PairCoulTT::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp:161:46: warning: 'dj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           dcoul = qqrd2e * ( -(q[i]+q[di])*q[dj] - q[di]*(q[j]+q[dj]) ) * scale[itype][jtype] * rinv;
      |                                              ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp:161:39: warning: 'di' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           dcoul = qqrd2e * ( -(q[i]+q[di])*q[dj] - q[di]*(q[j]+q[dj]) ) * scale[itype][jtype] * rinv;
      |                                       ^~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:234:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  233 |             if (drudetype[type[i]] != NOPOL_TYPE &&
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  234 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:235:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  235 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:198:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:235:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
  235 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  227 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:232:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  232 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:229:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  229 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:240:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  240 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  241 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:230:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  230 |               ecoul = qi*qj * table;
      |                       ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:229:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  229 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/fix_adapt_fep.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/fix_adapt_fep.cpp
[ 66%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp:365:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  365 |     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_long_soft.cpp:373:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_long_soft.cpp:374:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:963:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  963 |       (1.0/(denlj*denlj) - 1.0/denlj);
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:955:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  955 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:956:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  956 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:527:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  527 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
      |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:501:18: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  501 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
      |            ~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:496:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  496 |     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:187:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               (1.0/(denlj*denlj) - 1.0/denlj);
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:180:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:181:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:144:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:523:18: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  523 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
      |            ~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:517:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  517 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:516:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  516 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:159:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:160:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
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[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:498:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  498 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:493:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  493 |     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:149:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:145:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:909:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  909 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:901:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  901 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:902:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  902 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:492:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  492 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  508 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  509 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
      |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  508 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  508 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp:737:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  737 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:175:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:168:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:169:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_morse_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp:412:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  413 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD/dump_h5md.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD/dump_h5md.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD/dump_h5md.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:392:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:391:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:335:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:315:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  315 |             f[iH1][0] += fH[0];
      |               ^~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:360:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  360 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:359:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  359 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:303:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:283:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |             f[iH1][0] += fH[0];
      |               ^~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_nvt_manifold_rattle.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
  394 |    double f,dp;
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
  375 |  double alp = al,alm = al;
      |                  ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
  158 |   double x0,x1,dx,dr;
      |                   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:187:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  187 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:203:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  203 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:246:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  246 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:306:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  306 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:329:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  329 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  331 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:334:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  334 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:343:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  343 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:345:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  345 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  358 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:109:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  109 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  119 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:123:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  123 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC/meam_setup_done.cpp: In member function 'LAMMPS_NS::MEAM::phi_meam(double, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC/meam_setup_done.cpp:454:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |     rhobar2 = rho02 / rho_bkgd2 * G2;
      |               ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC/meam_setup_done.cpp:453:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  453 |     rhobar1 = rho01 / rho_bkgd1 * G1;
      |               ~~~~~~^~~~~~~~~~~
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:593:24: warning: unused variable 'mx' [-Wunused-variable]
  593 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
      |                        ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:593:27: warning: unused variable 'itag' [-Wunused-variable]
  593 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
      |                           ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:593:32: warning: unused variable 'jtag' [-Wunused-variable]
  593 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
      |                                ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:598:10: warning: unused variable 'nbc' [-Wunused-variable]
  598 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
      |          ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:598:20: warning: unused variable 'tbl' [-Wunused-variable]
  598 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
      |                    ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:598:30: warning: unused variable 'tbm' [-Wunused-variable]
  598 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
      |                              ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:599:13: warning: unused variable 'lmax_local' [-Wunused-variable]
  599 |   const int lmax_local = lmax;
      |             ^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:608:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
  608 |   double t0,t1;
      |          ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:608:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
  608 |   double t0,t1;
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:617:18: warning: unused variable 'tsort' [-Wunused-variable]
  617 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
      |                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:617:42: warning: unused variable 'tlookup' [-Wunused-variable]
  617 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
      |                                          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:619:10: warning: unused variable 'ntsort' [-Wunused-variable]
  619 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:619:36: warning: unused variable 'ntlookup' [-Wunused-variable]
  619 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
      |                                    ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:1837:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
 1837 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
      |         ^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:1837:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
 1837 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
      |                         ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 384))[6]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 384))[6]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 384))[6]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 384))[6]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 448))[7]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 448))[7]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 448))[7]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 448))[7]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: At global scope:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:575:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
  575 | static void tr_count(const double * restrict A,
      |             ^~~~~~~~
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_dipole.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_pressure_grem.cpp: In member function 'LAMMPS_NS::ComputePressureGrem::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_pressure_grem.cpp:85:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |       scalar = (temperature->dof * boltz * t +
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
   86 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
      |                 ~~~~~~~~~                     
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_momentum_chunk.cpp: In member function 'LAMMPS_NS::FixMomentumChunk::end_of_step()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_momentum_chunk.cpp:252:29: warning: 'ke_chunk_local' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |           ke_chunk_local[m] += rmass[i] *
      |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
  253 |             (v[i][0]*v[i][0] + v[i][1]*v[i][1] + v[i][2]*v[i][2]);
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_momentum_chunk.cpp:169:11: warning: 'ke_chunk_old' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |   double *ke_chunk_old,*ke_chunk_new,*ke_chunk_local,*factor;
      |           ^~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_region_ees.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_region_ees.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_cossq.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp: In member function 'LAMMPS_NS::FixTTMMod::read_initial_electron_temperatures(char const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp:581:32: warning: 'iznode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp:581:24: warning: 'iynode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp:581:16: warning: 'ixnode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp: In member function 'LAMMPS_NS::FixWallReflectStochastic::wall_particle(int, int, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp:253:9: warning: 'difftest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  253 |         if (difftest < wallaccom[m][dir]) {
      |         ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp: In member function 'LAMMPS_NS::FixWallReflectStochastic::FixWallReflectStochastic(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp:82:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |       int newwall;
      |           ^~~~~~~
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_distance.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_cosine_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_cosine_squared.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_diel.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_diel.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp: In member function 'LAMMPS_NS::PairAGNI::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:219:34: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  219 |     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
      |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:219:34: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:219:34: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp: In member function 'LAMMPS_NS::PairAGNI::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:459:62: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
  459 |     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
      |                                                              ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:455:14: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |       params[curparam].numeta = nwords-1;
      |              ^~~~~~~~
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[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_e3b.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulSlaterLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:302:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  302 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
      |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:305:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  305 |         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
      |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulSlaterLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  332 |     fread(&cut_coul,sizeof(double),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  333 |     fread(&lamda,sizeof(double),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  334 |     fread(&offset_flag,sizeof(int),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  335 |     fread(&mix_flag,sizeof(int),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:982:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  982 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  983 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:974:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  974 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:974:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  974 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:977:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  977 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:972:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  972 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:560:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:533:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  533 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:560:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:560:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:563:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  563 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:563:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  563 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_spline.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_sw_spline.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:278:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  278 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  279 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  280 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~~
  281 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:280:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  280 |               rsq*rcutlj2inv+
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:273:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  273 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:271:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  271 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:273:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  273 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:271:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  271 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:278:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  278 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  279 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  280 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~                                          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:623:11: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  623 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  624 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  625 |       rsq*rcutlj2inv+
      |       ~~~~~~~~~~~~~~~
  626 |       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:625:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  624 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  625 |       rsq*rcutlj2inv+
      |       ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:623:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  623 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  624 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  625 |       rsq*rcutlj2inv+
      |       ~~~~~~~~~~~~~~                                          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:618:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  618 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:616:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  616 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:13: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:618:13: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  618 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:616:13: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  616 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp: In member function 'LAMMPS_NS::PairLocalDensity::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp:492:19: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
  492 |         if (LD[k][index] <= rho_min[k]) {
      |                   ^~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/temper_npt.cpp: In member function 'LAMMPS_NS::TemperNPT::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/temper_npt.cpp:308:16: warning: 'boltz_factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  308 |         fprintf(universe->uscreen,"SWAP %d & %d: yes = %d,Ts = %d %d, PEs = %g %g, Bz = %g %g, vol = %g %g\n",
      |         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  309 |                me_universe,partner,swap,my_set_temp,partner_set_temp,
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  310 |                pe,pe_partner,boltz_factor,exp(boltz_factor), vol, vol_partner);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/angle_cosine_buck6d.cpp:179:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  179 |         evdwl = ebuck6d - offset[itype][jtype];
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/angle_cosine_buck6d.cpp:164:11: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  164 |     fpair = forcebuck6d * r32inv;
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:558:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  558 |     eng += phicoul;
      |     ~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:556:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  556 |     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
      |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:551:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  551 |     phibuck6d = ebuck6d - offset[itype][jtype];
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:192:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:194:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:187:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             evdwl = ebuck6d - offset[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp.o
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[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/third_order.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:211:42: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
  211 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:211:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  211 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                             ~~~~~~~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:211:42: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
  211 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:205:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |             evdwl = ebuck6d - offset[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:612:36: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
  612 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:612:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  612 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:612:36: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
  612 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:606:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |     phibuck6d = ebuck6d - offset[itype][jtype];
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_alloy_types.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp: In member function 'LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp:824:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
  824 |     indxr[i] = irow;
      |     ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp:787:9: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |   int i,icol,irow,j,k,l,ll,idr,idc;
      |         ^~~~
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_canonical_coloured.cpp.o
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[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp:206:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  206 |   if (atom_index < data->nlocal) {
      |       ~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp:223:11: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  223 |     if (j == atom_index)
      |         ~~^~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc.cpp
In file included from /usr/include/string.h:519,
                 from /usr/include/c++/10/cstring:42,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:12,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.h:27,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:18:
In function 'strncpy',
    inlined from 'LAMMPS_NS::FixBondReact::write_restart(_IO_FILE*)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:3617:12:
/usr/include/bits/string_fortified.h:91:34: warning: 'strncpy' specified bound 256 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_bonds.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_bonds.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp: In member function 'LAMMPS_NS::FixBondReact::limit_bond(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:2411:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2411 |     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
      |                                                                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:2388:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2388 |     delete [] temp_limit_glove;
      |               ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp: In member function 'LAMMPS_NS::FixBondReact::unlimit_bond()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:2432:8: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2432 |   int *i_statted_tags;
      |        ^~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_species.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_species.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_species.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'LAMMPS_NS::FixQEqReax::pre_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp:544:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |     qeq_time = t_end - t_start;
      |                ~~~~~~^~~~~~~~~
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_allocate.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp: In member function 'LAMMPS_NS::PairReaxC::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp:555:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  555 |     data->timing.nbrs = t_end - t_start;
      |                         ~~~~~~^~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_hydrogen_bonds.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_hydrogen_bonds.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_control.cpp:121:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  121 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_init_md.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_init_md.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:58:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   58 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:61:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   61 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:80:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   80 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:92:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   92 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:97:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   97 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:98:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   98 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:99:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   99 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:152:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  152 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:178:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  178 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:197:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  197 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:216:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  216 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:236:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  236 |       fgets( s, MAX_LINE, fp );
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:321:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  321 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:331:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  331 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:335:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  335 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:364:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  364 |       fgets(s,MAX_LINE,fp);
      |       ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:487:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  487 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:492:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  492 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:553:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  553 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:558:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  558 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:613:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  613 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:618:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  618 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:684:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  684 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:694:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  694 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_io_tools.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_list.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'LAMMPS_NS::FixRigidMeso::set_xv()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:330:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  330 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:329:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  329 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:329:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  329 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'LAMMPS_NS::FixRigidMeso::set_v()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:450:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  450 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:449:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:449:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp: In member function 'LAMMPS_NS::FixMesoMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp:705:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  705 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp:674:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  674 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp:643:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  643 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
      |                                             ~~~~~~~~~~~~~~~~^~~~
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/atom_vec_sph.cpp.o
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[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_e_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_e_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_e_atom.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_rho_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_rho_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:434:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  434 |   fgets(ptr,MAXLINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:437:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  437 |     fgets(ptr,MAXLINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:488:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  488 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:492:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  492 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:500:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  500 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:509:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  509 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:527:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  527 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:541:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  541 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:564:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  564 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:567:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  567 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:620:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  620 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:632:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  632 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:654:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  654 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:667:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  667 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:674:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  674 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:694:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  694 |     fgets(ptr,MAXLINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:697:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  697 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:707:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  707 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:718:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  718 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:721:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  721 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:726:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  726 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:734:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  734 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:737:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  737 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:744:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  744 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:747:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  747 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:757:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  757 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:760:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  760 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:765:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  765 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:791:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  791 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:794:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  794 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:802:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  802 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:812:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  812 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_t_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_t_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_t_atom.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph.cpp
[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph_stationary.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'LAMMPS_NS::PairSMTBQ::tabqeq()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:1458:43: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1458 |             ddij = aCoeff*(r- rc-nang) *(2+bCoeff*(r-rc-nang))*exp(bCoeff*r);
      |                                         ~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:1457:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1457 |           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
      |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'LAMMPS_NS::PairSMTBQ::Charge()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:2593:59: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2593 |     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
      |                                                           ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:2812:8: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2812 |     dt = t_end - t_init;
      |     ~~~^~~~~~~~~~~~~~~~
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF/fix_nh_uef.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF/compute_pressure_uef.cpp: In member function 'LAMMPS_NS::ComputePressureUef::compute_vector()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF/compute_pressure_uef.cpp:143:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  143 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
      |                    ~~~~~~~~~~~^
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:659:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  659 |     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
      |               ~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:693:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  693 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:676:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  676 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  677 |         offset[itype][jtype];
      |         ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:667:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  667 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:667:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  667 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:670:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  670 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:665:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |       phicoul = prefactor*erfc1;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:684:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  684 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
      |               ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  677 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:693:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  693 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  677 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  668 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  668 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:671:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  671 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:666:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  666 |       phicoul = prefactor*erfc1;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:684:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  684 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
      |               ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:185:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |             ecoul = prefactor*erfc1;
      |             ~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:190:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:212:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:195:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:203:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  203 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:187:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:187:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:188:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |             ecoul = prefactor*erfc1;
      |             ~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:193:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:214:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  214 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:23: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:205:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:190:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:190:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o
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[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:141:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:138:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  142 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp:141:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp:138:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  142 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:529:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  529 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:504:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:529:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  529 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:529:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  529 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:532:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  532 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:532:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  532 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:167:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:172:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:175:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:175:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:169:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:169:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:179:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  179 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:171:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:176:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:180:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:173:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:173:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_data.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:177:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:169:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:174:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:177:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:171:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:171:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:158:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  158 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:158:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:160:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:160:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_omp.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:524:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  524 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:501:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  501 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:524:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  524 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:524:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  524 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:527:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  527 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:527:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  527 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:170:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  170 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:175:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:178:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  179 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:172:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:172:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_nh_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_gromos_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_gromos_omp.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_harmonic_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp: In member function 'LAMMPS_NS::BondFENEOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp:141:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp: In member function 'LAMMPS_NS::BondFENEOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp:141:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'LAMMPS_NS::BondFENEExpandOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp:145:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'LAMMPS_NS::BondFENEExpandOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp:145:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_npt_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_npt_omp.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nve_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_v_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:678:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  678 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:665:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_v_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:678:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  678 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:665:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_v_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:678:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  678 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:665:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_class2_omp.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_qeq_reax_omp.cpp:346:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |     qeq_time = t_end - t_start;
      |                ~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_v_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:619:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  619 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:606:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_v_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:619:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  619 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:606:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_v_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:619:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  619 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:606:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_harmonic_omp.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_umbrella_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:236:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |       p = 2.0 - p;
      |       ~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:236:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |       p = 2.0 - p;
      |       ~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<0, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cossq_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_atomonly_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_atomonly_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp: In function 'LAMMPS_NS::NPairFullBinOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:111:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:49:10: note: 'tagprev' was declared here
   49 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:111:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:48:43: note: 'iatom' was declared here
   48 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:111:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:48:38: note: 'imol' was declared here
   48 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function 'LAMMPS_NS::NPairFullBinGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:117:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  118 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  119 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:117:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:43: note: 'iatom' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:117:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:38: note: 'imol' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp: In function 'LAMMPS_NS::NPairFullMultiOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:119:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  120 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:50:10: note: 'tagprev' was declared here
   50 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:119:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:49:46: note: 'iatom' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:119:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:49:41: note: 'imol' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp: In function 'LAMMPS_NS::NPairFullNsqOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:111:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:111:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:50:36: note: 'iatom' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:111:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:50:31: note: 'imol' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function 'LAMMPS_NS::NPairFullNsqGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:111:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:111:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:36: note: 'iatom' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:111:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:31: note: 'imol' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  117 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  118 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtoffGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  125 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  126 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  127 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
   55 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  125 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  125 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:148:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  149 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  150 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:10: note: 'tagprev' was declared here
   50 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:148:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:43: note: 'iatom' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:117:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:38: note: 'imol' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtonTriOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  123 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  124 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here
   50 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfMultiNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  157 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  158 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:119:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfMultiNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  123 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  124 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  125 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
   52 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  123 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  123 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function 'LAMMPS_NS::NPairHalfMultiNewtonTriOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  133 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  134 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here
   52 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfNsqNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here
   53 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here
   52 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here
   52 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function 'LAMMPS_NS::NPairHalfNsqNewtoffGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  122 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here
   56 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here
   55 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here
   55 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfNsqNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  131 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  132 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here
   52 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here
   51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here
   51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
      |                                         ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaBinNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  148 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  149 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
   56 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here
   55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here
   55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                 ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here
   55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                        ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
   58 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaBinNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  194 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here
   55 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:149:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                 ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:167:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                        ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:212:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaBinNewtonTriOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  155 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  156 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here
   55 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                 ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                        ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:22:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:74:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   74 |     ndatum += n;
      |     ~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here
   94 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaNsqNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  145 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  146 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here
   57 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here
   56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
      |                                               ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here
   56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here
   56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
      |                                 ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here
   59 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaNsqNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  164 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here
   58 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here
   57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here
   57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
      |                                                    ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here
   57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
      |                                           ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here
   60 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:178:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:178:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_wolf_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'LAMMPS_NS::PairLJCubicOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:150:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  150 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:147:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'LAMMPS_NS::PairLJCubicOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:150:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  150 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:147:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  160 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:19: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  160 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:19: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_expand_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebyeOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebyeOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSFOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  177 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSFOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  177 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulWolfOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulWolfOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:183:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             evdwl += ljsw5[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:183:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             evdwl += ljsw5[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'LAMMPS_NS::PairLJSmoothOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:154:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:152:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  152 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:149:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  150 |                              lj4[itype][jtype]) - offset[itype][jtype];
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'LAMMPS_NS::PairLJSmoothOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:154:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:152:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  152 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:149:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  150 |                              lj4[itype][jtype]) - offset[itype][jtype];
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_soft_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_ufm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_ufm_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp: In member function 'LAMMPS_NS::PairTableOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:184:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp: In member function 'LAMMPS_NS::PairTableOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:184:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp: In member function 'LAMMPS_NS::PairZBLOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp:149:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |               (sw3i[jtype] + sw4i[jtype]*t);
      |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp: In member function 'LAMMPS_NS::PairZBLOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp:149:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |               (sw3i[jtype] + sw4i[jtype]*t);
      |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp.o
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_poly_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  162 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  162 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:190:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:195:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:190:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:195:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_poly_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_colloid_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<0, 0, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:210:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  210 |         f[j].z -= delz*fpair;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       fztmp += delz*fpair;
      |                ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:210:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  210 |         f[j].z -= delz*fpair;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       fztmp += delz*fpair;
      |                ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:210:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  210 |         f[j].z -= delz*fpair;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       fztmp += delz*fpair;
      |                ~~~~^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hooke_history_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  256 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  261 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  262 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  256 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  261 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  262 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:171:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:172:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:171:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:172:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:189:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:184:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:193:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  194 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:189:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:184:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:193:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  194 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  462 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  462 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:416:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:412:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  357 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  353 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:416:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:412:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  357 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  353 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  439 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  439 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_adp_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1337:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1337 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1333:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1333 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1306:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1306 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1302:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1302 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1599:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1599 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1595:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1595 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1568:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1568 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1564:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1564 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp: In member function 'LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:1000:26: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1000 |             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
      |             ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_morse_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp: In member function 'LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:570:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  570 |           fpair = dC*dwij / rij;
      |                   ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:614:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:609:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:609:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:614:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:585:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  585 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:581:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:581:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:585:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  585 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:614:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:609:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:585:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  585 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:581:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |           fpair1 = dC*dwikS*wkjS / rikS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:640:25: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  640 |             v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr);
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:640:25: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_comb_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_alloy_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_fs_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eim_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_rebo_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_sw_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_sw_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_zbl_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_table_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_table_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_lps_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:405:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:401:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  401 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  342 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:376:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  376 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:372:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  372 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  313 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_pmb_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:249:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |             if (drudetype[type[i]] != NOPOL_TYPE &&
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  249 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |               ecoul = qi*qj * table;
      |                       ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  242 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  247 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:255:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  255 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  256 |               offseti[jtype];
      |               ~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:249:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |             if (drudetype[type[i]] != NOPOL_TYPE &&
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  249 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |               ecoul = qi*qj * table;
      |                       ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  242 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  247 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:255:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  255 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  256 |               offseti[jtype];
      |               ~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In function 'LAMMPS_NS::PairLJCutTholeLongOMP::compute(int, int) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:124:7: note: 'di_closest' was declared here
  124 |   int di_closest;
      |       ^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:123:13: note: 'dqi' was declared here
  123 |   double qj,dqi,dqj,dcoul,asr,exp_asr;
      |             ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:124:7: note: 'di_closest' was declared here
  124 |   int di_closest;
      |       ^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:123:13: note: 'dqi' was declared here
  123 |   double qj,dqi,dqj,dcoul,asr,exp_asr;
      |             ^~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:160:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:156:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:160:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:156:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:182:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:175:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:182:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:175:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:420:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  420 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:416:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:361:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  361 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:357:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  357 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_diel_omp.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:391:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:387:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  387 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:332:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:328:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  328 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp: In member function 'LAMMPS_NS::PairAGNIOMP::eval<1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp:158:38: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  158 |     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
      |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
  159 |                                       fxtmp,fytmp,fztmp,
      |                                       ~~~~~~~~~~~~~~~~~~
  160 |                                       delx,dely,delz,thr);
      |                                       ~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp:158:38: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp:158:38: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_edip_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gauss_cut_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSFOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~~
  291 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:290:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~                                          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSFOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~~
  291 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:290:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~                                          
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'LAMMPS_NS::PairReaxCOMP::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_reaxc_omp.cpp:223:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  223 |     data->timing.nbrs = t_end - t_start;
      |                         ~~~~~~^~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_hydrogen_bonds_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_nonbonded_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_nonbonded_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_nonbonded_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_v_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:964:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  964 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:951:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  951 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_v_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:964:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  964 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:951:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  951 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_v_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:964:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  964 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:951:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  951 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongOpt::eval<1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |                 ecoul = prefactor*erfc;
      |                 ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:23: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:32: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongOpt::eval<1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |                 ecoul = prefactor*erfc;
      |                 ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:23: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:32: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_opt.cpp.o
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_opt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_alloy_opt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_alloy_opt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 0, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             f[jH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  350 |             f[iH2][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |             f[iH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  409 |             f[jH2][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_fs_opt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_fs_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_fs_opt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 0, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             f[jH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  350 |             f[iH2][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |             f[iH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  409 |             f[jH2][0] += fHx;
      |               ^~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/fix_gpu.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_beck_gpu.cpp: In member function 'LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_beck_gpu.cpp:253:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  253 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_gpu.cpp: In member function 'LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_gpu.cpp:255:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  255 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:294:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  294 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:291:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  291 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:291:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:295:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp: In member function 'LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp:250:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp:262:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  262 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp:262:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  262 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_dsf_gpu.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_dpd_gpu.cpp: In member function 'LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_dpd_gpu.cpp:418:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  418 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gauss_gpu.cpp: In member function 'LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gauss_gpu.cpp:243:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  243 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj96_cut_gpu.cpp:239:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  239 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp:247:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  247 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp:244:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp:251:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  251 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp:249:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  249 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:261:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  261 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  262 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:265:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  265 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:265:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  265 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:268:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  268 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  269 |             offset[itype][jtype];
      |             ~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:295:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:296:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  282 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:289:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:295:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp: In member function 'LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp:252:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp:248:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp:254:40: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                           ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp: In member function 'LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp:238:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  238 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp: In member function 'LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp:234:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  234 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp: In member function 'LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp:245:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp: In member function 'LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:346:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:346:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:343:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  343 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:351:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp: In member function 'LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp:248:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp: In member function 'LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp:237:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp: In member function 'LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp:245:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
      |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp:250:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp: In member function 'LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp:350:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  350 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],fforce[2],
      |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  351 |                                       -r12[0],-r12[1],-r12[2]);
      |                                       ~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp: In member function 'LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp:325:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  325 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],
      |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  326 |                                       fforce[2],-r12[0],-r12[1],-r12[2]);
      |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp: In member function 'LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp:236:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:289:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:290:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  290 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:293:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  294 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:293:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp: In member function 'LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp:315:15: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  315 |       f[i][2] += delz*fpair;
      |       ~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp:311:24: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  311 |       if (eflag) evdwl *= factor_lj;
      |                  ~~~~~~^~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp:248:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:366:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:364:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  364 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:362:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:362:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:362:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:371:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  371 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  372 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                                     ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:430:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  430 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  431 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:299:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  299 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:300:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  300 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:304:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  304 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:303:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:291:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  291 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:292:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:296:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:296:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:294:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  294 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:294:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:296:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:296:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_tip4p_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_tip4p_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_tip4p_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:330:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  330 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:335:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:339:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  339 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:332:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:332:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:339:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  339 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:318:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  318 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:323:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  323 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:327:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  327 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  328 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:320:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  320 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:320:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  320 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:296:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:291:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  291 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:300:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  300 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  301 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:306:34: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  306 |         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:306:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_sw_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_tersoff_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_tersoff_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_tersoff_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp:391:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  391 |       if (values.count() != file->nelements + 1)
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp:391:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  391 |       if (values.count() != file->nelements + 1)
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute<1, 1>(int, int, int*, int*, int**)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:351:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute<1, 0>(int, int, int*, int*, int**)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:351:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute<0, 0>(int, int, int*, int*, int**)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:351:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:324:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  324 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:329:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  329 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:333:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  334 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:326:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  326 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:326:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  326 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:398:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  399 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  400 |               rsq*rcutlj2inv +
      |               ~~~~~~~~~~~~~~~~
  401 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:400:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  400 |               rsq*rcutlj2inv +
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:393:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:391:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:393:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:391:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:398:71: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  399 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  400 |               rsq*rcutlj2inv +
      |               ~~~~~~~~~~~~~~                                           
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -D_GLIBCXX_ASSERTIONS -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/mpich-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:297:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  297 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:294:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  294 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:294:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:298:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  298 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:338:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  338 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:339:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  339 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:343:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  343 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:342:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  342 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:319:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  319 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:319:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:321:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  321 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:321:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  321 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 97%] Linking CXX shared library liblammps_mpich.so
/usr/bin/cmake -E cmake_link_script CMakeFiles/lammps.dir/link.txt --verbose=1
/usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -shared -Wl,-soname,liblammps_mpich.so.0 -o liblammps_mpich.so.0 @CMakeFiles/lammps.dir/objects1.rsp  -Wl,-rpath,/usr/lib64/mpich/lib: /usr/lib64/libjpeg.so /usr/lib64/libpng.so /usr/lib64/libz.so /usr/lib64/libfftw3.so /usr/lib64/libfftw3_omp.so /usr/lib64/libpython3.9.so /usr/lib64/libvoro++.so liblammps_colvars_mpich.a liblammps_lepton_mpich.a libcsmpi.a -lm liblammps_poems_mpich.a liblammps_atc_mpich.a liblammps_h5md_mpich.a liblammps_gpu_mpich.a /usr/lib/gcc/riscv64-redhat-linux/10/libgomp.so /lib64/lp64d/libpthread.so /usr/lib/gcc/riscv64-redhat-linux/10/libatomic.so /usr/lib64/libkim-api.so -lflexiblas /usr/lib64/libhdf5.so /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so /usr/lib64/libOpenCL.so 
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp: In member function 'init_pkg_lists':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp:908:13: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without
  908 | void _noopt LAMMPS::init_pkg_lists()
      |             ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:384:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 8 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:387:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 8 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:390:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 4 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:393:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 4 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:430:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 8 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:433:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 8 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:436:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 4 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:439:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 4 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
/usr/bin/cmake -E cmake_symlink_library liblammps_mpich.so.0 liblammps_mpich.so.0 liblammps_mpich.so
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_potential_file_reader.dir/test_potential_file_reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_potential_file_reader.cpp
[ 98%] Linking CXX executable test_pair_unit_convert
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_pair_unit_convert.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_pair_unit_convert.dir/test_pair_unit_convert.cpp.o -o test_pair_unit_convert  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_atom.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_atom.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_atom.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_dump_atom.dir/test_dump_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_atom.cpp
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/build.make unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_eim_potential_file_reader.dir/depend.internal".
Scanning dependencies of target test_eim_potential_file_reader
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_eim_potential_file_reader.dir/test_eim_potential_file_reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_eim_potential_file_reader.cpp
[ 98%] Linking CXX executable test_potential_file_reader
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_potential_file_reader.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_potential_file_reader.dir/test_potential_file_reader.cpp.o -o test_potential_file_reader  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_atom.cpp: In member function 'std::string DumpAtomTest::convert_binary_to_text(std::string)':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_atom.cpp:66:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   66 |         system(cmdline.c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~
[ 98%] Linking CXX executable test_eim_potential_file_reader
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_eim_potential_file_reader.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_eim_potential_file_reader.dir/test_eim_potential_file_reader.cpp.o -o test_eim_potential_file_reader  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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[ 98%] Linking CXX executable test_dump_atom
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dump_atom.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_dump_atom.dir/test_dump_atom.cpp.o -o test_dump_atom  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_file_operations.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_file_operations.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_file_operations.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_file_operations.dir/test_file_operations.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_file_operations.cpp
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_cfg.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_cfg.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_cfg.dir/depend.internal".
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/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_file_operations.cpp: In member function 'virtual void FileOperationsTest_logmesg_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_file_operations.cpp:168:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  168 |     fread(buf, 1, 8, fp);
      |     ~~~~~^~~~~~~~~~~~~~~
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_atom_styles.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_atom_styles.dir/depend.internal".
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Scanning dependencies of target test_atom_styles
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[ 98%] Building CXX object unittest/formats/CMakeFiles/test_atom_styles.dir/test_atom_styles.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_atom_styles.dir/test_atom_styles.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_atom_styles.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_cfg.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h:40:13: warning: 'bool equal_lines(const string&, const string&)' defined but not used [-Wunused-function]
   40 | static bool equal_lines(const std::string &fileA, const std::string &fileB)
      |             ^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h:28:15: warning: 'size_t count_lines(const string&)' defined but not used [-Wunused-function]
   28 | static size_t count_lines(const std::string &filename)
      |               ^~~~~~~~~~~
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 98%] Built target test_dump_atom
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_custom.dir/build.make unittest/formats/CMakeFiles/test_dump_custom.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_custom.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_custom.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_custom.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/CMakeFiles/test_dump_custom.dir/depend.internal".
Scanning dependencies of target test_dump_custom
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_dump_custom.dir/test_dump_custom.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_dump_custom.dir/test_dump_custom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_atom_styles.cpp: In member function 'virtual void LAMMPS_NS::AtomStyleTest_atomic_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_atom_styles.cpp:394:10: warning: variable 'tag' set but not used [-Wunused-but-set-variable]
  394 |     auto tag = lmp->atom->tag;
      |          ^~~
[ 99%] Linking CXX executable test_file_operations
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_file_operations.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_file_operations.dir/test_file_operations.cpp.o -o test_file_operations  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
[ 99%] Linking CXX executable test_dump_cfg
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dump_cfg.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_dump_cfg.dir/test_dump_cfg.cpp.o -o test_dump_cfg  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp: In member function 'std::string DumpCustomTest::convert_binary_to_text(std::string)':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp:65:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   65 |         system(cmdline.c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h: At global scope:
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h:28:15: warning: 'size_t count_lines(const string&)' defined but not used [-Wunused-function]
   28 | static size_t count_lines(const std::string &filename)
      |               ^~~~~~~~~~~
[ 99%] Linking CXX executable test_dump_custom
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dump_custom.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_dump_custom.dir/test_dump_custom.cpp.o -o test_dump_custom  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 99%] Built target test_file_operations
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_reset_ids.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_reset_ids.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_reset_ids.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_reset_ids.dir/depend.internal".
Scanning dependencies of target test_reset_ids
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f unittest/commands/CMakeFiles/test_reset_ids.dir/build.make unittest/commands/CMakeFiles/test_reset_ids.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 99%] Building CXX object unittest/commands/CMakeFiles/test_reset_ids.dir/test_reset_ids.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_reset_ids.dir/test_reset_ids.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 99%] Built target test_dump_cfg
/usr/bin/gmake  -f unittest/commands/CMakeFiles/test_kim_commands.dir/build.make unittest/commands/CMakeFiles/test_kim_commands.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_kim_commands.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_kim_commands.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_kim_commands.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_kim_commands.dir/depend.internal".
Scanning dependencies of target test_kim_commands
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[ 99%] Building CXX object unittest/commands/CMakeFiles/test_kim_commands.dir/test_kim_commands.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_kim_commands.dir/test_kim_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_kim_commands.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp: In member function 'virtual void LAMMPS_NS::ResetIDsTest_TopologyData_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp:485:10: warning: variable 'num_dihedral' set but not used [-Wunused-but-set-variable]
  485 |     auto num_dihedral   = lmp->atom->num_dihedral;
      |          ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp:486:10: warning: variable 'num_improper' set but not used [-Wunused-but-set-variable]
  486 |     auto num_improper   = lmp->atom->num_improper;
      |          ^~~~~~~~~~~~
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_lattice_region.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_lattice_region.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_lattice_region.dir/depend.internal".
Scanning dependencies of target test_lattice_region
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_lattice_region.dir/test_lattice_region.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_lattice_region.cpp
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_kim_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_kim_commands.dir/test_kim_commands.cpp.o -o test_kim_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_reset_ids.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_reset_ids.dir/test_reset_ids.cpp.o -o test_reset_ids  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
[ 99%] Linking CXX executable test_lattice_region
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_lattice_region.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_lattice_region.dir/test_lattice_region.cpp.o -o test_lattice_region  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_simple_commands.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_simple_commands.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/CMakeFiles/test_simple_commands.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_simple_commands.dir/test_simple_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_simple_commands.cpp
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_config.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_config.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_config.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_HAS_EXCEPTIONS=1 -DLAMMPS_HAS_FFMPEG=0 -DLAMMPS_HAS_GZIP=1 -DLAMMPS_HAS_JPEG=1 -DLAMMPS_HAS_MANYBODY=1 -DLAMMPS_HAS_MPI=1 -DLAMMPS_HAS_PNG=1 -DLAMMPS_SMALLBIG -DNUM_LAMMPS_PACKAGES=58 -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_library_config.dir/test_library_config.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_config.cpp
[ 99%] Building CXX object unittest/c-library/CMakeFiles/test_library_config.dir/test_main.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_HAS_EXCEPTIONS=1 -DLAMMPS_HAS_FFMPEG=0 -DLAMMPS_HAS_GZIP=1 -DLAMMPS_HAS_JPEG=1 -DLAMMPS_HAS_MANYBODY=1 -DLAMMPS_HAS_MPI=1 -DLAMMPS_HAS_PNG=1 -DLAMMPS_SMALLBIG -DNUM_LAMMPS_PACKAGES=58 -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_library_config.dir/test_main.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_main.cpp
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_properties.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_properties.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_properties.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_library_properties.dir/test_library_properties.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_properties.cpp
[ 99%] Linking CXX executable test_simple_commands
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_simple_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_simple_commands.dir/test_simple_commands.cpp.o -o test_simple_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_library_config.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_library_config.dir/test_library_config.cpp.o CMakeFiles/test_library_config.dir/test_main.cpp.o -o test_library_config  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_properties.cpp: In member function 'virtual void LibraryProperties_global_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_properties.cpp:265:10: warning: unused variable 'i_ptr' [-Wunused-variable]
  265 |     int *i_ptr;
      |          ^~~~~
[ 99%] Building CXX object unittest/c-library/CMakeFiles/test_library_properties.dir/test_main.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_library_properties.dir/test_main.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_main.cpp
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_library_properties.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_library_properties.dir/test_library_properties.cpp.o CMakeFiles/test_library_properties.dir/test_main.cpp.o -o test_library_properties  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_commands.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_commands.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_commands.dir/depend.internal".
Scanning dependencies of target test_library_commands
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[100%] Building CXX object unittest/c-library/CMakeFiles/test_library_commands.dir/test_library_commands.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_library_commands.dir/test_library_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_commands.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_open.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_open.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_open.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/CMakeFiles/test_library_open.dir/depend.internal".
Scanning dependencies of target test_library_open
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_library_open.dir/test_library_open.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_open.cpp
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_library_commands.dir/test_main.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_main.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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[100%] Building CXX object unittest/c-library/CMakeFiles/test_library_open.dir/test_main.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_library_open.dir/test_main.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_main.cpp
/usr/bin/gmake  -f unittest/cplusplus/CMakeFiles/test_input_class.dir/build.make unittest/cplusplus/CMakeFiles/test_input_class.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/cplusplus /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/test_input_class.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/test_input_class.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/test_input_class.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/test_input_class.dir/depend.internal".
Scanning dependencies of target test_input_class
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Building CXX object unittest/cplusplus/CMakeFiles/test_input_class.dir/test_input_class.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_input_class.dir/test_input_class.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/cplusplus/test_input_class.cpp
[100%] Linking CXX executable test_library_commands
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_library_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_library_commands.dir/test_library_commands.cpp.o CMakeFiles/test_library_commands.dir/test_main.cpp.o -o test_library_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_library_open.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_library_open.dir/test_library_open.cpp.o CMakeFiles/test_library_open.dir/test_main.cpp.o -o test_library_open  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
[100%] Linking CXX executable test_input_class
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_input_class.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_input_class.dir/test_input_class.cpp.o -o test_input_class  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgtest_main.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/cplusplus /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/test_lammps_class.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/test_lammps_class.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/test_lammps_class.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/CMakeFiles/test_lammps_class.dir/depend.internal".
Scanning dependencies of target test_lammps_class
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_lammps_class.dir/test_lammps_class.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/cplusplus/test_lammps_class.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/test_fortran_commands.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/test_fortran_commands.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/test_fortran_commands.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/test_fortran_commands.dir/depend.internal".
Scanning dependencies of target test_fortran_commands
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Building Fortran object unittest/fortran/CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran && /usr/bin/f95 -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -I/usr/include/mpich-riscv64 -I/usr/lib64/gfortran/modules -I/usr/lib64/gfortran/modules/mpich -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_commands.f90 -o CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_commands.f90: Warning: -D_FORTIFY_SOURCE not defined
[100%] Building CXX object unittest/fortran/CMakeFiles/test_fortran_commands.dir/wrap_commands.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /usr/lib64/gfortran/modules -isystem /usr/lib64/gfortran/modules/mpich -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_fortran_commands.dir/wrap_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/wrap_commands.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Built target test_library_open
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/test_fortran_create.dir/build.make unittest/fortran/CMakeFiles/test_fortran_create.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/test_fortran_create.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/test_fortran_create.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/test_fortran_create.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/CMakeFiles/test_fortran_create.dir/depend.internal".
Scanning dependencies of target test_fortran_create
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/test_fortran_create.dir/build.make unittest/fortran/CMakeFiles/test_fortran_create.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Building Fortran object unittest/fortran/CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran && /usr/bin/f95 -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -I/usr/include/mpich-riscv64 -I/usr/lib64/gfortran/modules -I/usr/lib64/gfortran/modules/mpich -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90 -o CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90: Warning: -D_FORTIFY_SOURCE not defined
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90:77:0:
   77 | FUNCTION f_lammps_get_comm() BIND(C, name="f_lammps_get_comm")
      | 
Warning: Variable 'f_lammps_get_comm' at (1) may not be a C interoperable kind but it is BIND(C) [-Wc-binding-type]
[100%] Building CXX object unittest/fortran/CMakeFiles/test_fortran_create.dir/wrap_create.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /usr/lib64/gfortran/modules -isystem /usr/lib64/gfortran/modules/mpich -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_fortran_create.dir/wrap_create.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/wrap_create.cpp
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/keepcmds.mod unittest/fortran/CMakeFiles/test_fortran_commands.dir/keepcmds.mod.stamp GNU
[100%] Linking CXX executable test_fortran_commands
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fortran_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_fortran_commands.dir/wrap_commands.cpp.o CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o -o test_fortran_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib libflammps.a ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgtest_main.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpifort.so /usr/lib64/mpich/lib/libmpi.so -lpthread -lgfortran 
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/keepcreate.mod unittest/fortran/CMakeFiles/test_fortran_create.dir/keepcreate.mod.stamp GNU
[100%] Linking CXX executable test_fortran_create
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fortran_create.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_fortran_create.dir/wrap_create.cpp.o CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o -o test_fortran_create  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib libflammps.a ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgtest_main.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpifort.so /usr/lib64/mpich/lib/libmpi.so -lpthread -lgfortran 
[100%] Linking CXX executable test_lammps_class
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_lammps_class.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_lammps_class.dir/test_lammps_class.cpp.o -o test_lammps_class  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock_main.a ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
/usr/bin/cmake -E touch unittest/fortran/CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o.provides.build
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Built target test_fortran_commands
/usr/bin/gmake  -f unittest/python/CMakeFiles/test_python_package.dir/build.make unittest/python/CMakeFiles/test_python_package.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python /builddir/build/BUILD/lammps-patch_29Oct2020/mpich /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python/CMakeFiles/test_python_package.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python/CMakeFiles/test_python_package.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python/CMakeFiles/test_python_package.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python/CMakeFiles/test_python_package.dir/depend.internal".
Scanning dependencies of target test_python_package
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/gmake  -f unittest/python/CMakeFiles/test_python_package.dir/build.make unittest/python/CMakeFiles/test_python_package.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Building CXX object unittest/python/CMakeFiles/test_python_package.dir/test_python_package.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python -D_GLIBCXX_ASSERTIONS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/includes -isystem /usr/include/mpich-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -fexceptions -fasynchronous-unwind-tables -fstack-clash-protection -std=c++11 -o CMakeFiles/test_python_package.dir/test_python_package.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/test_python_package.cpp
/usr/bin/cmake -E touch unittest/fortran/CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o.provides.build
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Built target test_fortran_create
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Built target test_lammps_class
[100%] Linking CXX executable test_python_package
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_python_package.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_python_package.dir/test_python_package.cpp.o -o test_python_package  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Built target test_python_package
[100%] Linking CXX executable test_atom_styles
cd /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_atom_styles.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags -Wl,--as-needed -Wl,-rpath -Wl,/usr/lib64/mpich/lib -Wl,--enable-new-dtags CMakeFiles/test_atom_styles.dir/test_atom_styles.cpp.o -o test_atom_styles  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib ../../liblammps_mpich.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/mpich/lib/libmpicxx.so /usr/lib64/mpich/lib/libmpi.so -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
[100%] Built target test_atom_styles
gmake[1]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/mpich'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeFiles 0
+ test -n mpich
+ module unload mpi/mpich-riscv64
++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-riscv64
+ eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH
++ unset LD_LIBRARY_PATH
++ unset __LMOD_REF_COUNT_LOADEDMODULES
++ unset LOADEDMODULES
++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1
++ export __LMOD_REF_COUNT_MANPATH
++ MANPATH=/usr/share/lmod/lmod/share/man
++ export MANPATH
++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
++ export MODULEPATH
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
++ export __LMOD_REF_COUNT_PATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset __LMOD_REF_COUNT__LMFILES_
++ unset _LMFILES_
++ _ModuleTable001_=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
++ export _ModuleTable001_
++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=
++ export _ModuleTable002_
++ _ModuleTable_Sz_=2
++ export _ModuleTable_Sz_
+ for mpi in '' mpich openmpi
+ test -n openmpi
+ module load mpi/openmpi-riscv64
++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-riscv64
+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-riscv64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-riscv64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-riscv64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-riscv64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-riscv64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-riscv64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-riscv64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-riscv64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-riscv64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-riscv64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=aGFyZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1
++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-riscv64:1
++ export __LMOD_REF_COUNT_LOADEDMODULES
++ LOADEDMODULES=mpi/openmpi-riscv64
++ export LOADEDMODULES
++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-riscv64:1;/usr/share/lmod/lmod/share/man:1'
++ export __LMOD_REF_COUNT_MANPATH
++ MANPATH=:/usr/share/man/openmpi-riscv64:/usr/share/lmod/lmod/share/man
++ export MANPATH
++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
++ export MODULEPATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi-riscv64
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-riscv64
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-riscv64
++ export MPI_MAN
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-riscv64
++ export MPI_SYSCONFIG
++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
++ export __LMOD_REF_COUNT_PATH
++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-riscv64:1
++ export __LMOD_REF_COUNT__LMFILES_
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-riscv64
++ export _LMFILES_
++ _ModuleTable001_=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
++ export _ModuleTable001_
++ _ModuleTable002_=aGFyZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
++ export _ModuleTable002_
++ _ModuleTable_Sz_=2
++ export _ModuleTable_Sz_
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
++ test -z openmpi
+ /usr/bin/cmake -S cmake -B openmpi -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -C cmake/presets/all_on.cmake -C cmake/presets/nolib.cmake -DBLAS_LIBRARIES=-lflexiblas -DLAPACK_LIBRARIES=-lflexiblas -DCMAKE_TUNE_FLAGS= -DCMAKE_CUSTOM_LINKER=default -DPKG_PYTHON=ON -DPKG_VORONOI=ON -DPKG_USER-ATC=ON -DPKG_USER-H5MD=ON -DPKG_KIM=ON -DENABLE_TESTING=ON -DGTEST_URL=/builddir/build/SOURCES/release-1.10.0.tar.gz -DPYTHON_INSTDIR=/usr/lib/python3.9/site-packages -DCMAKE_INSTALL_SYSCONFDIR=/etc -DPKG_GPU=ON -DGPU_API=OpenCL -DBUILD_OMP=ON -DFFT=FFTW3 -DPKG_USER-INTEL=OFF -DCMAKE_INSTALL_BINDIR=/usr/lib64/openmpi/bin -DCMAKE_INSTALL_LIBDIR=/usr/lib64/openmpi/lib -DLAMMPS_MACHINE=openmpi -DLAMMPS_LIB_SUFFIX=openmpi -DCMAKE_INSTALL_MANDIR=/usr/share/man/openmpi-riscv64 -DBUILD_MPI=ON -DPKG_MPIIO=ON '-DCMAKE_EXE_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags' '-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags'
loading initial cache file cmake/presets/all_on.cmake
loading initial cache file cmake/presets/nolib.cmake
-- The CXX compiler identification is GNU 10.2.1
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Running check for auto-generated files from make-based build system
-- Found MPI_CXX: /usr/lib64/openmpi/lib/libmpi_cxx.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Looking for C++ include omp.h
-- Looking for C++ include omp.h - found
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- The C compiler identification is GNU 10.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Found BLAS: -lflexiblas  
-- A library with LAPACK API found.
-- Found JPEG: /usr/lib64/libjpeg.so (found version "62") 
-- Found PNG: /usr/lib64/libpng.so (found version "1.6.37") 
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.11") 
-- Found GZIP: /usr/bin/gzip  
-- Could NOT find FFMPEG (missing: FFMPEG_EXECUTABLE) 
-- Found PkgConfig: /usr/bin/pkg-config (found version "1.7.3") 
-- Checking for module 'fftw3'
--   Found fftw3, version 3.3.8
-- Found FFTW3: /usr/lib64/libfftw3.so  
-- Found Python: /usr/include/python3.9 (found version "3.9.0") found components: Development Development.Module Development.Embed 
-- Found VORO: /usr/lib64/libvoro++.so  
-- Could NOT find CURL (missing: CURL_LIBRARY CURL_INCLUDE_DIR) 
-- Checking for module 'libkim-api>=2.1.3'
--   Found libkim-api, version 2.1.3
-- Looking for C++ include cmath
-- Looking for C++ include cmath - found
-- Found HDF5: /usr/lib64/libhdf5.so (found version "1.10.6")  
-- Looking for CL_VERSION_2_2
-- Looking for CL_VERSION_2_2 - found
-- Found OpenCL: /usr/lib64/libOpenCL.so (found version "2.2") 
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/atom_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/beck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/born_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/born_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/born_coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/born_coul_wolf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/born_coul_wolf_cs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/buck_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/buck_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/buck_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/charmm_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/coul_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/coul_long_cs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/device_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/dipole_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/dipole_lj_sf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/dipole_long_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/dpd_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/eam_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/ellipsoid_nbor_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/gauss_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj96_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_class2_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_coul_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_coul_debye_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_coul_msm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_cubic_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_dsf_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_expand_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_expand_coul_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_gromacs_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_sdk_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_sdk_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/lj_tip4p_long_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/mie_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/morse_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/neighbor_cpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/neighbor_gpu_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/pppm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/soft_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/sw_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/table_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/ufm_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/vashishta_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/yukawa_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/yukawa_colloid_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/gayberne_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/gayberne_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/re_squared_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/re_squared_lj_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/tersoff_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/tersoff_zbl_cl.h...
Creating /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu/tersoff_mod_cl.h...
-- Generating style headers...
-- Generating package headers...
-- Generating lmpinstalledpkgs.h...
-- Found Python: /usr/bin/python3.9 (found version "3.9.0") found components: Interpreter 
-- Performing Test HAVE_LLD_LINKER_FLAG
-- Performing Test HAVE_LLD_LINKER_FLAG - Success
-- Performing Test HAVE_GOLD_LINKER_FLAG
-- Performing Test HAVE_GOLD_LINKER_FLAG - Success
-- Performing Test HAVE_BFD_LINKER_FLAG
-- Performing Test HAVE_BFD_LINKER_FLAG - Success
-- Downloading and building Google Test library
-- Looking for a Fortran compiler
-- Looking for a Fortran compiler - /usr/bin/f95
-- The Fortran compiler identification is GNU 10.2.1
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/bin/f95 - skipped
-- Checking whether /usr/bin/f95 supports Fortran 90
-- Checking whether /usr/bin/f95 supports Fortran 90 - yes
-- Found MPI_C: /usr/lib64/openmpi/lib/libmpi.so (found version "3.1") 
-- Found MPI_Fortran: /usr/lib64/openmpi/lib/libmpi_usempif08.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Found Python3: /usr/bin/python3.9 (found version "3.9.0") found components: Interpreter 
-- Could NOT find YAML (missing: YAML_LIBRARY YAML_INCLUDE_DIR) 
-- Skipping tests because libyaml is not found
-- Could NOT find ClangFormat (missing: ClangFormat_EXECUTABLE) (Required is at least version "8.0")
-- The following tools and libraries have been found and configured:
 * OpenMP
 * LAPACK
 * BLAS
 * JPEG
 * PNG
 * ZLIB
 * FFTW3
 * VORO
 * PkgConfig
 * HDF5
 * OpenCL
 * Python
 * MPI
-- <<< Build configuration >>>
   Operating System: Linux
   Build type:       
   Install path:     /usr
   Generator:        Unix Makefiles using /usr/bin/gmake
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-- <<< Compilers and Flags: >>>
-- C++ Compiler:     /usr/bin/g++
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-- Fortran Compiler: /usr/bin/f95
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-- C compiler:       /usr/bin/gcc
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-- <<< Linker flags: >>>
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-- Configuring done
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/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:91:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   91 |     for (int i = 0; i < node.getChildren().size(); i++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
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  113 |             for (int i = 1; i < args.size(); i++)
      |                             ~~^~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/CompiledExpression.cpp:170:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::pair<double*, double*> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  170 |     for (int i = 0; i < variablesToCopy.size(); i++)
      |                     ~~^~~~~~~~~~~~~~~~~~~~~~~~
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  175 |     for (int step = 0; step < operation.size(); step++) {
      |                        ~~~~~^~~~~~~~~~~~~~~~~~
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  180 |             for (int i = 0; i < args.size(); i++)
      |                             ~~^~~~~~~~~~~~~
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/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvar.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvar.cpp
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   40 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:47:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   47 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp: In constructor 'Lepton::ExpressionTreeNode::ExpressionTreeNode(Lepton::Operation*, const Lepton::ExpressionTreeNode&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:53:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   53 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/ExpressionTreeNode.cpp:58:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ExpressionTreeNode>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   58 |     if (operation->getNumArguments() != children.size())
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ParsedExpression Lepton::Parser::parse(const string&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:181:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  181 |             if (pos != tokens.size())
      |                 ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:190:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  190 |         if (pos != tokens.size())
      |             ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp: In static member function 'static Lepton::ExpressionTreeNode Lepton::Parser::parsePrecedence(const std::vector<Lepton::ParseToken>&, int&, const std::map<std::__cxx11::basic_string<char>, Lepton::CustomFunction*>&, const std::map<std::__cxx11::basic_string<char>, Lepton::ExpressionTreeNode>&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:201:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  201 |     if (pos == tokens.size())
      |         ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:227:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  227 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
      |             ~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/src/Parser.cpp:241:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Lepton::ParseToken>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  241 |         if (pos == tokens.size() || tokens[pos].getType() != ParseToken::RightParen)
      |             ~~~~^~~~~~~~~~~~~~~~
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/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  4%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp
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[  4%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingEnergy.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp
[  5%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_abf.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_abf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_abf.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp
[  5%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMass.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  5%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp
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[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp
Scanning dependencies of target modify.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f CMakeFiles/modify.h.dir/build.make CMakeFiles/modify.h.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[  6%] Generating includes/lammps/modify.h
/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/modify.h /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes/lammps/modify.h
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[  6%] Built target modify.h
[  6%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.h: In constructor 'TreeNode::TreeNode(const int&, TreeNode*, TreeNode*, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.h:36:13: warning: 'TreeNode::data' will be initialized after [-Wreorder]
   36 |         int data;
      |             ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.h:32:19: warning:   'TreeNode* TreeNode::left' [-Wreorder]
   32 |         TreeNode *left;
      |                   ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp:22:1: warning:   when initialized here [-Wreorder]
   22 | TreeNode::TreeNode (const int & item, TreeNode *lptr,TreeNode *rptr,
      | ^~~~~~~~
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/revolutejoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/revolutejoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/revolutejoint.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentum.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  6%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_meta.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_meta.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_meta.cpp
[  6%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rigidbody.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rigidbody.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rigidbody.cpp
/usr/bin/gmake  -f CMakeFiles/variable.h.dir/build.make CMakeFiles/variable.h.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/variable.h.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/variable.h.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/variable.h.dir/depend.internal".
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/usr/bin/cmake -E copy_if_different /builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.h /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes/lammps/variable.h
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[  7%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rowmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rowmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rowmatrix.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/solver.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/solver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/solver.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/sphericaljoint.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/sphericaljoint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/sphericaljoint.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/system.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/system.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/system.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Coupling.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_CouplingMomentumEnergy.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect3.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect3.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect3.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect4.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect4.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect4.cpp
/usr/bin/gmake  -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/gpu.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/gpu.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/gpu.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/gpu.dir/depend.internal".
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect6.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect6.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect6.cpp
Scanning dependencies of target gpu
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f CMakeFiles/gpu.dir/build.make CMakeFiles/gpu.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[  7%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp
[  7%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualcolmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualcolmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualcolmatrix.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[  8%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualmatrix.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp: In instantiation of 'double LAMMPS_AL::Answer<numtyp, acctyp>::energy_virial(double*, double**, double*, double&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:318:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_answer.cpp:227:7: warning: unused variable 'ii' [-Wunused-variable]
  227 |   int ii, vstart=0, iend=_inum;
      |       ^~
[  8%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualrowmatrix.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualrowmatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualrowmatrix.cpp
[  8%] Building CXX object CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp.o
/usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_restraint.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_restraint.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_restraint.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[  9%] Linking CXX static library liblammps_poems_openmpi.a
/usr/bin/cmake -P CMakeFiles/poems.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/poems.dir/link.txt --verbose=1
/usr/bin/ar qc liblammps_poems_openmpi.a CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/body23joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatmap.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/colmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/eulerparameters.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fastmatrixops.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/fixedpoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/freebodyjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/inertialframe.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/joint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat3x3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat4x4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mat6x6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/matrixfun.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/mixedjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/norm.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onfunctions.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/onsolver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/particle.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemsobject.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/poemstreenode.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/point.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/prismaticjoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/revolutejoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rigidbody.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/rowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/solver.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/sphericaljoint.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/system.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect3.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect4.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/vect6.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualcolmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/virtualrowmatrix.cpp.o CMakeFiles/poems.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems/workspace.cpp.o
/usr/bin/ranlib liblammps_poems_openmpi.a
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[  9%] Built target poems
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp
/usr/bin/gmake  -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/ocl_get_devices.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/ocl_get_devices.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles/ocl_get_devices.dir/depend.internal".
Scanning dependencies of target ocl_get_devices
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f CMakeFiles/ocl_get_devices.dir/build.make CMakeFiles/ocl_get_devices.dir/build
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[  9%] Building CXX object CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp.o
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
/usr/bin/g++ -DUCL_OPENCL  -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp:25:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[  9%] Linking CXX executable ocl_get_devices
/usr/bin/cmake -E cmake_link_script CMakeFiles/ocl_get_devices.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags CMakeFiles/ocl_get_devices.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_get_devices.cpp.o -o ocl_get_devices  /usr/lib64/libOpenCL.so 
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/CMakeFiles/googletest.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/CMakeFiles/googletest.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/CMakeFiles/googletest.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/CMakeFiles/googletest.dir/depend.internal".
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[  9%] Creating directories for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-build
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/tmp
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-mkdir
[  9%] Performing download step (verify and extract) for 'googletest'
/usr/bin/cmake -P /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-download-.cmake
-- googletest download command succeeded.  See also /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-download-*.log
/usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-download
[  9%] No update step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-update
[  9%] No patch step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-patch
[  9%] Performing configure step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-build && /usr/bin/cmake -P /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-configure-.cmake
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp
-- googletest configure command succeeded.  See also /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-configure-*.log
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-configure
[  9%] Performing build step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-build && /usr/bin/cmake -Dmake=/usr/bin/gmake -P /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-build-.cmake
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp: In instantiation of 'void LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, int, double**, int*, int*, int*, int**, bool, bool, bool, bool, int&, double, bool&) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:398:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:271:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  271 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp: In instantiation of 'int** LAMMPS_AL::BaseThree<numtyp, acctyp>::compute(int, int, int, double**, int*, double*, double*, tagint*, int**, tagint**, bool, bool, bool, bool, int&, int**, int**, double, bool&) [with numtyp = float; acctyp = double; tagint = int]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:398:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.cpp:340:27: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  340 |   if (nall*(2+_max_nbors) > dev_short_nbor.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
[  9%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferKernel.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[  9%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp
[  9%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_beck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TransferPartitionOfUnity.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomToMoleculeTransfer.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp
-- googletest build command succeeded.  See also /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-build-*.log
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-build
[ 10%] No install step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-build && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-install
[ 10%] No test step for 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-build && /usr/bin/cmake -E echo_append
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-build && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-test
[ 10%] Completed 'googletest'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E make_directory /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/CMakeFiles
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/CMakeFiles/googletest-complete
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest && /usr/bin/cmake -E touch /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/googletest-prefix/src/googletest-stamp/googletest-done
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 10%] Built target googletest
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/BodyForce.cpp
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 10%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp
[ 10%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_volmaps.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_volmaps.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_volmaps.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 10%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CBLattice.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvardeps.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvardeps.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvardeps.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_coul_wolf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/usr/bin/gmake  -f unittest/utils/CMakeFiles/test_math_eigen_impl.dir/build.make unittest/utils/CMakeFiles/test_math_eigen_impl.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/utils /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/CMakeFiles/test_math_eigen_impl.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/CMakeFiles/test_math_eigen_impl.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/CMakeFiles/test_math_eigen_impl.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/CMakeFiles/test_math_eigen_impl.dir/depend.internal".
Scanning dependencies of target test_math_eigen_impl
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f unittest/utils/CMakeFiles/test_math_eigen_impl.dir/build.make unittest/utils/CMakeFiles/test_math_eigen_impl.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 11%] Building CXX object unittest/utils/CMakeFiles/test_math_eigen_impl.dir/test_math_eigen_impl.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils && /usr/bin/g++  -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -std=c++11 -o CMakeFiles/test_math_eigen_impl.dir/test_math_eigen_impl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/utils/test_math_eigen_impl.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_born_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp
[ 11%] Linking CXX executable test_math_eigen_impl
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_math_eigen_impl.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags CMakeFiles/test_math_eigen_impl.dir/test_math_eigen_impl.cpp.o -o test_math_eigen_impl 
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CauchyBorn.cpp
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 11%] Built target test_math_eigen_impl
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CbPotential.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CbPotential.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/CbPotential.cpp
[ 11%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 11%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp
[ 11%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ConcentrationRegulator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ChargeRegulator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/flammps.dir/build.make unittest/fortran/CMakeFiles/flammps.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/flammps.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/flammps.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/flammps.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/flammps.dir/depend.internal".
Scanning dependencies of target flammps
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/flammps.dir/build.make unittest/fortran/CMakeFiles/flammps.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 12%] Building Fortran object unittest/fortran/CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran && /usr/bin/f95   -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIC -c /builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90 -o CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90: Warning: -D_FORTIFY_SOURCE not defined
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90: Warning: -D_GLIBCXX_ASSERTIONS not defined
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/liblammps.mod unittest/fortran/CMakeFiles/flammps.dir/liblammps.mod.stamp GNU
[ 12%] Linking Fortran static library libflammps.a
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran && /usr/bin/cmake -P CMakeFiles/flammps.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/flammps.dir/link.txt --verbose=1
/usr/bin/ar qc libflammps.a CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o
/usr/bin/ranlib libflammps.a
/usr/bin/cmake -E touch unittest/fortran/CMakeFiles/flammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/fortran/lammps.f90.o.provides.build
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 12%] Built target flammps
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_buck_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_charmm_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronChargeDensity.cpp
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronDragPower.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElasticTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronFlux.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronFlux.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronFlux.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_replicas.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_replicas.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_replicas.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatCapacity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatCapacity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatCapacity.cpp
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_tcl.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_tcl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_tcl.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_volmaps.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_volmaps.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_volmaps.cpp
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatFlux.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatFlux.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronHeatFlux.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[ 12%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 12%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ElectronPhononExchange.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp: In member function 'LAMMPS_AL::CoulDSF<float, double>::init(int, int, int, int, int, double, double, _IO_FILE*, double, double*, double, double, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.cpp:83:18: warning: 'MEM[(float * *)&host_write + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   83 |     host_write[i]=host_special_coul[i];
      |     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 12%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp
[ 13%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 13%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp
[ 13%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp: In member function 'LAMMPS_AL::CoulLongCS<float, double>::init(int, double**, int, int, int, int, double, double, _IO_FILE*, double, double*, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.cpp:65:18: warning: 'MEM[(float * *)&host_write + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
   65 |     host_write[i]=host_special_coul[i];
      |     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 13%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 14%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_cs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvartypes.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvartypes.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvartypes.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelDriftDiffusion.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.cpp:16:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp.o
/usr/bin/g++ -DCOLVARS_LAMMPS -DLEPTON -DLEPTON_USE_STATIC_LIBRARIES -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -std=c++11 -o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelElectrostatic.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 14%] Linking CXX static library liblammps_colvars_openmpi.a
/usr/bin/cmake -P CMakeFiles/colvars.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/colvars.dir/link.txt --verbose=1
/usr/bin/ar qc liblammps_colvars_openmpi.a CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvaratoms.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_abf.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_alb.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_histogram.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_meta.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarbias_restraint.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_angles.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_apath.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_coordnums.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_distances.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_gpath.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_protein.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_rotations.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarcomp_volmaps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvardeps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvargrid.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarmodule.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparams.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarparse.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_replicas.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_tcl.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarproxy_volmaps.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_bias.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarscript_commands_colvar.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvartypes.cpp.o CMakeFiles/colvars.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/colvarvalue.cpp.o
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
/usr/bin/ranlib liblammps_colvars_openmpi.a
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 14%] Built target colvars
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_lj_sf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dipole.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dipole_long_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Element.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ExtrinsicModelTwoTemperature.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Interpolate.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_dpd.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_dpd_tstat_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp
[ 14%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp: In instantiation of 'void LAMMPS_AL::EAM<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:533:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.cpp:448:14: warning: variable 'vflag' set but not used [-Wunused-but-set-variable]
  448 |   int eflag, vflag;
      |              ^~~~~
In file included from /usr/include/c++/10/cassert:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp:9:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp: In member function 'virtual void ATC::FE_3DMesh::partition_mesh()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Mesh.cpp:2124:32: warning: comparison of integer expressions of different signedness: 'std::vector<std::vector<int> >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
 2124 |     assert(procEltLists.size() >= nProcs);
      |            ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_alloy_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 14%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FE_Engine.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_eam_fs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 15%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp
[ 15%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gauss_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Function.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldEulerIntegrator.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_gayberne_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FundamentalAtomicQuantity.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/FieldManager.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj96_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/GhostManager.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_class2_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/InterscaleOperators.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ImplicitSolveOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KernelFunction.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Array.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Array2D.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KD_Tree.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_debye_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 16%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_coul_msm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/KinetoThermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_cubic_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Kinetostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_dsf_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MPI_Wrappers.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_coul_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_expand_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Material.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_gromacs_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp
[ 17%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MeshReader.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_sdk_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:40,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h: In instantiation of 'int ucl_opencl::UCL_D_Vec<numtyp>::resize_ib(int) [with numtyp = int]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:245:20:   required from 'void LAMMPS_AL::LJ_TIP4PLong<numtyp, acctyp>::copy_relations_data(int, tagint*, int*, int, int*, int, int) [with numtyp = float; acctyp = double; tagint = int]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:384:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h:378:15: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  378 |     { if (cols>_cols) return resize(cols); else return UCL_SUCCESS; }
      |           ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h: In instantiation of 'int ucl_opencl::UCL_D_Vec<numtyp>::resize_ib(int) [with numtyp = _lgpu_float4]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:247:14:   required from 'void LAMMPS_AL::LJ_TIP4PLong<numtyp, acctyp>::copy_relations_data(int, tagint*, int*, int, int*, int, int) [with numtyp = float; acctyp = double; tagint = int]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:384:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h:378:15: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h: In instantiation of 'int ucl_opencl::UCL_D_Vec<numtyp>::resize_ib(int) [with numtyp = _lgpu_double4]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:206:31:   required from 'void LAMMPS_AL::LJ_TIP4PLong<numtyp, acctyp>::loop(bool, bool) [with numtyp = float; acctyp = double]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.cpp:384:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ucl_d_vec.h:378:15: warning: comparison of integer expressions of different signedness: 'const int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
[ 17%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp
[ 18%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_charge.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_lj_tip4p_long_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MoleculeSet.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_mie_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/OutputManager.cpp
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/NonLinearSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_morse_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParDiagonalMatrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PaqAtcUtility.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_kernel.h:27,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_texture.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_neighbor_shared.cpp:17:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.cpp:25:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm.h:20,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_pppm_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.cpp:27:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ParSparseMatrix.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp
[ 19%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_ellipsoid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_re_squared_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_soft_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp: In member function 'LAMMPS_AL::SW<float, double>::init(int, int, int, int, double, double, _IO_FILE*, int*, int, int***, int, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_map + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:144:18: note: 'MEM[(int * *)&dview_map + 24B]' was declared here
  144 |   UCL_H_Vec<int> dview_map(lj_types, *(this->ucl_device), UCL_WRITE_ONLY);
      |                  ^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_elem2param + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_sw.cpp:129:18: note: 'MEM[(int * *)&dview_elem2param + 24B]' was declared here
  129 |   UCL_H_Vec<int> dview_elem2param(nelements*nelements*nelements,
      |                  ^~~~~~~~~~~~~~~~
[ 19%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_table_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp: In instantiation of 'void LAMMPS_AL::Tersoff<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:330:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.cpp:260:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  260 |   if (nall*this->_max_nbors > _zetaij.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp: In instantiation of 'void LAMMPS_AL::TersoffMod<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:330:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.cpp:260:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  260 |   if (nall*this->_max_nbors > _zetaij.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_mod_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp: In instantiation of 'void LAMMPS_AL::TersoffZBL<numtyp, acctyp>::loop(bool, bool, int) [with numtyp = float; acctyp = double]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:356:16:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.cpp:285:29: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  285 |   if (nall*this->_max_nbors > _zetaij.cols()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_tersoff_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.cpp:26:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm.h:21,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_ufm_ext.cpp:22:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp: In member function 'LAMMPS_AL::Vashishta<float, double>::init(int, int, int, int, double, double, _IO_FILE*, int*, int, int***, int, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*, double const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_map + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:175:18: note: 'MEM[(int * *)&dview_map + 24B]' was declared here
  175 |   UCL_H_Vec<int> dview_map(lj_types, *(this->ucl_device), UCL_WRITE_ONLY);
      |                  ^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_three.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:639:38: warning: 'MEM[(int * *)&dview_elem2param + 24B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  639 |     CL_SAFE_CALL(clEnqueueWriteBuffer(cq,dst.cbegin(),block,dst_offset,n,
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp:160:18: note: 'MEM[(int * *)&dview_elem2param + 24B]' was declared here
  160 |   UCL_H_Vec<int> dview_elem2param(nelements*nelements*nelements,
      |                  ^~~~~~~~~~~~~~~~
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerPairQuantity.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PolynomialSolver.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PrescribedDataManager.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PoissonSolver.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.h:8,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PhysicsModel.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/g++ -DGENERIC_OCL -DLAMMPS_SMALLBIG -DMPI_GERYON -DUCL_NO_EXIT -DUSE_OPENCL -D_SINGLE_DOUBLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gpu -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp:24:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Quadrature.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_timer.h:28,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h: In member function 'int ucl_opencl::UCL_Device::create_context()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_device.h:384:25: warning: variable 'props' set but not used [-Wunused-but-set-variable]
  384 |   cl_context_properties props[3];
      |                         ^~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_mat.h:29,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_atom.h:24,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_device.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_base_atomic.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.h:19,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h: In function 'int ucl_opencl::_host_alloc(mat_type&, copy_type&, size_t, UCL_MEMOPT, UCL_MEMOPT)':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:107:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  107 |   if (error_flag != CL_SUCCESS)
      |   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/geryon/ocl_memory.h:109:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  109 |     *mat.host_ptr() = (typename mat_type::data_type*)
      |     ^
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp
[ 20%] Linking CXX static library liblammps_gpu_openmpi.a
/usr/bin/cmake -P CMakeFiles/gpu.dir/cmake_clean_target.cmake
/usr/bin/cmake -E cmake_link_script CMakeFiles/gpu.dir/link.txt --verbose=1
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CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_vashishta_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_colloid_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_yukawa_ext.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl.cpp.o CMakeFiles/gpu.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/gpu/lal_zbl_ext.cpp.o
/usr/bin/ranlib liblammps_gpu_openmpi.a
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.h:9,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SpeciesTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 20%] Built target gpu
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Stress.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp
[ 20%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LinearSolver.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SchrodingerSolver.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ThermalTimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeFilter.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TimeIntegrator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixDef.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:3,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseVector.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Vector.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Utility.h:303:22: warning: 'std::string ATC_Utility::to_cap(const string&)' defined but not used [-Wunused-function]
  303 |   static std::string to_cap(const std::string &s) {
      |                      ^~~~~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ViscousStress.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/AtomicRegulator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Thermostat.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationChargeDiffusion.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronContinuity.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix.h:297,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:10,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/LammpsInterface.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantity.h:7,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/PerAtomQuantityLibrary.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferOperator.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.h:11,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/TransferLibrary.cpp:2:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h: In member function 'ATC_matrix::SparseMatrix<double>::compress()':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/SparseMatrix-inl.h:341:12: warning: 'next.v' may be used uninitialized in this function [-Wmaybe-uninitialized]
  341 |     val[i] = next.v;
      |     ~~~~~~~^~~~~~~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronMomentum.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationDiffusion.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationElectronTemperature.cpp
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMomentum.cpp
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationMassDiffusion.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPoisson.cpp
[ 21%] Building CXX object CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp.o
/usr/bin/g++ -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -isystem /usr/include/openmpi-riscv64 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -std=c++11 -o CMakeFiles/atc.dir/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationSchrodinger.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Transfer.h:6,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/WeakEquationPhononTemperature.cpp:1:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
[ 21%] Linking CXX static library liblammps_atc_openmpi.a
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/atom.cpp: In member function 'LAMMPS_NS::Atom::data_atoms(int, char*, int, int, int, int, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/atom.cpp:1124:42: warning: 'iptr' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1124 |       imx = utils::inumeric(FLERR,values[iptr],false,lmp);
      |                                          ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_brick.cpp: In member function 'LAMMPS_NS::CommBrick::borders()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_brick.cpp:703:28: warning: 'nfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  703 |   int nsend,nrecv,sendflag,nfirst,nlast,ngroup;
      |                            ^~~~~~
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_aggregate_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_aggregate_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_aggregate_atom.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_tiled.cpp: In member function 'LAMMPS_NS::CommTiled::borders()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/comm_tiled.cpp:948:25: warning: 'nlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  948 |           for (i = 0; i < nlast; i++) {
      |                       ~~^~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_adf.cpp: In member function 'LAMMPS_NS::ComputeADF::init()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_adf.cpp:328:22: warning: 'x0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  328 |     array[i][0] = x0 + (i+0.5) * deltax;
      |                   ~~~^~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp: In member function 'LAMMPS_NS::ComputeAngleLocal::compute_angles(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp:301:25: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
  301 |           ptr[n] = 180.0*theta/MY_PI;
      |                    ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp:309:15: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  309 |           ivar++;
      |           ~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_angle_local.cpp:245:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |         if (tag[atom2] != onemols[imol]->angle_atom2[atom2][i]) continue;
      |                                   ^~~~
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[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp: In member function 'LAMMPS_NS::ComputeBondLocal::compute_bonds(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:413:20: warning: 'engrot' may be used uninitialized in this function [-Wmaybe-uninitialized]
  413 |             ptr[n] = engrot;
      |             ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:410:20: warning: 'engvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
  410 |             ptr[n] = engvib;
      |             ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:416:20: warning: 'engtrans' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             ptr[n] = engtrans;
      |             ~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:395:20: warning: 'engpot' may be used uninitialized in this function [-Wmaybe-uninitialized]
  395 |             ptr[n] = engpot;
      |             ~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:235:18: warning: 'omegasq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  235 |   double inertia,omegasq;
      |                  ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:422:20: warning: 'vvib' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ptr[n] = vvib;
      |             ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:426:17: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |             ivar++;
      |             ~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:285:42: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  285 |         btype = onemols[imol]->bond_type[iatom][i];
      |                                          ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_bond_local.cpp:285:25: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  285 |         btype = onemols[imol]->bond_type[iatom][i];
      |                         ^~~~
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_spread_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_spread_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_spread_atom.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cluster_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cluster_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cluster_atom.cpp
[ 23%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cna_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cna_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_cna_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::atom2bin1d()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1521:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1521 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1522:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1522 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
      |                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1521:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1521 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::atom2bin2d()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1595:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1595 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1596:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1596 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
      |                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1595:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1595 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::atom2bin3d()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1700:51: warning: 'prd' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1700 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1701:31: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1701 |       if (xremap >= boxhi[idim]) xremap -= prd[idim];
      |                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:1700:30: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1700 |       if (xremap < boxlo[idim]) xremap += prd[idim];
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp: In member function 'LAMMPS_NS::ComputeChunkAtom::ComputeChunkAtom(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_chunk_atom.cpp:419:52: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  419 |         if (minflag[idim] == COORD) minvalue[idim] *= scale;
      |                                     ~~~~~~~~~~~~~~~^~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_erotate_sphere.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_erotate_sphere.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_dihedral_local.cpp: In member function 'LAMMPS_NS::ComputeDihedralLocal::compute_dihedrals(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_dihedral_local.cpp:319:15: warning: 'ivar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  319 |           ivar++;
      |           ~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_dihedral_local.cpp:242:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  242 |         if (tag[atom2] != onemols[imol]->dihedral_atom2[atom2][i]) continue;
      |                                   ^~~~
[ 24%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_erotate_sphere_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_global_atom.cpp: In member function 'LAMMPS_NS::ComputeGlobalAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_global_atom.cpp:504:24: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |             if (j >= 0 && j < vmax) vector_atom[i] = source[j];
      |                 ~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_global_atom.cpp:443:24: warning: 'vmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  443 |             if (j >= 0 && j < vmax) array_atom[i][m] = source[j];
      |                 ~~~~~~~^~~~~~~~~~~
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[ 25%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_ke_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_improper_local.cpp: In member function 'LAMMPS_NS::ComputeImproperLocal::compute_impropers(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_improper_local.cpp:161:35: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |         if (tag[atom2] != onemols[imol]->improper_atom2[atom2][i]) continue;
      |                                   ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_improper_local.cpp:217:17: warning: 'cbuf' may be used uninitialized in this function [-Wmaybe-uninitialized]
  217 |           cbuf[n] = 180.0*acos(c)/MY_PI;
      |                 ^
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp: In member function 'LAMMPS_NS::ComputePressure::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp:253:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  253 |       scalar = (temperature->dof * boltz * t +
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  254 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
      |                 ~~~~~~~~~                     
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp: In member function 'LAMMPS_NS::ComputePressure::compute_vector()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/compute_pressure.cpp:308:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  308 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
      |                    ~~~~~~~~~~~^
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp: In member function 'LAMMPS_NS::CreateAtoms::add_random()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:718:55: warning: 'boxhi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  718 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
      |                                                ~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:718:31: warning: 'boxlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
  718 |             coord[1] < boxlo[1] || coord[1] >= boxhi[1] ||
      |                        ~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp: In member function 'LAMMPS_NS::CreateAtoms::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:271:66: warning: 'subsetseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
  271 |   if (subsetflag != NONE) ranlatt = new RanMars(lmp,subsetseed+me);
      |                                                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/create_atoms.cpp:267:40: warning: 'molseed' may be used uninitialized in this function [-Wmaybe-uninitialized]
  267 |     ranmol = new RanMars(lmp,molseed+me);
      |                                        ^
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/delete_bonds.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp: In member function 'LAMMPS_NS::Domain::box_too_small_check()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:883:38: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  883 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:883:21: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  883 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                     ^~~~
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp: In member function 'LAMMPS_NS::Domain::image_check()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:784:38: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  784 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/domain.cpp:784:21: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  784 |         if (onemols[imol]->bond_type[iatom][j] < 0) continue;
      |                     ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp: In member function 'LAMMPS_NS::Dump::write()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp:518:13: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  518 |     atom->v = vhold;
      |     ~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp:517:13: warning: 'xhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  517 |     atom->x = xhold;
      |     ~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.cpp:519:17: warning: 'imagehold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  519 |     atom->image = imagehold;
      |     ~~~~~~~~~~~~^~~~~~~~~~~
[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_dcd.cpp.o
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[ 27%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_deprecated.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_movie.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_movie.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp: In member function 'LAMMPS_NS::DumpCustom::count()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp:1132:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1132 |                 (*ptr != 0.0 && value != 0.0))
      |                 ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp:629:13: warning: 'values' may be used uninitialized in this function [-Wmaybe-uninitialized]
  629 |     double *values;
      |             ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.cpp:1141:42: warning: 'ptrhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1141 |         for (i = 0; i < nlocal; i++, ptr += nstride) values[i] = *ptr;
      |                                      ~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp: In member function 'LAMMPS_NS::DumpImage::create_image()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:1010:33: warning: 'color2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1010 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:1004:33: warning: 'color1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1004 |             image->draw_cylinder(x[atom1],xmid,color1,diameter,3);
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:945:54: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  945 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:945:37: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  945 |           btype = atom->map(onemols[imol]->bond_type[iatom][m]);
      |                                     ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:845:29: warning: 'color' may be used uninitialized in this function [-Wmaybe-uninitialized]
  845 |         image->draw_cylinder(pt3,pt1,color,tdiamvalue,3);
      |         ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_image.cpp:1010:33: warning: 'diameter' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1010 |             image->draw_cylinder(xmid,x[atom2],color2,diameter,3);
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_xyz.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/finish.cpp: In member function 'LAMMPS_NS::Finish::end(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/finish.cpp:552:9: warning: 'nneighfull' may be used uninitialized in this function [-Wmaybe-uninitialized]
  552 |     tmp = MAX(nneigh,nneighfull);
/builddir/build/BUILD/lammps-patch_29Oct2020/src/finish.cpp:552:9: warning: 'nneigh' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp: In member function 'LAMMPS_NS::FixAdapt::change_settings()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp:628:33: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  628 |             if (scaleflag) q[i] *= scale;
      |                            ~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp:607:38: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  607 |             if (scaleflag) radius[i] *= scale;
      |                            ~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp: In member function 'LAMMPS_NS::FixAdapt::restore_settings()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_adapt.cpp:709:43: warning: 'scale' may be used uninitialized in this function [-Wmaybe-uninitialized]
  709 |               else rmass[i] *= scale*scale*scale;
      |                                ~~~~~~~~~~~^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_histo_weight.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_histo_weight.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_correlate.cpp: In member function 'LAMMPS_NS::FixAveCorrelate::end_of_step()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_correlate.cpp:480:26: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  480 |     values[lastindex][i] = scalar;
      |     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_aveforce.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_aveforce.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_balance.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_balance.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_balance.cpp
[ 28%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_box_relax.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_box_relax.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_box_relax.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp: In member function 'LAMMPS_NS::FixAveTime::column_length(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp:970:14: warning: 'lengthone' may be used uninitialized in this function [-Wmaybe-uninitialized]
  970 |         else if (lengthone != length)
      |              ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp: In member function 'LAMMPS_NS::FixAveTime::invoke_scalar(long)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp:629:20: warning: 'scalar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  629 |     else vector[i] += scalar;
      |          ~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp: In member function 'LAMMPS_NS::FixAveTime::FixAveTime(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_ave_time.cpp:414:30: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
  414 |         if (i == 0) extarray = value;
      |                     ~~~~~~~~~^~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_balance.cpp: In member function 'LAMMPS_NS::FixBalance::rebalance()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_balance.cpp:298:53: warning: 'sendproc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  298 |   if (lbstyle == BISECTION) irregular->migrate_atoms(0,1,sendproc);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp: In member function 'LAMMPS_NS::FixMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp:842:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  842 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp:812:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  812 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_move.cpp:782:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
      |                                             ~~~~~~~~~~~~~~~~^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_restrain.cpp: In member function 'LAMMPS_NS::FixRestrain::restrain_dihedral(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_restrain.cpp:646:33: warning: 'ddf1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  646 |   df1 = df1*cos_target[m] - ddf1*sin_target[m];
      |                             ~~~~^~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_viscous.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_viscous.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_vector.cpp: In member function 'LAMMPS_NS::FixVector::FixVector(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_vector.cpp:149:14: warning: 'finalvalue' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |     extarray = finalvalue;
      |     ~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_vector.cpp:138:10: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |     else if (value != finalvalue)
      |          ^~
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_harmonic.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_harmonic.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj1043.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj1043.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj1043.cpp
[ 32%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj126.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj126.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_lj126.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp: In member function 'LAMMPS_NS::FixWall::FixWall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall.cpp:63:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   63 |       int newwall;
      |           ^~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_reflect.cpp: In member function 'LAMMPS_NS::FixWallReflect::FixWallReflect(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fix_wall_reflect.cpp:57:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   57 |       int newwall;
      |           ^~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/image.cpp: In member function 'LAMMPS_NS::Image::draw_cube(double*, double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/image.cpp:517:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  517 |           bool xin = ((surface[0]+tdir[0]) >= -radius) &&
      |                       ~~~~~~~~~~~^~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp: In function 'MathExtra::no_squish_rotate(int, double*, double*, double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:7: warning: 'kq[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:33: warning: 'kq[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |         ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:20: warning: 'kq[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |         ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:176:13: warning: 'kq[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |   phi = p[0]*kq[0] + p[1]*kq[1] + p[2]*kq[2] + p[3]*kq[3];
      |         ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:187:28: warning: 'kp[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |   p[3] = c_phi*p[3] + s_phi*kp[3];
      |                       ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:186:28: warning: 'kp[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |   p[2] = c_phi*p[2] + s_phi*kp[2];
      |                       ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:185:28: warning: 'kp[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |   p[1] = c_phi*p[1] + s_phi*kp[1];
      |                       ~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.cpp:184:28: warning: 'kp[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |   p[0] = c_phi*p[0] + s_phi*kp[0];
      |                       ~~~~~^~~~~~
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_special.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire_old.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire_old.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire.cpp: In member function 'LAMMPS_NS::MinFire::iterate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire.cpp:439:46: warning: 'scale2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  439 |             v[i][0] = scale1*v[i][0] + scale2*f[i][0];
      |                                        ~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_fire.cpp:344:38: warning: 'scale1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  344 |             v[i][2] = scale1*v[i][2] + scale2*f[i][2];
      |                       ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_linesearch.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/min_linesearch.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_quickmin.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_quickmin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/min_quickmin.cpp
[ 34%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_sd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/min_sd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/min_sd.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp: In member function 'LAMMPS_NS::LAMMPS::LAMMPS(int, char**, ompi_communicator_t*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp:183:14: warning: 'wlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |   int wfirst,wlast;
      |              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp:183:7: warning: 'wfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |   int wfirst,wlast;
      |       ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_atomonly.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_atomonly.cpp
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp: In member function 'LAMMPS_NS::Neighbor::choose_stencil(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp:1681:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1681 |     if (newtflag) {
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp: In member function 'LAMMPS_NS::Neighbor::choose_pair(LAMMPS_NS::NeighRequest*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/neighbor.cpp:1793:5: warning: 'newtflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1793 |     if (newtflag) {
      |     ^~
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp: In member function 'LAMMPS_NS::NPairFullBin::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp:101:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  102 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  103 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp:101:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin.cpp:101:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 35%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp: In member function 'LAMMPS_NS::NPairFullBinGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp:107:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  108 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  109 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp:107:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_bin_ghost.cpp:107:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_atomonly_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_atomonly_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_atomonly_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp: In member function 'LAMMPS_NS::NPairFullMulti::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp:108:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  109 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  110 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp:108:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_multi.cpp:108:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp: In member function 'LAMMPS_NS::NPairFullNsq::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:102:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  102 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  103 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  104 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:102:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  102 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:102:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  102 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq.cpp:88:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   88 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp: In member function 'LAMMPS_NS::NPairFullNsqGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp:101:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  102 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  103 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp:101:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_full_nsq_ghost.cpp:101:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp:105:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  105 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  106 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  107 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp:105:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  105 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff.cpp:105:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  105 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp:113:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  115 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp:113:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newtoff_ghost.cpp:113:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp:137:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  138 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  139 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp:137:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton.cpp:137:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp:111:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp:111:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_bin_newton_tri.cpp:111:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfMultiNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp:112:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newtoff.cpp:112:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp: In member function 'LAMMPS_NS::NPairHalfMultiNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp:145:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  146 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  147 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp:145:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton.cpp:145:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp: In member function 'LAMMPS_NS::NPairHalfMultiNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  122 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp:120:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_multi_newton_tri.cpp:120:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:103:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  103 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  104 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  105 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:103:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  103 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:103:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  103 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff.cpp:89:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   89 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp.o
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[ 36%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp: In member function 'LAMMPS_NS::NPairHalfNsqNewtoffGhost::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:112:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:112:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:112:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newtoff_ghost.cpp:98:39: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   98 |         if (includegroup && !(mask[j] & bitmask)) continue;
      |                              ~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp: In member function 'LAMMPS_NS::NPairHalfNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:120:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  122 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:120:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:120:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_nsq_newton.cpp:90:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   90 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfRespaBinNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:148:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:129:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  130 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  131 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:129:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:129:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:148:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:70:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:70:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:70:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newtoff.cpp:71:16: note: 'ipage_middle' was declared here
   71 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp: In member function 'LAMMPS_NS::NPairHalfRespaBinNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:194:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:175:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  177 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:175:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:175:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:149:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:69:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   69 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:69:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   69 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:69:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   69 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton.cpp:70:16: note: 'ipage_middle' was declared here
   70 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
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[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newtoff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newtoff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_bin_newtoff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp: In member function 'LAMMPS_NS::NPairHalfRespaBinNewtonTri::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:156:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:137:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  138 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  139 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:137:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:137:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:156:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:70:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:70:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:70:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   70 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_bin_newton_tri.cpp:71:16: note: 'ipage_middle' was declared here
   71 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfRespaNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:144:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:127:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  127 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  128 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  129 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:127:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  127 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:127:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  127 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:144:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:74:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   74 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:75:16: note: 'ipage_middle' was declared here
   75 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newtoff.cpp:113:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp: In member function 'LAMMPS_NS::NPairHalfRespaNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:164:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  164 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:146:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  147 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  148 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:146:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:146:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:164:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  164 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:58:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   58 |     page = pages[ipage];
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:77:16: note: 'ipage_middle' was declared here
   77 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:76:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   76 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_respa_nsq_newton.cpp:116:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp: In member function 'LAMMPS_NS::NPairHalfSizeNsqNewtoff::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newtoff.cpp:77:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   77 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_halffull_newton.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_halffull_newton.cpp
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newton.cpp: In member function 'LAMMPS_NS::NPairHalfSizeNsqNewton::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_half_size_nsq_newton.cpp:80:37: warning: 'bitmask' may be used uninitialized in this function [-Wmaybe-uninitialized]
   80 |       if (includegroup && !(mask[j] & bitmask)) continue;
      |                            ~~~~~~~~~^~~~~~~~~~
[ 37%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size_off2on_oneside.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_size_off2on_oneside.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp: In member function 'LAMMPS_NS::NPairSkipRespa::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp:150:26: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  150 |       numneigh_middle[i] = n_middle;
      |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp:18:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:74:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   74 |     ndatum += n;
      |     ~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/npair_skip_respa.cpp:61:16: note: 'ipage_middle' was declared here
   61 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born.cpp
[ 39%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp: In member function 'LAMMPS_NS::Pair::init_tables(double, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:398:30: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |         ftable[i] = qqrd2e/r * fgamma;
      |                     ~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:399:30: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |         etable[i] = qqrd2e/r * egamma;
      |                     ~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:401:39: warning: 'derfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  401 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
      |                                ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:401:39: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:401:49: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  401 |         ftable[i] = qqrd2e/r * (derfc + MY_ISPI4*grij*expm2);
      |                                         ~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp: In member function 'LAMMPS_NS::Pair::write_file(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair.cpp:1763:24: warning: 'q_hold' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1763 |   if (atom->q) atom->q = q_hold;
      |                ~~~~~~~~^~~~~~~~
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[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck.cpp.o
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[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp: In member function 'LAMMPS_NS::PairBornCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:487:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  487 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:488:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  487 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  488 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:482:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  482 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                            ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:483:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  483 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:482:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  482 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                            ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp: In member function 'LAMMPS_NS::PairBornCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:166:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:162:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:163:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  163 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:167:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_dsf.cpp:162:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp: In member function 'LAMMPS_NS::PairBornCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:485:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  485 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:486:7: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  485 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  486 |       + d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:480:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  480 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:481:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:480:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  480 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp: In member function 'LAMMPS_NS::PairBornCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:169:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:166:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_born_coul_wolf.cpp:170:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  170 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_debye.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_debye.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_debye.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp: In member function 'LAMMPS_NS::PairBuckCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:468:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:468:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  468 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                      ~~~~~~~~~~~~~~~^~~~~~
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_dsf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp: In member function 'LAMMPS_NS::PairBuckCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:147:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_buck_coul_cut.cpp:147:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_dpd.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp: In member function 'LAMMPS_NS::PairCoulWolf::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp:317:33: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp:317:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |     phicoul = prefactor * (erfcc-e_shift*r);
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_coul_wolf.cpp:317:33: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |     phicoul = prefactor * (erfcc-e_shift*r);
      |                           ~~~~~~^~~~~~~~~~~
[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_dpd_tstat.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp: In member function 'LAMMPS_NS::PairHybridOverlay::copy_svector(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp:148:36: warning: 'this_style' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |         svector[n++] = this_style->svector[l];
      |                        ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp: In member function 'LAMMPS_NS::PairHybridOverlay::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid_overlay.cpp:73:8: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
   73 |   arg[2+multflag] = arg[1];
      |       ~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid.cpp: In member function 'LAMMPS_NS::PairHybrid::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_hybrid.cpp:476:8: warning: 'multflag' may be used uninitialized in this function [-Wmaybe-uninitialized]
  476 |   arg[2+multflag] = arg[1];
      |       ~^~~~~~~~~
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[ 40%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp: In member function 'LAMMPS_NS::PairLJCubic::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:354:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  354 |     philj = epsilon[itype][jtype]*(PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                                    ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:352:46: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  352 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp: In member function 'LAMMPS_NS::PairLJ96Cut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp:392:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |             fpair = factor_lj*forcelj*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj96_cut.cpp:395:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  395 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  396 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp: In member function 'LAMMPS_NS::PairLJCubic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:132:49: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |             evdwl = epsilon[itype][jtype]*(PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                                            ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cubic.cpp:130:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
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[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp: In member function 'LAMMPS_NS::PairLJCut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp:386:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  386 |             fpair = factor_lj*forcelj*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut.cpp:389:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  390 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp:453:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  453 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  454 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_cut.cpp:140:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  140 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  141 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebye::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:216:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  216 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  217 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:212:13: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:212:53: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |     phicoul = force->qqrd2e * atom->q[i]*atom->q[j] * rinv * screening;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_expand.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_expand.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_expand.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:466:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  466 |     eng += phicoul;
      |     ~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  465 |     phicoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                            ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:465:34: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:459:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  459 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  460 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebye::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:110:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  110 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:110:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  110 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_debye.cpp:113:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  113 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:169:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:162:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_dsf.cpp:168:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp: In member function 'LAMMPS_NS::PairLJCutCoulWolf::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp:168:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_cut_coul_wolf.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  162 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp:436:44: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |     phiswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                       ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth_linear.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth_linear.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth_linear.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs.cpp:138:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacs::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:503:30: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  503 |         (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
      |         ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:500:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  500 |     philj += ljsw5[itype][jtype];
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:492:29: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  492 |         tc*tc*tc * (coulsw3 + coulsw4*tc);
      |                    ~~~~~~~~~^~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacs::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:159:49: warning: 'tc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |               ecoulswitch = tc*tc*tc * (coulsw3 + coulsw4*tc);
      |                                        ~~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:169:38: warning: 'tlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |                 (ljsw3[itype][jtype] + ljsw4[itype][jtype]*tlj);
      |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:166:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             evdwl += ljsw5[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_gromacs_coul_gromacs.cpp:165:41: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  165 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                                         ^~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_morse.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_morse.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_morse.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp: In member function 'LAMMPS_NS::PairLJSmooth::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:454:30: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |       ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:452:33: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  452 |     philj = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |             ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:449:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |     philj = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  450 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp: In member function 'LAMMPS_NS::PairLJSmooth::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:144:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:142:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  142 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_lj_smooth.cpp:139:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  139 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  140 |                              lj4[itype][jtype]) - offset[itype][jtype];
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_soft.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp: In member function 'LAMMPS_NS::PairMIECut::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp:394:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  394 |             fpair = factor_mie*forcemie*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_mie_cut.cpp:397:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  397 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  398 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_ufm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_ufm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_ufm.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_yukawa.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_yukawa.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_yukawa.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp: In member function 'LAMMPS_NS::PairTable::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:1019:10: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1019 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
      |         ~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:1019:37: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1019 |       ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) * tb->deltasq6;
      |                                    ~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp: In member function 'LAMMPS_NS::PairTable::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:171:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:171:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:168:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp: In member function 'LAMMPS_NS::PairTable::read_table(LAMMPS_NS::PairTable::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_table.cpp:426:38: warning: 'rfile' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |     if (tb->rflag && fabs(rnew-rfile)/rfile > EPSILONR) rerror++;
      |                      ~~~~~~~~~~~~~~~~^~~~~~
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zero.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zero.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zero.cpp
[ 41%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/potential_file_reader.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/potential_file_reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/potential_file_reader.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp: In member function 'LAMMPS_NS::PairZBL::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp:135:34: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  135 |               (sw3[itype][jtype] + sw4[itype][jtype]*t);
      |               ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp: In member function 'LAMMPS_NS::PairZBL::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/pair_zbl.cpp:378:26: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |       (sw3[itype][jtype] + sw4[itype][jtype]*t);
      |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_park.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_park.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/random_park.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp: In member function 'LAMMPS_NS::ProcMap::output(char*, int*, int***)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:693:16: warning: 'kme' may be used uninitialized in this function [-Wmaybe-uninitialized]
  693 |   vec[5] = kme + 1;
      |            ~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:692:16: warning: 'jme' may be used uninitialized in this function [-Wmaybe-uninitialized]
  692 |   vec[4] = jme + 1;
      |            ~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:691:16: warning: 'ime' may be used uninitialized in this function [-Wmaybe-uninitialized]
  691 |   vec[3] = ime + 1;
      |            ~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp: In member function 'LAMMPS_NS::ProcMap::best_factors(int, int**, int*, int, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/procmap.cpp:887:10: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
  887 |   return index;
      |          ^~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/read_data.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp: In member function 'LAMMPS_NS::RanMars::select_subset(long, int, int*, int*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/random_mars.cpp:219:38: warning: 'activeall[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  219 |       thresh = 1.0 * (nmark-ntarget) / activeall[mode];
      |                ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp: In member function 'LAMMPS_NS::RCB::compute(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp:577:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  577 |       if (readnumber == 2) MPI_Send(nullptr,0,MPI_INT,procpartner2,0,world);
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp:504:31: warning: 'valuehalf_select' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |     if (me < procmid) hi[dim] = valuehalf;
      |                       ~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp: In member function 'LAMMPS_NS::RCB::compute_old(int, int, double**, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/rcb.cpp:1069:36: warning: 'procpartner2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |       if (readnumber == 2) MPI_Send(nullptr,0,MPI_INT,procpartner2,0,world);
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/reader.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp: In member function 'void LAMMPS_NS::ReadRestart::check_eof_magic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_restart.cpp:1198:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
 1198 |     fread(str,sizeof(char),n,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp: In member function 'LAMMPS_NS::ReadDump::seek(long, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/read_dump.cpp:309:19: warning: 'ntimestep' may be used uninitialized in this function [-Wmaybe-uninitialized]
  309 |     if (ntimestep < nrequest) ntimestep = -1;
      |         ~~~~~~~~~~^~~~~~~~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_native.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_native.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_native.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/reader_xyz.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cone.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cone.cpp
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp: In member function 'LAMMPS_NS::Region::surface(double, double, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp:191:34: warning: 'xorig[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |       contact[i].delz = xorig[2] - zs;
      |                         ~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp:190:34: warning: 'xorig[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |       contact[i].dely = xorig[1] - ys;
      |                         ~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region.cpp:189:34: warning: 'xorig[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |       contact[i].delx = xorig[0] - xs;
      |                         ~~~~~~~~~^~~~
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_deprecated.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_deprecated.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_deprecated.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp: In member function 'LAMMPS_NS::RegBlock::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp:335:14: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |   add_contact(0,x,xp,yp,zp);
      |   ~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp:335:14: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_block.cpp:335:14: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_intersect.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_intersect.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/region_intersect.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp: In member function 'LAMMPS_NS::RegCylinder::surface_exterior(double*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp:717:16: warning: 'zp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  717 |     add_contact(0,x,xp,yp,zp);
      |     ~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp:717:16: warning: 'yp' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_cylinder.cpp:717:16: warning: 'xp' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 42%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/region_plane.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/special.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/special.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp: In member function 'LAMMPS_NS::Run::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:56:10: warning: 'start' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |   bigint start,stop;
      |          ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:147:27: warning: 'last' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |     for (int i = first; i <= last; i++) {
      |                         ~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:61:7: warning: 'first' may be used uninitialized in this function [-Wmaybe-uninitialized]
   61 |   int first,last;
      |       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/run.cpp:56:16: warning: 'stop' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |   bigint start,stop;
      |                ^~~~
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[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/update.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/universe.cpp: In member function 'LAMMPS_NS::Universe::reorder(char*, char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/universe.cpp:146:17: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
  146 |   MPI_Comm_split(uorig,0,key,&uworld);
      |   ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'int LAMMPS_NS::Variable::next(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:712:14: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  712 |         fread(buf,1,64,fp);
      |         ~~~~~^~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/verlet.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/verlet.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_coeff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_coeff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_coeff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp: In member function 'LAMMPS_NS::Velocity::set(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:536:61: warning: 'yvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  536 |     if (ystyle == EQUAL) vy = input->variable->compute_equal(yvar);
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:541:61: warning: 'zvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |     if (zstyle == EQUAL) vz = input->variable->compute_equal(zvar);
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:531:61: warning: 'xvar' may be used uninitialized in this function [-Wmaybe-uninitialized]
  531 |     if (xstyle == EQUAL) vx = input->variable->compute_equal(xvar);
      |                               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:457:8: warning: 'vz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  457 |     vz *= zscale;
      |     ~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:453:8: warning: 'vy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  453 |     vy *= yscale;
      |     ~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:449:8: warning: 'vx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |     vx *= xscale;
      |     ~~~^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:26:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp: In member function 'LAMMPS_NS::Velocity::create(double, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/memory.h:172:10: warning: 'vhold' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |     sfree(array);
      |     ~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/velocity.cpp:165:12: note: 'vhold' was declared here
  165 |   double **vhold;
      |            ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::group_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:4032:20: warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4032 |     newtree->value = value;
      |     ~~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::special_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:4309:30: warning: 'nvec' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4309 |     if (method == AVE) value /= nvec;
      |                        ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:4114:20: warning: 'nstride' may be used uninitialized in this function [-Wmaybe-uninitialized]
 4114 |     int index,nvec,nstride;
      |                    ^~~~~~~
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_data.cpp
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_dump.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_dump.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_dump.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::evaluate(char*, LAMMPS_NS::Variable::Tree**, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:2208:7: warning: 'op' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2208 |       if (op == NOT && expect == ARG) {
      |       ^~
[ 44%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_restart.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/write_restart.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/write_restart.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::math_function(char*, char*, LAMMPS_NS::Variable::Tree**, LAMMPS_NS::Variable::Tree**, int&, double*, int&, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:3555:38: warning: 'value2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3555 |       argstack[nargstack++] = value1 + value2*randomequal->gaussian();
      |                               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:3450:35: warning: 'value1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3450 |       argstack[nargstack++] = sqrt(value1);
      |                               ~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp: In member function 'LAMMPS_NS::Variable::compute_atom(int, int, double*, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/variable.cpp:1005:11: warning: 'vstore' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1005 |   double *vstore;
      |           ^~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp: In member function 'LAMMPS_NS::ComputeERotateAsphere::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp:138:35: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |         inertia[0] = tbonus[tri[i]].inertia[0];
      |                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp:129:32: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  129 |         length = lbonus[line[i]].length;
      |                                ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/compute_erotate_asphere.cpp:108:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  108 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nve_asphere_noforce.cpp: In member function 'LAMMPS_NS::FixNVEAsphereNoforce::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/fix_nve_asphere_noforce.cpp:88:33: warning: 'bonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
   88 |       shape = bonus[ellipsoid[i]].shape;
      |                                 ^
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp: In member function 'LAMMPS_NS::PairGayBerne::gayberne_analytic(int, int, double (*) [3], double (*) [3], double (*) [3], double (*) [3], double (*) [3], double (*) [3], double*, double, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:726:36: warning: 'deta2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  726 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
      |                               ~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:725:36: warning: 'deta2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  725 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
      |                               ~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:724:36: warning: 'deta2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  724 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
      |                               ~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:726:30: warning: 'dchi2[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  726 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
      |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:725:30: warning: 'dchi2[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  725 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
      |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:724:30: warning: 'dchi2[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  724 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
      |                ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:726:45: warning: 'MEM[(double *)&dUr2 + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  726 |     rtor[2] = (temp1*dchi2[2]+temp2*deta2[2]+temp3*dUr2[2]) * -1.0;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:725:45: warning: 'MEM[(double *)&dUr2 + 8B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  725 |     rtor[1] = (temp1*dchi2[1]+temp2*deta2[1]+temp3*dUr2[1]) * -1.0;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:724:45: warning: 'MEM[(double *)&dUr2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  724 |     rtor[0] = (temp1*dchi2[0]+temp2*deta2[0]+temp3*dUr2[0]) * -1.0;
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:44: warning: 'MEM[(double *)&r12hat + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |                                            ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:573:10: note: 'MEM[(double *)&r12hat + 16B]' was declared here
  573 |   double r12hat[3];
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:643:27: warning: 'MEM[(double *)&r12hat + 8B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  643 |   dchi[1] = temp2*(iota[1]-temp1*r12hat[1]);
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:21: warning: 'MEM[(double *)&r12hat]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |          ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:573:10: note: 'MEM[(double *)&r12hat]' was declared here
  573 |   double r12hat[3];
      |          ^~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp: In member function 'LAMMPS_NS::PairGayBerne::gayberne_lj(int, int, double (*) [3], double (*) [3], double (*) [3], double*, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:44: warning: 'MEM[(double *)&r12hat + 16B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |                                            ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:748:10: note: 'MEM[(double *)&r12hat + 16B]' was declared here
  748 |   double r12hat[3];
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:828:27: warning: 'MEM[(double *)&r12hat + 8B]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  828 |   dchi[1] = temp2*(iota[1]-temp1*r12hat[1]);
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:21:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/math_extra.h:303:21: warning: 'MEM[(double *)&r12hat]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |   return v1[0]*v2[0]+v1[1]*v2[1]+v1[2]*v2[2];
      |          ~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_gayberne.cpp:748:10: note: 'MEM[(double *)&r12hat]' was declared here
  748 |   double r12hat[3];
      |          ^~~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_nparticle.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_nparticle.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_line_lj.cpp: In member function 'LAMMPS_NS::PairLineLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_line_lj.cpp:303:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  304 |                            evdwl,0.0,fpair,delx,dely,delz);
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polygon.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp: In member function 'LAMMPS_NS::PairTriLJ::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_tri_lj.cpp:377:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  378 |                            evdwl,0.0,fpair,delx,dely,delz);
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_resquared.cpp: In member function 'LAMMPS_NS::PairRESquared::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE/pair_resquared.cpp:192:26: warning: 'one_eng' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |         if (eflag) evdwl = factor_lj*one_eng;
      |                    ~~~~~~^~~~~~~~~~~~~~~~~~~
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nh_body.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nh_body.cpp
[ 45%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nph_body.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nph_body.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_nph_body.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp: In member function 'LAMMPS_NS::BodyRoundedPolyhedron::data_body(int, int, int, int*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/body_rounded_polyhedron.cpp:213:7: warning: 'nedges' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |   int nedges,nentries;
      |       ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polygon.cpp: In member function 'LAMMPS_NS::FixWallBodyPolygon::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polygon.cpp:336:26: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
  336 |       vertex_against_wall(i, wall_pos, x, f, torque, side,
      |       ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  337 |                           contact_list, num_contacts, facc);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polygon.cpp:299:9: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  299 |         if (delr > eradi) dz = cylradius;
      |         ^~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polyhedron.cpp: In member function 'LAMMPS_NS::FixWallBodyPolyhedron::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/fix_wall_body_polyhedron.cpp:331:28: warning: 'wall_pos' may be used uninitialized in this function [-Wmaybe-uninitialized]
  331 |         sphere_against_wall(i, wall_pos, side, vwall, x, v, f, angmom, torque);
      |         ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp: In member function 'LAMMPS_NS::PairBodyNparticle::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_nparticle.cpp:325:27: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  325 |       if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  326 |                            evdwl,0.0,fpair,delx,dely,delz);
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/angle_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/angle_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/angle_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/bond_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/bond_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/bond_class2.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp: In member function 'LAMMPS_NS::PairBodyRoundedPolygon::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp:107:15: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |   int nei,nej,iefirst,jefirst;
      |               ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp:107:7: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
  107 |   int nei,nej,iefirst,jefirst;
      |       ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polygon.cpp:106:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  106 |   int ni,nj,npi,npj,ifirst,jfirst;
      |                     ^~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/dihedral_class2.cpp.o
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[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp: In member function 'LAMMPS_NS::PairBodyRoundedPolyhedron::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:219:21: warning: 'eradi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  219 |       if (r > eradi + eradj + cut_inner) continue;
      |               ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:122:43: warning: 'iefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
      |                                           ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:122:35: warning: 'nei' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
      |                                   ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY/pair_body_rounded_polyhedron.cpp:122:21: warning: 'ifirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |   int ni,nj,npi,npj,ifirst,jfirst,nei,nej,iefirst,jefirst;
      |                     ^~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:465:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  465 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  466 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:465:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  465 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp: In member function 'LAMMPS_NS::PairLJClass2::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp:395:19: warning: 'r2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  395 |             fpair = factor_lj*forcelj*r2inv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2.cpp:398:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  399 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp: In member function 'LAMMPS_NS::ImproperClass2::angleangle(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/improper_class2.cpp:814:15: warning: 'eimproper' may be used uninitialized in this function [-Wmaybe-uninitialized]
  814 |       ev_tally(i1,i2,i3,i4,nlocal,newton_bond,eimproper,
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  815 |                fabcd[0],fabcd[2],fabcd[3],
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~
  816 |                delxAB,delyAB,delzAB,delxBC,delyBC,delzBC,
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  817 |                delxBD-delxBC,delyBD-delyBC,delzBD-delzBC);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:145:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  146 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_cut.cpp:145:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/fix_wall_colloid.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:942:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  942 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  943 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:942:43: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  942 |     philj = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:935:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  935 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:935:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  935 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:938:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  938 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:933:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  933 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:541:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:516:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  516 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:541:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:541:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:544:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:544:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:181:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:186:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:189:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  190 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:189:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:183:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2/pair_lj_class2_coul_long.cpp:183:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp: In member function 'LAMMPS_NS::PairBrownianPoly::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp:77:26: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
   77 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
      |                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian_poly.cpp:77:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
   77 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
      |                     ^~~~
[ 46%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp: In member function 'LAMMPS_NS::PairBrownian::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp:305:37: warning: 'a_pu' may be used uninitialized in this function [-Wmaybe-uninitialized]
  305 |           Fbmag = prethermostat*sqrt(a_pu);
      |                                 ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_brownian.cpp:93:21: warning: 'a_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
   93 |   double xl[3],a_sq,a_sh,a_pu,Fbmag;
      |                     ^~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU_poly.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU_poly.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricateU_poly.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp: In member function 'LAMMPS_NS::PairColloid::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp:541:20: warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |   return factor_lj*phi;
      |                    ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp: In member function 'LAMMPS_NS::PairColloid::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_colloid.cpp:192:22: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |       f[i][2] += delz*fpair;
      |                  ~~~~^~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID/pair_lubricate_poly.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_freeze.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_freeze.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:240:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  240 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:238:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  238 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:236:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_cut.cpp:245:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  246 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                                     ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:295:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:292:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE/pair_lj_cut_dipole_long.cpp:300:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  300 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  301 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran_region.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran_region.cpp
[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_gran_hertz_history.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_gran_hertz_history.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_gran_hertz_history.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp: In member function 'LAMMPS_NS::FixPour::pre_exchange()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:692:7: warning: 'natom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  692 |   int ninserted_mols = ninserted_atoms / natom;
      |       ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:708:31: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  708 |       atom->nbonds += onemols[imol]->nbonds * ninserted_mols;
      |                               ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:660:65: warning: 'denstmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  660 |           atom->rmass[n] = 4.0*MY_PI/3.0 * radtmp*radtmp*radtmp * denstmp;
      |                            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_pour.cpp:503:22: warning: 'radtmp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  503 |         coords[0][3] = radtmp;
      |         ~~~~~~~~~~~~~^~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp: In member function 'LAMMPS_NS::FixWallGran::granular(double, double, double, double, double*, double, double*, double*, double*, double*, double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/fix_wall_gran.cpp:1205:24: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1205 |     F_pulloff = 3*MY_PI*coh*Reff;
      |                 ~~~~~~~^~~~
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[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald.cpp.o
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[ 47%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp: In member function 'LAMMPS_NS::PairGranular::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1604:36: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1604 |       fs1 = -k_tangential*history[0] - damp_tangential*vtr1;
      |                           ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1493:13: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1493 |     t0 = coh*coh*R2*R2*E;
      |          ~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1493:20: warning: 'R2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1493 |     t0 = coh*coh*R2*R2*E;
      |          ~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp: In member function 'LAMMPS_NS::PairGranular::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:403:19: warning: 'allhistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
  403 |           history = &allhistory[size_history*jj];
      |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:520:28: warning: 'history' may be used uninitialized in this function [-Wmaybe-uninitialized]
  520 |                 history[1] = Fscrit*fs2/fs + damp_tangential*vtr2;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:182:8: warning: 'touch' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |   int *touch,**firsttouch;
      |        ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:407:30: warning: 'coh' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |           F_pulloff = 3*MY_PI*coh*Reff;
      |                       ~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:240:34: warning: 'firsthistory' may be used uninitialized in this function [-Wmaybe-uninitialized]
  240 |       allhistory = firsthistory[i];
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:239:27: warning: 'firsttouch' may be used uninitialized in this function [-Wmaybe-uninitialized]
  239 |       touch = firsttouch[i];
      |                           ^
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole_spin.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole_spin.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_dipole_spin.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp: In member function 'LAMMPS_NS::PairGranular::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1013:36: warning: 'tangential_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1013 |         tangential_coeffs[i][j][k] = tangential_coeffs[j][i][k] =
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1014 |           tangential_coeffs_one[k];
      |           ~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1013:36: warning: 'tangential_coeffs_one[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1009:36: warning: 'tangential_coeffs_one[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1009 |         tangential_coeffs[i][j][0] = tangential_coeffs[j][i][0] =
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1010 |           tangential_coeffs_one[0];
      |           ~~~~~~~~~~~~~~~~~~~~~~~~  
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:994:36: warning: 'normal_coeffs_one[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  994 |           FOURTHIRDS*mix_stiffnessE(Emod[i][j],Emod[i][j],
      |                      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
  995 |                                     poiss[i][j],poiss[i][j]);
      |                                     ~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR/pair_granular.cpp:1000:32: warning: 'normal_coeffs_one[3]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1000 |         normal_coeffs[i][j][3] = normal_coeffs[j][i][3] = normal_coeffs_one[3];
      |         ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_disp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_disp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/ewald_disp.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp: In function 'void fft_3d(double (*)[2], double (*)[2], int, fft_plan_3d*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp:72:9: warning: variable 'total' set but not used [-Wunused-but-set-variable]
   72 |   int i,total,length,offset,num;
      |         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp:72:15: warning: variable 'length' set but not used [-Wunused-but-set-variable]
   72 |   int i,total,length,offset,num;
      |               ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d.cpp:72:22: warning: unused variable 'offset' [-Wunused-variable]
   72 |   int i,total,length,offset,num;
      |                      ^~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/fft3d_wrap.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp: In member function 'LAMMPS_NS::PairBornCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:567:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:567:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  567 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  568 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:560:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:560:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:563:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  563 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:558:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  558 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp: In member function 'LAMMPS_NS::PairBornCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:241:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  241 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:241:60: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  241 |     phiborn = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  242 |       d[itype][jtype]*r2inv*r6inv - offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~                           
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:237:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:236:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp: In member function 'LAMMPS_NS::PairBornCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:190:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:182:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:191:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_long.cpp:184:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp: In member function 'LAMMPS_NS::MSM::direct(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1662:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1662 |                 v5sum += v5_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1661:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1661 |                 v4sum += v4_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1660:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                 v3sum += v3_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1659:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1659 |                 v2sum += v2_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1658:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1658 |                 v1sum += v1_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:1657:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1657 |                 v0sum += v0_directn[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp: In member function 'LAMMPS_NS::PairBornCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:182:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:179:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  179 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:178:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_born_coul_msm.cpp:183:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp: In member function 'LAMMPS_NS::MSM::direct_top(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2013:23: warning: 'v5sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2013 |                 v5sum += v5_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2012:23: warning: 'v4sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2012 |                 v4sum += v4_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2011:23: warning: 'v3sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2011 |                 v3sum += v3_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2010:23: warning: 'v2sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2010 |                 v2sum += v2_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2009:23: warning: 'v1sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2009 |                 v1sum += v1_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/msm.cpp:2008:23: warning: 'v0sum' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2008 |                 v0sum += v0_direct_top[k] * qtmp2;
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_long_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_long_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_long_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp: In member function 'LAMMPS_NS::PairBuckCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:548:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:548:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                      ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:541:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:541:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  541 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:544:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:539:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  539 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp: In member function 'LAMMPS_NS::PairBuckCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:193:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:185:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:190:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:193:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:187:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_long.cpp:187:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:236:36: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |               ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:236:53: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |     phibuck = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                      ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:232:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  232 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:231:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  231 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:178:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:175:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:174:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_buck_coul_msm.cpp:178:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp: In member function 'LAMMPS_NS::PairCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:374:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:376:20: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  376 |     table = etable[itable] + fraction*detable[itable];
      |                    ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:376:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  376 |     table = etable[itable] + fraction*detable[itable];
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:374:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp: In member function 'LAMMPS_NS::PairCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:198:13: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:200:20: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  200 |     table = etable[itable] + fraction*detable[itable];
      |                    ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:200:11: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  200 |     table = etable[itable] + fraction*detable[itable];
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:198:13: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |     phicoul = prefactor*egamma;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp: In member function 'LAMMPS_NS::PairCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:158:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  158 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:158:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:160:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_long.cpp:160:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 48%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp: In member function 'LAMMPS_NS::PairCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:138:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:138:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:140:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  140 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_coul_msm.cpp:140:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  140 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:971:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  971 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:963:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  963 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:963:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  963 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:966:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  966 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:961:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  961 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:546:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  546 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:519:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  519 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:546:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  546 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:546:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  546 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:549:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:195:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:200:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  200 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:204:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  204 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:197:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_long.cpp:204:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  204 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:514:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  514 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  506 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:506:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  506 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:509:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  509 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:504:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |       phicoul = prefactor*egamma;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1028:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1028 |       philj6 = -lj4[itype][jtype]*r6inv +
      |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1029 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1023:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1023 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1011:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1011 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1011:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1011 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1014:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1014 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:1009:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1009 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:929:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  929 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  930 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:921:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  921 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:921:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  921 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:924:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  924 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:919:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  919 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:208:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:203:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  203 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:205:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:212:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:378:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:405:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |               forcecoul = prefactor * fgamma;
      |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:377:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmm_coul_msm.cpp:408:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:606:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:570:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  570 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:606:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:606:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:609:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:609:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:512:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  512 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:535:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:535:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  535 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:538:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  538 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:538:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  538 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:216:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  216 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:221:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  221 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:237:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |               evdwl6 = -lj4[itype][jtype]*r6inv +
      |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
  238 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:218:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  218 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:218:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  218 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_charmmfsw_coul_long.cpp:229:36: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  229 |               evdwl12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:182:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:187:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:191:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  192 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:184:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_long.cpp:184:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_coul_long.cpp.o
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[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSM::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:464:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  465 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:456:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:459:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  459 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:454:15: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |       phicoul = prefactor*egamma;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSM::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:198:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:193:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:202:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  202 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  203 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:195:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSM::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:355:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  355 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:378:25: warning: 'fgamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               forcecoul = prefactor * fgamma;
      |               ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:354:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  354 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  381 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_coul_msm.cpp:381:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  381 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  410 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:410:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:412:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:405:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:404:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  404 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:348:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:347:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  347 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_cut_tip4p_long.cpp:412:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:446:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:448:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  448 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:441:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:440:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  440 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:384:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:383:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  383 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:448:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  448 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute_inner()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:714:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  714 |             f[jH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:710:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  710 |             f[jH1][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:683:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  683 |             f[iH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:679:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  679 |             f[iH1][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute_middle()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:975:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  975 |             f[jH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:971:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  971 |             f[jH1][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:944:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  944 |             f[iH2][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:940:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  940 |             f[iH1][0] += fH[0];
      |               ^~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_cg.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_cg.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_cg.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1416:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1416 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1415:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1415 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1345:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1345 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_lj_long_tip4p_long.cpp:1344:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1344 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp: In member function 'LAMMPS_NS::PairTIP4PLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:378:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:378:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:380:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:373:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:372:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  372 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:316:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  316 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:315:24: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  315 |             vlist[n++] = iH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pair_tip4p_long.cpp:380:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 49%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE/pppm_dipole_spin.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/fix_qeq_comb.cpp: In member function 'LAMMPS_NS::FixQEQComb::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/fix_qeq_comb.cpp:162:32: warning: 'ilist' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |   int i,ii,iloop,loopmax,inum,*ilist;
      |                                ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/fix_qeq_comb.cpp:162:26: warning: 'inum' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |   int i,ii,iloop,loopmax,inum,*ilist;
      |                          ^~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::TORSION(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:1238:22: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1238 |             ev_tally4(i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl);
      |             ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::Spbicubic(double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:3906:24: warning: 'yn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3906 |       if (j > 0) df[1] += c * ((double) j) * xn * yn1;
      |                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::Sptricubic(double, double, double, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:3946:26: warning: 'zn1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3946 |         if (k > 0) df[2] += c * kr * xn * yn * zn1;
      |                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp: In member function 'LAMMPS_NS::PairAIREBO::FLJ(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:808:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  808 |           fpair = dC*dwij / rij;
      |                   ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:852:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  852 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:847:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  847 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:847:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  847 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:852:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  852 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:823:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  823 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:819:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  819 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:819:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  819 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:823:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  823 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:852:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  852 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:847:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  847 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:823:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  823 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:819:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  819 |           fpair1 = dC*dwikS*wkjS / rikS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:878:21: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  878 |             v_tally4(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS);
      |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_airebo.cpp:878:21: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 50%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_alloy.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_alloy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_alloy.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp: In member function 'LAMMPS_NS::PairComb3::comb_zetaterm_d(double, double, double, double, double, double*, double, double*, double, double*, double*, double*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp:2197:18: warning: 'com6' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2197 |             {com6+=prefac_ij2*pcrossk*dfc_k;}
      |              ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp: In member function 'LAMMPS_NS::PairComb3::force_zeta(LAMMPS_NS::PairComb3::Param*, LAMMPS_NS::PairComb3::Param*, double, double, double, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, int, double&, double, double, int, int, int, double, double, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp:1682:13: warning: 'prady' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1682 |      prady  += 1.0 *  btor[2] * bbtor * att_eng;
      |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_comb3.cpp:1681:13: warning: 'pradx' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1681 |      pradx  += 1.0 *  btor[1] * bbtor * att_eng;
      |      ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp: In member function 'LAMMPS_NS::PairBOP::sigmaBo(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1672:56: warning: 'r_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1672 |                     dcA_ikj[2][1]=(-dis_ik[2]*r_ik*r_jk-cosAng_ikj
      |                                   ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
 1673 |                         *-dis_jk[2]*r_ik*r_ik)/(r_ik*r_ik*r_jk*r_jk);
      |                         ~~~~~~~~~~~~~~~~~~~~~~          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1397:30: warning: 'temp_jk' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1397 |             bt_sg[nb_jk].temp=temp_jk;
      |             ~~~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1660:52: warning: 'dis_jk[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
      |                                 ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1660:62: warning: 'dis_jk[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
      |                                                     ~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:1661:25: warning: 'dis_jk[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1660 |                     cosAng_ikj=(dis_ik[0]*dis_jk[0]+dis_ik[1]*dis_jk[1]
      |                                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1661 |                         +dis_ik[2]*dis_jk[2])/(r_ik*r_jk);
      |                         ^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_bop.cpp:3386:20: warning: 'temp_ji' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3386 |               else if(temp_kk==temp_ji&&setting==0) {
      |                    ^~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_cd.cpp: In member function 'LAMMPS_NS::PairEAMCD::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_eam_cd.cpp:390:24: warning: 'D_i' may be used uninitialized in this function [-Wmaybe-uninitialized]
  390 |           fpair += D_i * rhojp * t1;
      |                    ~~~~^~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp: In member function 'LAMMPS_NS::PairPolymorphic::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:201:9: warning: 'emb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  201 |         if (emb > epsilon) {
      |         ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:292:29: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |         if (evflag) ev_tally(i,i,nlocal,newton_pair,evdwl,0.0,0.0,delx,dely,delz);
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:292:29: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY/pair_polymorphic.cpp:292:29: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_widom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_widom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp: In member function 'LAMMPS_NS::FixBondSwap::post_integrate()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:491:34: warning: 'jlast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  491 |   if (jlast >= 0) jlasttag = tag[jlast];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:489:34: warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  489 |   if (jprev >= 0) jprevtag = tag[jprev];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:454:36: warning: 'jnext' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |   for (jbond = 0; jbond < num_bond[jnext]; jbond++)
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:486:34: warning: 'ilast' may be used uninitialized in this function [-Wmaybe-uninitialized]
  486 |   if (ilast >= 0) ilasttag = tag[ilast];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:484:34: warning: 'iprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  484 |   if (iprev >= 0) iprevtag = tag[iprev];
      |                                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:452:36: warning: 'inext' may be used uninitialized in this function [-Wmaybe-uninitialized]
  452 |   for (ibond = 0; ibond < num_bond[inext]; ibond++)
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:413:24: warning: 'jnextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  413 |               angle_eng(jnextangletype,j,jnext,jlast);
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:412:24: warning: 'jangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |               angle_eng(jangletype,jprev,j,jnext) -
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:411:24: warning: 'inextangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  411 |               angle_eng(inextangletype,i,inext,ilast) -
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:410:24: warning: 'iangletype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  410 |               angle_eng(iangletype,iprev,i,inext) -
      |               ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_bond_swap.cpp:450:36: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
  450 |   for (jbond = 0; jbond < num_bond[j]; jbond++)
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_tfmc.cpp: In member function 'LAMMPS_NS::FixTFMC::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_tfmc.cpp:254:15: warning: 'masstotal' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |     group->xcm(igroup,masstotal,cm);
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[ 51%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/pair_dsmc.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/pair_dsmc.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/pair_dsmc.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_gcmc.cpp: In member function 'LAMMPS_NS::FixGCMC::energy_full()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC/fix_gcmc.cpp:2293:11: warning: 'imolecule' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2293 |           if (imolecule == molecule[j]) continue;
      |           ^~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/compute_msd_nongauss.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/compute_msd_nongauss.cpp
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/compute_ti.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/compute_ti.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/compute_ti.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp: In member function 'LAMMPS_NS::ServerMC::loop()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:117:19: warning: 'xold[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |           x[m][2] = xold[2];
      |           ~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:116:19: warning: 'xold[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |           x[m][1] = xold[1];
      |           ~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:115:19: warning: 'xold[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
  115 |           x[m][0] = xold[0];
      |           ~~~~~~~~^~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:15:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/atom.h:356:50: warning: 'atomid' may be used uninitialized in this function [-Wmaybe-uninitialized]
  356 |     else if (map_style == 2) return map_find_hash(global);
      |                                     ~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE/server_mc.cpp:43:10: note: 'atomid' was declared here
   43 |   tagint atomid;
      |          ^~~~~~
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[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp: In function 'xdr3dfcoord(XDR*, float*, int*, float*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp:1140:35: warning: 'bitsizeint[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1140 |         thiscoord[2] = receivebits(buf, bitsizeint[2]);
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp:1139:35: warning: 'bitsizeint[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1139 |         thiscoord[1] = receivebits(buf, bitsizeint[1]);
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/dump_xtc.cpp:1138:35: warning: 'bitsizeint[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1138 |         thiscoord[0] = receivebits(buf, bitsizeint[0]);
      |                        ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_gld.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_gld.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_gld.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_deposit.cpp: In member function 'LAMMPS_NS::FixDeposit::pre_exchange()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_deposit.cpp:601:31: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  601 |       atom->nbonds += onemols[imol]->nbonds;
      |                               ^~~~
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_oneway.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp: In member function 'LAMMPS_NS::FixEvaporate::pre_exchange()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_evaporate.cpp:325:31: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  325 |         } else if (me == proc && i == iatom) {
      |                    ~~~~~~~~~~~^~~~~~~~~~~~~
[ 52%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_orient_fcc.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp: In member function 'LAMMPS_NS::FixTTM::read_initial_electron_temperatures(char const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp:362:32: warning: 'iznode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp:362:24: warning: 'iynode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/fix_ttm.cpp:362:16: warning: 'ixnode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                ^~~~~~
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[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/xdr_compat.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/xdr_compat.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/xdr_compat.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairNMCutCoulCut::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp:478:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  478 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
      |                                           ~~~^~~~~~~~~~~~~~~~~~~~
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/compute_mliap.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/compute_mliap.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/compute_mliap.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp: In member function 'LAMMPS_NS::PairNMCutCoulCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp:150:65: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             evdwl = e0nm[itype][jtype]*(mm[itype][jtype] *
      |                                        ~~~~~~~~~~~~~~~~~~~       
  150 |                                         r0n[itype][jtype]*rninv -
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~^
  151 |                                         nn[itype][jtype] *
      |                                         ~~~~~~~~~~~~~~~~~~       
  152 |                                         r0m[itype][jtype]*rminv) -
      |                                         ~~~~~~~~~~~~~~~~~~~~~~~~ 
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_cut.cpp:152:58: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  151 |                                         nn[itype][jtype] *
      |                                         ~~~~~~~~~~~~~~~~~~
  152 |                                         r0m[itype][jtype]*rminv) -
      |                                         ~~~~~~~~~~~~~~~~~^~~~~~
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_data.cpp
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairNMCutCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:550:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  550 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:550:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  550 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:553:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  553 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:548:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:560:46: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |        nn[itype][jtype]*r0m[itype][jtype]/pow(r,mm[itype][jtype])) -
      |                                           ~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp: In member function 'LAMMPS_NS::PairNMCutCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:183:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:188:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:193:57: warning: 'rninv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               (mm[itype][jtype]*r0n[itype][jtype]*rninv -
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  194 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:194:50: warning: 'rminv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |                nn[itype][jtype]*r0m[itype][jtype]*rminv) - offset[itype][jtype];
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:185:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC/pair_nm_cut_coul_long.cpp:185:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 53%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP/mliap_descriptor_snap.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_cvff.cpp: In member function 'LAMMPS_NS::ImproperCvff::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_cvff.cpp:207:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  207 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/improper_cvff.cpp:206:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       p = 2.0 - p;
      |       ~~^~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:198:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmm::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:501:43: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  501 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                   ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmImplicit::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  131 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm_implicit.cpp:131:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  131 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmm::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmm_coul_charmm.cpp:167:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp.o
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[ 55%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/atom_vec_peri.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:533:14: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  533 |       philj6 = -lj4[itype][jtype]*r6inv +
      |       ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
  534 |         lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:528:16: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  528 |         (r3inv - cut_lj3inv)*(r3inv - cut_lj3inv);;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp: In member function 'LAMMPS_NS::PairLJCharmmfswCoulCharmmfsh::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:195:22: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |               evdwl6 = -lj4[itype][jtype]*r6inv +
      |               ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |                 lj4[itype][jtype]*cut_lj_inner3inv*cut_lj3inv;
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_charmmfsw_coul_charmmfsh.cpp:187:36: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               evdwl12 = lj3[itype][jtype]*cut_lj6*denom_lj12 *
      |                                    ^~~~~
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_damage_atom.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:378:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:377:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:321:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  321 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_lj_cut_tip4p_cut.cpp:301:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  301 |             f[iH1][0] += fH[0];
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp: In member function 'LAMMPS_NS::PairTIP4PCut::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:336:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  336 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:335:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:279:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE/pair_tip4p_cut.cpp:259:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  259 |             f[iH1][0] += fH[0];
      |               ^~~
[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_plasticity_atom.cpp.o
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[ 56%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/fix_peri_neigh.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp: In member function 'LAMMPS_NS::ComputeDilatationAtom::compute_peratom()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI/compute_dilatation_atom.cpp:101:11: warning: 'theta' may be used uninitialized in this function [-Wmaybe-uninitialized]
  101 |   double *theta;
      |           ^~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS/fix_poems.cpp: In member function 'LAMMPS_NS::FixPOEMS::readfile(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS/fix_poems.cpp:960:33: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  960 |     if (me == 0) nlen = readline(fp,&line,&maxline);
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~~
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[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp: In member function 'LAMMPS_NS::FixHyperGlobal::pre_reverse(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:310:20: warning: 'r0max' may be used uninitialized in this function [-Wmaybe-uninitialized]
  310 |     fbiasr = fbias / r0max / rmax;
      |              ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:310:12: warning: 'rmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  310 |     fbiasr = fbias / r0max / rmax;
      |     ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:306:27: warning: 'jmax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  306 |     delx = x[imax][0] - x[jmax][0];
      |                           ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_hyper_global.cpp:306:14: warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized]
  306 |     delx = x[imax][0] - x[jmax][0];
      |              ^~~~
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/neb.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/neb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/neb.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp: In member function 'LAMMPS_NS::FixNEB::min_post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp:608:45: warning: 'lenuntilIm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  608 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
      |                                  ~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp:608:45: warning: 'idealPos' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/fix_neb.cpp:608:58: warning: 'meanDist' may be used uninitialized in this function [-Wmaybe-uninitialized]
  608 |       prefactor = -dot - kspring*(lenuntilIm-idealPos)/(2*meanDist);
      |                                                        ~~^~~~~~~~~~
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/prd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/prd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/prd.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/tad.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/tad.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/tad.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp: In member function 'LAMMPS_NS::Hyper::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'biasoverlap' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:262:10: note: 'biasoverlap' was declared here
  262 |   double biasoverlap;
      |          ^~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'allghost_toofar' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:42: note: 'allghost_toofar' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |                                          ^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'rmaxeverbig' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:30: note: 'rmaxeverbig' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |                              ^~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'rmaxever' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:21: note: 'rmaxever' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |                     ^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'tbondbuild' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:261:10: note: 'tbondbuild' was declared here
  261 |   double tbondbuild,rmaxever,rmaxeverbig,allghost_toofar;
      |          ^~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'avebiasnow' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:260:42: note: 'avebiasnow' was declared here
  260 |   double maxbondperatom,neighbondperbond,avebiasnow;
      |                                          ^~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'neighbondperbond' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:260:25: note: 'neighbondperbond' was declared here
  260 |   double maxbondperatom,neighbondperbond,avebiasnow;
      |                         ^~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'maxbondperatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:260:10: note: 'maxbondperatom' was declared here
  260 |   double maxbondperatom,neighbondperbond,avebiasnow;
      |          ^~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'maxbiascoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:63: note: 'maxbiascoeff' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                                                               ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'minbiascoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:50: note: 'minbiascoeff' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                                                  ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'avebiascoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:37: note: 'avebiascoeff' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                                     ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'avenbias' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:28: note: 'avenbias' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                            ^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'aveboost' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:19: note: 'aveboost' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |                   ^~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/format.h:44,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:31,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:14:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/fmt/core.h:1843:57: warning: 'nnewbond' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1843 |   const auto& vargs = detail::make_args_checked<Args...>(format_str, args...);
      |                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/hyper.cpp:259:10: note: 'nnewbond' was declared here
  259 |   double nnewbond,aveboost,avenbias,avebiascoeff,minbiascoeff,maxbiascoeff;
      |          ^~~~~~~~
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/temper.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/temper.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/temper.cpp
[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA/verlet_split.cpp.o
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[ 57%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/compute_erotate_rigid.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_ehex.cpp: In member function 'LAMMPS_NS::FixEHEX::init()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_ehex.cpp:198:40: warning: 'id_shake' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |      fshake = ((FixShake*) modify->fix[id_shake]);
      |                                        ^~~~~~~~
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nh_small.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nh_small.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nh_small.cpp
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nph.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nph.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nph.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::set_xv()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1507:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1507 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1502:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1502 |         lbonus[line[i]].theta = theta;
      |                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1486:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1486 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1430:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1430 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1429:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1429 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1429:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1429 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nph_small.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nph_small.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_nph_small.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::set_v()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1652:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1652 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1639:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1639 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1601:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1601 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1600:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1600 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1600:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1600 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2248:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2248 |           radone = lbonus[line[i]].length;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::readfile(int, double*, double**, double**, double**, int*, int*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2318:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2318 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp: In member function 'LAMMPS_NS::FixRigid::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:1836:8: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1836 |   int *inbody;
      |        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2128:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2128 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2045:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2045 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid.cpp:2110:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2110 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
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[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_msst.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_msst.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_msst.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::set_xv()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1422:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1422 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1417:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1417 |         lbonus[line[i]].theta = theta;
      |                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1402:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1402 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::set_v()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1560:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1560 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1547:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1547 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::setup_bodies_dynamic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2408:34: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2408 |           radone = lbonus[line[i]].length;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::write_restart_file(char const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2680:22: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2680 |   if (me == 0) fclose(fp);
      |                ~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::FixRigidSmall(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:483:57: warning: 'seed' may be used uninitialized in this function [-Wmaybe-uninitialized]
  483 |   if (langflag) random = new RanMars(lmp,seed + comm->me);
      |                                                         ^
[ 58%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_nphug.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_nphug.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_nphug.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::readfile(int, double**, int*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2491:41: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2491 |     eofflag = comm->read_lines_from_file(fp,nchunk,MAXLINE,buffer);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp: In member function 'LAMMPS_NS::FixRigidSmall::setup_bodies_static()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:1985:8: warning: 'inbody' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1985 |   int *inbody;
      |        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2270:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2270 |         inertiaatom = tbonus[tri[i]].inertia;
      |                                    ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2185:38: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2185 |         orient[i][0] = lbonus[line[i]].theta - theta_body;
      |                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID/fix_rigid_small.cpp:2252:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2252 |         shape = ebonus[ellipsoid[i]].shape;
      |                                    ^
[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/atom_vec_spin.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/compute_spin.cpp.o
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[ 59%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN/fix_langevin_spin.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp: In member function 'LAMMPS_NS::FixWallPiston::post_integrate()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK/fix_wall_piston.cpp:287:36: warning: 'zlo' may be used uninitialized in this function [-Wmaybe-uninitialized]
  287 |       if (zloflag && x[i][2] < zlo - roughoff) {
      |                                ~~~~^~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/fix_store_kim.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/fix_store_kim.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp: In member function 'LAMMPS_NS::FixWallSRD::FixWallSRD(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_wall_srd.cpp:53:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |       int newwall;
      |           ^~~~~~~
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_init.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_init.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_init.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_interactions.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_interactions.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_interactions.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::big_static()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2968:25: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2968 |       c1 = tbonus[tri[i]].c1;
      |                         ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2956:30: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2956 |       length = lbonus[line[i]].length;
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2940:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2940 |       shape = ebonus[ellipsoid[i]].shape;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::big_dynamic()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:3051:30: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3051 |       inertia = tbonus[tri[i]].inertia;
      |                              ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:3038:40: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3038 |       biglist[k].theta = lbonus[line[i]].theta;
      |                                        ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:3026:34: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 3026 |       shape = ebonus[ellipsoid[i]].shape;
      |                                  ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::reset_velocities()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1019:33: warning: 'dof_tstat' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1019 |       tbin = vbin[i].value[0]/(n-dof_tstat) * tfactor;
      |                               ~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::parameterize()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2589:55: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2589 |         double length3 = MathExtra::len3(tbonus[tri[i]].c3);
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2705:41: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2705 |           double length = lbonus[line[i]].length;
      |                                         ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:2681:46: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2681 |           double *shape = ebonus[ellipsoid[i]].shape;
      |                                              ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_param.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_param.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_param.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp: In member function 'LAMMPS_NS::FixSRD::collisions_multi()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1549:17: warning: 'xbcollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1549 |       xbcoll[1] = xbcollfirst[1];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1548:17: warning: 'xbcollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1548 |       xbcoll[0] = xbcollfirst[0];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1550:17: warning: 'xbcollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1550 |       xbcoll[2] = xbcollfirst[2];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1547:17: warning: 'xscollfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1547 |       xscoll[2] = xscollfirst[2];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1546:17: warning: 'xscollfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1546 |       xscoll[1] = xscollfirst[1];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1545:17: warning: 'xscollfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1545 |       xscoll[0] = xscollfirst[0];
      |       ~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1553:15: warning: 'normfirst[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1553 |       norm[2] = normfirst[2];
      |       ~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1552:15: warning: 'normfirst[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1552 |       norm[1] = normfirst[1];
      |       ~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1551:15: warning: 'normfirst[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1551 |       norm[0] = normfirst[0];
      |       ~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1580:12: warning: 'typefirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1580 |       else if (type != WALL)
      |            ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD/fix_srd.cpp:1579:49: warning: 'jfirst' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1579 |         force_torque(v[i],vsnew,xscoll,xbcoll,f[j],nullptr);
      |                                                 ^
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_property.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_property.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_property.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_units.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_units.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_units.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp: In member function 'void LAMMPS_NS::KimQuery::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:95:9: warning: variable 'varname' set but not used [-Wunused-but-set-variable]
   95 |   char *varname, *function, *value;
      |         ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:95:19: warning: variable 'function' set but not used [-Wunused-but-set-variable]
   95 |   char *varname, *function, *value;
      |                   ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:95:30: warning: unused variable 'value' [-Wunused-variable]
   95 |   char *varname, *function, *value;
      |                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/kim_query.cpp:101:10: warning: variable 'model_name' set but not used [-Wunused-but-set-variable]
  101 |   char * model_name;
      |          ^~~~~~~~~~
[ 60%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM/pair_kim.cpp.o
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[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::end_of_step()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp:89:14: warning: unused variable 'result' [-Wunused-variable]
   89 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp: In member function 'virtual void LAMMPS_NS::FixPythonInvoke::post_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_invoke.cpp:106:14: warning: unused variable 'result' [-Wunused-variable]
  106 |   PyObject * result = PyEval_CallObject((PyObject*)pFunc, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::init()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:141:14: warning: unused variable 'result' [-Wunused-variable]
  141 |   PyObject * result = PyEval_CallObject(py_init, nullptr);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:159:14: warning: unused variable 'result' [-Wunused-variable]
  159 |   PyObject * result = PyEval_CallObject(py_initial_integrate, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:177:14: warning: unused variable 'result' [-Wunused-variable]
  177 |   PyObject * result = PyEval_CallObject(py_final_integrate, nullptr);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::initial_integrate_respa(int, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:195:14: warning: unused variable 'result' [-Wunused-variable]
  195 |   PyObject * result = PyEval_CallObject(py_initial_integrate_respa, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::final_integrate_respa(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:214:14: warning: unused variable 'result' [-Wunused-variable]
  214 |   PyObject * result = PyEval_CallObject(py_final_integrate_respa, arglist);
      |              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp: In member function 'virtual void LAMMPS_NS::FixPythonMove::reset_dt()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/fix_python_move.cpp:232:14: warning: unused variable 'result' [-Wunused-variable]
  232 |   PyObject * result = PyEval_CallObject(py_reset_dt, nullptr);
      |              ^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_cfg_mpiio.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_cfg_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_cfg_mpiio.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp: In constructor 'LAMMPS_NS::PythonImpl::PythonImpl(LAMMPS_NS::LAMMPS*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp:56:22: warning: 'void PyEval_InitThreads()' is deprecated [-Wdeprecated-declarations]
   56 |   PyEval_InitThreads();
      |                      ^
In file included from /usr/include/python3.9/Python.h:145,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_compat.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON/python_impl.cpp:23:
/usr/include/python3.9/ceval.h:130:37: note: declared here
  130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
      |                                     ^~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp
In file included from /usr/include/string.h:519,
                 from /usr/include/openmpi-riscv64/openmpi/ompi/mpi/cxx/functions_inln.h:22,
                 from /usr/include/openmpi-riscv64/openmpi/ompi/mpi/cxx/mpicxx.h:270,
                 from /usr/include/openmpi-riscv64/mpi.h:2868,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_atom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:19:
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpAtomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:384:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset [100, 107] is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpAtomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:387:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 108 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpAtomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:390:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 116 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpAtomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:393:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 120 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_xyz_mpiio.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_xyz_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_xyz_mpiio.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/restart_mpiio.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/restart_mpiio.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/restart_mpiio.cpp
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI/compute_voronoi_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI/compute_voronoi_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI/compute_voronoi_atom.cpp
In file included from /usr/include/string.h:519,
                 from /usr/include/openmpi-riscv64/openmpi/ompi/mpi/cxx/functions_inln.h:22,
                 from /usr/include/openmpi-riscv64/openmpi/ompi/mpi/cxx/mpicxx.h:270,
                 from /usr/include/openmpi-riscv64/mpi.h:2868,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/dump_custom.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:19:
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpCustomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:430:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset [100, 107] is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpCustomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:433:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 108 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpCustomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:436:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 116 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'memcpy',
    inlined from 'LAMMPS_NS::DumpCustomMPIIO::header_binary_triclinic(long)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:439:11:
/usr/include/bits/string_fortified.h:29:33: warning: 'memcpy' offset 120 is out of the bounds [0, 100] [-Warray-bounds]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC/fix_atc.cpp.o
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[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna2_fene.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna2_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna2_fene.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/fix_bocs.cpp: In member function 'int LAMMPS_NS::FixBocs::read_F_table(char*, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/fix_bocs.cpp:691:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  691 |     for (int i = 0; i < inputLines.size(); ++i) {
      |                     ~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'LAMMPS_NS::ComputePressureBocs::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp:334:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |       scalar = (temperature->dof * boltz * t +
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  335 |                 virial[0] + virial[1] + virial[2]) / 3.0 *
      |                 ~~~~~~~~~                     
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp: In member function 'LAMMPS_NS::ComputePressureBocs::compute_vector()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS/compute_pressure_bocs.cpp:396:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  396 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
      |                    ~~~~~~~~~~~^
[ 61%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna_fene.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna_fene.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA/bond_oxdna_fene.cpp
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DenseMatrix.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/MatrixLibrary.h:4,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_TypeDefs.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/ATC_Method.h:5,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC/fix_atc.cpp:23:
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(const ATC_matrix::Matrix<T>&) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:93:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(const ATC::MatrixDependencyManager<T, U>&) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:182:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:529:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  529 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:538:24: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  538 |           (*this)(i,j) *= R[i];
      |           ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:546:20: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  546 |         (*this)[i] *= R[i];
      |         ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h: In instantiation of 'ATC_matrix::Matrix<T>& ATC_matrix::Matrix<T>::operator*=(T) [with T = bool]':
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:58:   required from 'void ATC::MatrixDependencyManager<T, U>::operator*=(U) [with T = ATC_matrix::DenseMatrix; U = bool]'
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/DependencyManager.h:167:18:   required from here
/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc/Matrix.h:612:60: warning: '*' in boolean context, suggest '&&' instead [-Wint-in-bool-context]
  612 |   int sz=this->size(); for(INDEX i=0; i<sz; i++) (*this)[i]*=v;
      |                                                  ~~~~~~~~~~^~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp: In member function 'LAMMPS_NS::PairEDPD::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp:222:34: warning: 'dQr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  222 |           Q[j]    -= ( dQc - dQd + dQr );
      |                      ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp:222:28: warning: 'dQd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  222 |           Q[j]    -= ( dQc - dQd + dQr );
      |                        ~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD/pair_edpd.cpp:222:28: warning: 'dQc' may be used uninitialized in this function [-Wmaybe-uninitialized]
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[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/fix_colvars.cpp: In member function 'virtual void LAMMPS_NS::FixColvars::setup(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/fix_colvars.cpp:563:33: warning: unused variable 'id' [-Wunused-variable]
  563 |     std::vector<int>           &id = *(proxy->modify_atom_ids());
      |                                 ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp: In function 'write_group(_IO_FILE*, int, LAMMPS_NS::Atom*, LAMMPS_NS::Group*, int, int, ompi_communicator_t*, _IO_FILE*, _IO_FILE*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp:121:7: warning: 'cols' may be used uninitialized in this function [-Wmaybe-uninitialized]
  121 |       if (j == cols) {
      |       ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp: In member function 'LAMMPS_NS::Group2Ndx::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/group_ndx.cpp:171:11: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |     fclose(fp);
      |     ~~~~~~^~~~
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_saed.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_saed.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/compute_saed.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp: In member function 'LAMMPS_NS::Ndx2Group::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS/ndx_group.cpp:145:30: warning: 'fp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |           tags = read_section(fp,num);
      |                  ~~~~~~~~~~~~^~~~~~~~
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[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/atom_vec_dpd.cpp.o
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[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'LAMMPS_NS::FixSAEDVTK::invoke_vector(long)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:427:57: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
  427 |         snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
      |                                                         ^~  ~~~~~
In file included from /usr/include/stdio.h:866,
                 from /usr/include/openmpi-riscv64/openmpi/ompi/mpi/cxx/mpicxx.h:54,
                 from /usr/include/openmpi-riscv64/mpi.h:2868,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:19:
/usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 31 and 158 bytes into a destination of size 128
   70 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   71 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_dpd_energy.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_dpd_energy.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_dpd_energy.cpp
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/compute_dpd_atom.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp: In member function 'LAMMPS_NS::FixSAEDVTK::options(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:554:59: warning: '%s' directive output may be truncated writing up to 127 bytes into a region of size 98 [-Wformat-truncation=]
  554 |           snprintf(str,128,"Cannot open fix saed/vtk file %s",nName);
      |                                                           ^~  ~~~~~
In file included from /usr/include/stdio.h:866,
                 from /usr/include/openmpi-riscv64/openmpi/ompi/mpi/cxx/mpicxx.h:54,
                 from /usr/include/openmpi-riscv64/mpi.h:2868,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.h:23,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION/fix_saed_vtk.cpp:19:
/usr/include/bits/stdio2.h:70:35: note: '__snprintf_chk' output between 31 and 158 bytes into a destination of size 128
   70 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   71 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 64%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_eos_cv.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_rx.cpp: In member function 'void LAMMPS_NS::FixRX::initSparse()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/fix_rx.cpp:580:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  580 |     for (int i = 1; i < nu_bin.size(); ++i)
      |                     ~~^~~~~~~~~~~~~~~
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_dpd_fdt.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp: In member function 'LAMMPS_NS::NPairHalfBinNewtonSSA::build(LAMMPS_NS::NeighList*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:39: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |                   which = find_special(onemols[imol]->special[iatom],
      |                           ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  206 |                                        onemols[imol]->nspecial[iatom],
      |                                        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  207 |                                        tag[j]-tagprev);
      |                                        ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:63: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |                   which = find_special(onemols[imol]->special[iatom],
      |                                                               ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/npair_half_bin_newton_ssa.cpp:205:48: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |                   which = find_special(onemols[imol]->special[iatom],
      |                                                ^~~~
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp: In member function 'void LAMMPS_NS::PairMultiLucy::read_table(LAMMPS_NS::PairMultiLucy::Table*, char*, char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp:370:47: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  370 |     for (int i = 0; i < tb->ninput; i++) fgets(line,MAXLINE,fp);
      |                                          ~~~~~^~~~~~~~~~~~~~~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp: In member function 'LAMMPS_NS::PairExp6rx::getMixingWeights(int, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&, double&) const':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1227:32: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1227 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
      |                                ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1241:35: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1241 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
      |                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1220:32: warning: 'nMolecules1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1220 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
      |                                ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1234:35: warning: 'nMoleculesOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1234 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
      |                                   ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1227:5: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1227 |     if(fraction2 < -MY_EPSILON || nMolecules2 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1241:5: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1241 |     if(fractionOld2 < -MY_EPSILON || nMoleculesOld2 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1220:5: warning: 'fraction1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1220 |     if(fraction1 < -MY_EPSILON || nMolecules1 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_exp6_rx.cpp:1234:5: warning: 'fractionOld1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1234 |     if(fractionOld1 < -MY_EPSILON || nMoleculesOld1 < -MY_EPSILON){
      |     ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp: In member function 'LAMMPS_NS::PairMultiLucy::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy.cpp:191:44: warning: 'j' may be used uninitialized in this function [-Wmaybe-uninitialized]
  191 |     if (rho[i]*rho[i] < tb->innersq || rho[j]*rho[j] < tb->innersq)
      |                                            ^
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/compute_temp_drude.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/compute_temp_drude.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/compute_temp_drude.cpp
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp: In member function 'LAMMPS_NS::PairMultiLucyRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1011:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1011 |     mixWtSite2old = fractionOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1012:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |     mixWtSite2 = fraction2;
      |     ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1016:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1016 |     mixWtSite2old = nMoleculesOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_multi_lucy_rx.cpp:1017:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1017 |     mixWtSite2 = nMolecules2;
      |     ~~~~~~~~~~~^~~~~~~~~~~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude_transform.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude_transform.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/fix_drude_transform.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp: In member function 'LAMMPS_NS::PairTableRX::getMixingWeights(int, double&, double&, double&, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:578:16: warning: 'nMolecules2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  578 |     mixWtSite2 = nMolecules2;
      |     ~~~~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:577:19: warning: 'nMoleculesOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  577 |     mixWtSite2old = nMoleculesOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:573:16: warning: 'fraction2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  573 |     mixWtSite2 = fraction2;
      |     ~~~~~~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD/pair_table_rx.cpp:572:19: warning: 'fractionOld2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  572 |     mixWtSite2old = fractionOld2;
      |     ~~~~~~~~~~~~~~^~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp: In member function 'LAMMPS_NS::PairCoulTT::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp:161:46: warning: 'dj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           dcoul = qqrd2e * ( -(q[i]+q[di])*q[dj] - q[di]*(q[j]+q[dj]) ) * scale[itype][jtype] * rinv;
      |                                              ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_coul_tt.cpp:161:39: warning: 'di' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           dcoul = qqrd2e * ( -(q[i]+q[di])*q[dj] - q[di]*(q[j]+q[dj]) ) * scale[itype][jtype] * rinv;
      |                                       ^~
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[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF/compute_ke_atom_eff.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF/compute_ke_atom_eff.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF/compute_ke_atom_eff.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:234:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  233 |             if (drudetype[type[i]] != NOPOL_TYPE &&
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  234 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:235:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  235 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:198:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:235:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
  235 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:227:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  227 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:232:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  232 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:229:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  229 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:240:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  240 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  241 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:230:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  230 |               ecoul = qi*qj * table;
      |                       ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE/pair_lj_cut_thole_long.cpp:229:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  229 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 65%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF/compute_ke_eff.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_cut_soft.cpp:365:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  365 |     phicoul = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_long_soft.cpp:373:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |     prefactor = force->qqrd2e * lam1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_coul_long_soft.cpp:374:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:963:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  963 |       (1.0/(denlj*denlj) - 1.0/denlj);
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:955:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  955 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:956:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  956 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:501:18: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  501 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
      |            ~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:496:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  496 |     phicoul = force->qqrd2e *lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:523:18: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  523 |       (2.0/(denlj*sqrt(denlj)) - 3.0/denlj) - offset[itype][jtype];
      |            ~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:517:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  517 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:516:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  516 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:527:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  527 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:549:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  549 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
      |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:548:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  548 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_cut_soft.cpp:144:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:187:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               (1.0/(denlj*denlj) - 1.0/denlj);
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:180:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_charmm_coul_long_soft.cpp:181:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:159:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_class2_coul_long_soft.cpp:160:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:498:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  498 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:493:13: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  493 |     phicoul = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp:737:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  737 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                            ~~~^~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoft::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:909:31: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  909 |       (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                            ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:901:15: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  901 |     prefactor = force->qqrd2e * lj1[itype][jtype] * atom->q[i]*atom->q[j] / denc;
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:902:13: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  902 |     phicoul = prefactor*erfc;
      |     ~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:149:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_cut_soft.cpp:145:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp: In member function 'LAMMPS_NS::PairLJCutSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_soft.cpp:412:29: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |         if (evflag) ev_tally(i,j,nlocal,newton_pair,
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
  413 |                              evdwl,0.0,fpair,delx,dely,delz);
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoft::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:492:24: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  492 |             eprefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:44: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  508 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:509:46: warning: 'fprefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  509 |             if (factor_coul < 1.0) forcecoul -= (1.0-factor_coul)*fprefactor;
      |                                    ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:44: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  508 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:508:53: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  508 |             forcecoul = fprefactor * (erfc + EWALD_F*grij*expm2);
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:175:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:168:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_coul_long_soft.cpp:169:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_morse_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_morse_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_morse_soft.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD/dump_h5md.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:392:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:391:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:335:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_lj_cut_tip4p_long_soft.cpp:315:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  315 |             f[iH1][0] += fH[0];
      |               ^~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_manifoldforce.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoft::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:360:24: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  360 |             vlist[n++] = jH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:359:24: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  359 |             vlist[n++] = jH1;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:303:24: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |             vlist[n++] = iH2;
      |             ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP/pair_tip4p_long_soft.cpp:283:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |             f[iH1][0] += fH[0];
      |               ^~~
[ 67%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD/fix_nve_manifold_rattle.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp: In member function 'void potdata::readpot(const char*, const char*, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:394:13: warning: variable 'dp' set but not used [-Wunused-but-set-variable]
  394 |    double f,dp;
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:375:18: warning: variable 'alm' set but not used [-Wunused-but-set-variable]
  375 |  double alp = al,alm = al;
      |                  ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:158:19: warning: variable 'dr' set but not used [-Wunused-but-set-variable]
  158 |   double x0,x1,dx,dr;
      |                   ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:187:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  187 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:203:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  203 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:246:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  246 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:306:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  306 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:329:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  329 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:331:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  331 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:334:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  334 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:343:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  343 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:345:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  345 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:358:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  358 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp: In function 'void getparmindata(const char*, int*, double*, double*, double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:109:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  109 |     fgets(line,sizeof(line),in);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:119:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  119 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_readpot.cpp:123:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  123 |       fgets(line,sizeof(line),in);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~~~~
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/mgpt_splinetab.cpp.o
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[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC/meam_setup_done.cpp: In member function 'LAMMPS_NS::MEAM::phi_meam(double, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC/meam_setup_done.cpp:454:21: warning: 'rho0_2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  454 |     rhobar2 = rho02 / rho_bkgd2 * G2;
      |               ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC/meam_setup_done.cpp:453:21: warning: 'rho0_1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  453 |     rhobar1 = rho01 / rho_bkgd1 * G1;
      |               ~~~~~~^~~~~~~~~~~
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift_exp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift_exp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_cosine_shift_exp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::compute_x(const int*, const int* const*, double*, double*, double*, double*, int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:593:24: warning: unused variable 'mx' [-Wunused-variable]
  593 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
      |                        ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:593:27: warning: unused variable 'itag' [-Wunused-variable]
  593 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
      |                           ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:593:32: warning: unused variable 'jtag' [-Wunused-variable]
  593 |   int i,j,k,m,ix,jx,kx,mx,itag,jtag,p;
      |                                ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:598:10: warning: unused variable 'nbc' [-Wunused-variable]
  598 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
      |          ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:598:20: warning: unused variable 'tbl' [-Wunused-variable]
  598 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
      |                    ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:598:30: warning: unused variable 'tbm' [-Wunused-variable]
  598 |   double nbc = 0.0,tbl = 0.0,tbm = 0.0;
      |                              ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:599:13: warning: unused variable 'lmax_local' [-Wunused-variable]
  599 |   const int lmax_local = lmax;
      |             ^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:608:10: warning: variable 't0' set but not used [-Wunused-but-set-variable]
  608 |   double t0,t1;
      |          ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:608:13: warning: variable 't1' set but not used [-Wunused-but-set-variable]
  608 |   double t0,t1;
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:617:18: warning: unused variable 'tsort' [-Wunused-variable]
  617 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
      |                  ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:617:42: warning: unused variable 'tlookup' [-Wunused-variable]
  617 |   double tx0,tx1,tsort = 0.0,tpair = 0.0,tlookup = 0.0;
      |                                          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:619:10: warning: unused variable 'ntsort' [-Wunused-variable]
  619 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
      |          ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:619:36: warning: unused variable 'ntlookup' [-Wunused-variable]
  619 |   double ntsort = 0.0,ntpair = 0.0,ntlookup = 0.0;
      |                                    ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'virtual void LAMMPS_NS::PairMGPT::coeff(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:1837:9: warning: variable 'volpres_tag' set but not used [-Wunused-but-set-variable]
 1837 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
      |         ^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:1837:25: warning: variable 'precision_tag' set but not used [-Wunused-but-set-variable]
 1837 |     int volpres_tag = 0,precision_tag = 0,nbody_tag = 0;
      |                         ^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_5_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2252:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2252 |   MAKE_ELEMENT_5(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2287:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2287 |   MAKE_ELEMENT_5(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2315:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2315 |   MAKE_ELEMENT_5(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2336:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2336 |   MAKE_ELEMENT_5(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2148:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
 2148 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2149:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
 2149 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2150:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
 2150 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2151:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
 2151 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2350:3: note: in expansion of macro 'MAKE_ELEMENT_5'
 2350 |   MAKE_ELEMENT_5(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: In member function 'void LAMMPS_NS::PairMGPT::hamltn_7_raw(double, double, double, double (*)[8], double (*)[8], double (*)[8], double (*)[8], double*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 64))[1]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 64))[1]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 64))[1]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 64))[1]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2472:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2472 |   MAKE_ELEMENT_7(1,1);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 128))[2]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 128))[2]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 128))[2]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 128))[2]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2577:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2577 |   MAKE_ELEMENT_7(2,2);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 192))[3]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 192))[3]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 192))[3]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 192))[3]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2667:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2667 |   MAKE_ELEMENT_7(3,3);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 256))[4]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 256))[4]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 256))[4]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 256))[4]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2742:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2742 |   MAKE_ELEMENT_7(4,4);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 320))[5]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 320))[5]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 320))[5]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 320))[5]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2802:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2802 |   MAKE_ELEMENT_7(5,5);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 384))[6]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 384))[6]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 384))[6]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 384))[6]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2846:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2846 |   MAKE_ELEMENT_7(6,6);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2167:14: warning: operation on '(*(M + 448))[7]' may be undefined [-Wsequence-point]
 2167 |     M [j][i] = M[i][j] =  fl  *tmp;                                  \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2168:14: warning: operation on '(*(Mx + 448))[7]' may be undefined [-Wsequence-point]
 2168 |     Mx[j][i] = Mx[i][j] = fl_x*tmp + fl_ri*(tmpx - x*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2169:14: warning: operation on '(*(My + 448))[7]' may be undefined [-Wsequence-point]
 2169 |     My[j][i] = My[i][j] = fl_y*tmp + fl_ri*(tmpy - y*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2170:14: warning: operation on '(*(Mz + 448))[7]' may be undefined [-Wsequence-point]
 2170 |     Mz[j][i] = Mz[i][j] = fl_z*tmp + fl_ri*(tmpz - z*tmpsum);        \
      |     ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:2876:3: note: in expansion of macro 'MAKE_ELEMENT_7'
 2876 |   MAKE_ELEMENT_7(7,7);
      |   ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp: At global scope:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT/pair_mgpt.cpp:575:13: warning: 'void tr_count(const double*, const double*, double*, const double*, double*, const double*, double*)' defined but not used [-Wunused-function]
  575 | static void tr_count(const double * restrict A,
      |             ^~~~~~~~
[ 69%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/angle_dipole.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_stress_mop.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_stress_mop.cpp
[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_stress_mop_profile.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_stress_mop_profile.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_stress_mop_profile.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_pressure_grem.cpp: In member function 'LAMMPS_NS::ComputePressureGrem::compute_scalar()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/compute_pressure_grem.cpp:85:46: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |       scalar = (temperature->dof * boltz * t +
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
   86 |                 virial[0] + virial[1] + virial[2]) / 3.0 * inv_volume * nktv2p;
      |                 ~~~~~~~~~                     
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[ 70%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/dihedral_cosine_shift_exp.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_momentum_chunk.cpp: In member function 'LAMMPS_NS::FixMomentumChunk::end_of_step()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_momentum_chunk.cpp:252:29: warning: 'ke_chunk_local' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |           ke_chunk_local[m] += rmass[i] *
      |           ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
  253 |             (v[i][0]*v[i][0] + v[i][1]*v[i][1] + v[i][2]*v[i][2]);
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_momentum_chunk.cpp:169:11: warning: 'ke_chunk_old' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |   double *ke_chunk_old,*ke_chunk_new,*ke_chunk_local,*factor;
      |           ^~~~~~~~~~~~
[ 71%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_nvk.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_region_ees.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_region_ees.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_region_ees.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp: In member function 'LAMMPS_NS::FixTTMMod::read_initial_electron_temperatures(char const*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp:581:32: warning: 'iznode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp:581:24: warning: 'iynode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                        ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_ttm_mod.cpp:581:16: warning: 'ixnode' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |     T_electron[ixnode][iynode][iznode] = T_tmp;
      |                ^~~~~~
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_cossq.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_cossq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_cossq.cpp
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_distance.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_distance.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_distance.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp: In member function 'LAMMPS_NS::FixWallReflectStochastic::wall_particle(int, int, double)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp:253:9: warning: 'difftest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  253 |         if (difftest < wallaccom[m][dir]) {
      |         ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp: In member function 'LAMMPS_NS::FixWallReflectStochastic::FixWallReflectStochastic(LAMMPS_NS::LAMMPS*, int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/fix_wall_reflect_stochastic.cpp:82:11: warning: 'newwall' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |       int newwall;
      |           ^~~~~~~
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/improper_fourier.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_diel.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_diel.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp: In member function 'LAMMPS_NS::PairAGNI::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:219:34: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  219 |     if (evflag) ev_tally_xyz_full(i,0.0,0.0,fxtmp,fytmp,fztmp,delx,dely,delz);
      |                 ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:219:34: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:219:34: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp: In member function 'LAMMPS_NS::PairAGNI::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:459:62: warning: 'wantdata' may be used uninitialized in this function [-Wmaybe-uninitialized]
  459 |     } else if (params && (wantdata >=0) && (nwords == params[wantdata].numeta+3)) {
      |                                                              ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_agni.cpp:455:14: warning: 'curparam' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |       params[curparam].numeta = nwords-1;
      |              ^~~~~~~~
[ 72%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_shield.cpp.o
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[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_e3b.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_e3b.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_e3b.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulSlaterLong::read_restart(FILE*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:302:25: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  302 |       if (me == 0) fread(&setflag[i][j],sizeof(int),1,fp);
      |                    ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:305:27: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  305 |         if (me == 0) fread(&scale[i][j],sizeof(double),1,fp);
      |                      ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp: In member function 'virtual void LAMMPS_NS::PairCoulSlaterLong::read_restart_settings(FILE*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:332:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  332 |     fread(&cut_coul,sizeof(double),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:333:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  333 |     fread(&lamda,sizeof(double),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:334:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  334 |     fread(&offset_flag,sizeof(int),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_coul_slater_long.cpp:335:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  335 |     fread(&mix_flag,sizeof(int),1,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 73%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:982:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  982 |     philj = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  983 |       offset[itype][jtype];
      |       ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:974:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  974 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:974:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  974 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:977:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  977 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:972:15: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  972 |       phicoul = prefactor*erfc;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLong::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:560:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:533:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  533 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:560:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:560:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  560 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:563:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  563 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:563:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  563 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_expand_coul_long.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_spline.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_spline.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_spline.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:278:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  278 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  279 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  280 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~~
  281 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:280:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  280 |               rsq*rcutlj2inv+
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:273:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  273 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:271:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  271 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:273:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  273 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:271:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  271 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:269:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  269 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:278:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  278 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  279 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  280 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~                                          
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_sw_spline.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_sw_spline.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_meam_sw_spline.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:623:11: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  623 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  624 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  625 |       rsq*rcutlj2inv+
      |       ~~~~~~~~~~~~~~~
  626 |       rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:625:10: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  624 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  625 |       rsq*rcutlj2inv+
      |       ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:623:62: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  623 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  624 |       rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  625 |       rsq*rcutlj2inv+
      |       ~~~~~~~~~~~~~~                                          
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:618:29: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  618 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:616:30: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  616 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:13: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:618:13: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  618 |       ecoul += qtmp * r3inv * qpfac * pjdotr;
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:616:13: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  616 |       ecoul += -q[j] * r3inv * pqfac * pidotr;
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_lj_sf_dipole_sf.cpp:614:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |       ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                       ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_momb.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_momb.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_momb.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp: In member function 'LAMMPS_NS::PairLocalDensity::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/pair_local_density.cpp:492:19: warning: 'index' may be used uninitialized in this function [-Wmaybe-uninitialized]
  492 |         if (LD[k][index] <= rho_min[k]) {
      |                   ^~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/improper_inversion_harmonic.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/improper_inversion_harmonic.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/temper_npt.cpp: In member function 'LAMMPS_NS::TemperNPT::command(int, char**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC/temper_npt.cpp:308:16: warning: 'boltz_factor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  308 |         fprintf(universe->uscreen,"SWAP %d & %d: yes = %d,Ts = %d %d, PEs = %g %g, Bz = %g %g, vol = %g %g\n",
      |         ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  309 |                me_universe,partner,swap,my_set_temp,partner_set_temp,
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  310 |                pe,pe_partner,boltz_factor,exp(boltz_factor), vol, vol_partner);
      |                ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/angle_cosine_buck6d.cpp: In member function 'LAMMPS_NS::AngleCosineBuck6d::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/angle_cosine_buck6d.cpp:179:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  179 |         evdwl = ebuck6d - offset[itype][jtype];
      |         ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/angle_cosine_buck6d.cpp:164:11: warning: 'r32inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  164 |     fpair = forcebuck6d * r32inv;
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/dynamical_matrix.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/dynamical_matrix.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/dynamical_matrix.cpp
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussDSF::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:558:9: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  558 |     eng += phicoul;
      |     ~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:556:34: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  556 |     phicoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
      |                            ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:551:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  551 |     phibuck6d = ebuck6d - offset[itype][jtype];
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussDSF::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:192:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |             ecoul = prefactor * (erfcc - r*e_shift_ij[itype][jtype] -
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:194:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_dsf.cpp:187:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             evdwl = ebuck6d - offset[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 74%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/third_order.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/third_order.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/third_order.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:211:42: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
  211 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:211:62: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  211 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                             ~~~~~~~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:211:42: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
  211 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:205:19: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |             evdwl = ebuck6d - offset[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp: In member function 'LAMMPS_NS::PairBuck6dCoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:612:36: warning: 'ealpha' may be used uninitialized in this function [-Wmaybe-uninitialized]
  612 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:612:56: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  612 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
      |                                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:612:36: warning: 'erfa' may be used uninitialized in this function [-Wmaybe-uninitialized]
  612 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor*erfa;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF/pair_buck6d_coul_gauss_long.cpp:606:15: warning: 'ebuck6d' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |     phibuck6d = ebuck6d - offset[itype][jtype];
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_alloy_types.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_alloy_types.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_alloy_types.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_canonical_coloured.cpp.o
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp: In member function 'LAMMPS_NS::FixPhonon::GaussJordan(int, std::complex<double>*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp:824:14: warning: 'irow' may be used uninitialized in this function [-Wmaybe-uninitialized]
  824 |     indxr[i] = irow;
      |     ~~~~~~~~~^~~~~~
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_canonical_coloured.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_canonical_coloured.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON/fix_phonon.cpp:787:9: warning: 'icol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |   int i,icol,irow,j,k,l,ll,idr,idc;
      |         ^~~~
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_convex_hull_incremental.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_convex_hull_incremental.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_convex_hull_incremental.cpp
[ 75%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_deformation_gradient.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_deformation_gradient.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/ptm_deformation_gradient.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp: In function 'int get_neighbours(void*, size_t, size_t, int, size_t*, int32_t*, double (*)[3])':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp:206:18: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  206 |   if (atom_index < data->nlocal) {
      |       ~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM/compute_ptm_atom.cpp:223:11: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare]
  223 |     if (j == atom_index)
      |         ~~^~~~~~~~~~~~~
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[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp
In file included from /usr/include/string.h:519,
                 from /usr/include/openmpi-riscv64/openmpi/ompi/mpi/cxx/functions_inln.h:22,
                 from /usr/include/openmpi-riscv64/openmpi/ompi/mpi/cxx/mpicxx.h:270,
                 from /usr/include/openmpi-riscv64/mpi.h:2868,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/pointers.h:25,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/fix.h:17,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.h:27,
                 from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:18:
In function 'strncpy',
    inlined from 'LAMMPS_NS::FixBondReact::write_restart(_IO_FILE*)' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:3617:12:
/usr/include/bits/string_fortified.h:91:34: warning: 'strncpy' specified bound 256 equals destination size [-Wstringop-truncation]
   91 |   return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc.cpp.o
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[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_bonds.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_bonds.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_bonds.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp: In member function 'LAMMPS_NS::FixBondReact::limit_bond(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:2411:79: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2411 |     if (stabilization_flag == 1) i_statted_tags[atom->map(temp_limit_glove[i])] = 0;
      |                                                                               ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:2388:15: warning: 'temp_limit_glove' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2388 |     delete [] temp_limit_glove;
      |               ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp: In member function 'LAMMPS_NS::FixBondReact::unlimit_bond()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION/fix_bond_react.cpp:2432:8: warning: 'i_statted_tags' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2432 |   int *i_statted_tags;
      |        ^~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp: In member function 'LAMMPS_NS::FixQEqReax::pre_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_qeq_reax.cpp:544:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  544 |     qeq_time = t_end - t_start;
      |                ~~~~~~^~~~~~~~~
[ 76%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/fix_reaxc_species.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp: In member function 'LAMMPS_NS::PairReaxC::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/pair_reaxc.cpp:555:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  555 |     data->timing.nbrs = t_end - t_start;
      |                         ~~~~~~^~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_control.cpp: In function 'char Read_Control_File(char*, control_params*, output_controls*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_control.cpp:121:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  121 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp: In function 'char Read_Force_Field(FILE*, reax_interaction*, control_params*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:58:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   58 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:61:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   61 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:80:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   80 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:92:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   92 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:97:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   97 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:98:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   98 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:99:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   99 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:152:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  152 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:178:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  178 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:197:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  197 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:216:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  216 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:236:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  236 |       fgets( s, MAX_LINE, fp );
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:321:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  321 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:331:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  331 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:335:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  335 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:364:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  364 |       fgets(s,MAX_LINE,fp);
      |       ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:487:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  487 |   fgets(s,MAX_LINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:492:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  492 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:553:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  553 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:558:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  558 |     fgets(s,MAX_LINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:613:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  613 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:618:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  618 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:684:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  684 |   fgets( s, MAX_LINE, fp );
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC/reaxc_ffield.cpp:694:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  694 |     fgets( s, MAX_LINE, fp );
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/pair_sdpd_taitwater_isothermal.cpp
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp: In member function 'LAMMPS_NS::FixMesoMove::initial_integrate(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp:705:61: warning: 'dz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  705 |           if (zvarstyle == EQUAL) x[i][2] = xoriginal[i][2] + dz;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp:674:61: warning: 'dy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  674 |           if (yvarstyle == EQUAL) x[i][1] = xoriginal[i][1] + dy;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_meso_move.cpp:643:61: warning: 'dx' may be used uninitialized in this function [-Wmaybe-uninitialized]
  643 |           if (xvarstyle == EQUAL) x[i][0] = xoriginal[i][0] + dx;
      |                                             ~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'virtual void LAMMPS_NS::PairSMTBQ::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:434:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  434 |   fgets(ptr,MAXLINE,fp);
      |   ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:437:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  437 |     fgets(ptr,MAXLINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:488:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  488 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:492:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  492 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:500:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  500 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:509:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  509 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:527:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  527 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:541:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  541 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:564:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  564 |     fgets(ptr,MAXLINE,fp);  if (verbose) printf ("%s",ptr);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:567:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  567 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:620:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  620 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:632:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  632 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:654:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  654 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:667:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  667 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:674:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  674 |       fgets( ptr, MAXLINE, fp);
      |       ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:694:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  694 |     fgets(ptr,MAXLINE,fp);
      |     ~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:697:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  697 |     fgets( ptr, MAXLINE, fp);
      |     ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:707:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  707 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:718:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  718 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:721:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  721 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:726:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  726 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:734:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  734 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:737:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  737 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:744:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  744 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:747:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  747 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:757:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  757 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:760:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  760 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:765:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  765 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:791:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  791 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:794:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  794 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:802:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  802 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:812:8: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  812 |   fgets( ptr, MAXLINE, fp);
      |   ~~~~~^~~~~~~~~~~~~~~~~~~
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/atom_vec_sph.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/atom_vec_sph.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/atom_vec_sph.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'LAMMPS_NS::FixRigidMeso::set_xv()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:330:44: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  330 |       x[i][1] += xcm[ibody][1] - ybox*yprd - zbox*yz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:329:54: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  329 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:329:44: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  329 |       x[i][0] += xcm[ibody][0] - xbox*xprd - ybox*xy - zbox*xz;
      |                  ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp: In member function 'LAMMPS_NS::FixRigidMeso::set_v()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:450:12: warning: 'yz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  450 |         x1 = x[i][1] + ybox*yprd + zbox*yz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:449:12: warning: 'xz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |         ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD/fix_rigid_meso.cpp:449:34: warning: 'xy' may be used uninitialized in this function [-Wmaybe-uninitialized]
  449 |         x0 = x[i][0] + xbox*xprd + ybox*xy + zbox*xz;
      |              ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_e_atom.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_e_atom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_e_atom.cpp
[ 77%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/compute_sph_rho_atom.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'LAMMPS_NS::PairSMTBQ::tabqeq()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:1458:43: warning: 'bCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1458 |             ddij = aCoeff*(r- rc-nang) *(2+bCoeff*(r-rc-nang))*exp(bCoeff*r);
      |                                         ~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:1457:37: warning: 'aCoeff' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1457 |           if (r > rc) {dij = aCoeff *square(r- rc-nang) *exp(bCoeff*r);
      |                              ~~~~~~~^~~~~~~~~~~~~~~~~~~
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH/fix_sph.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp: In member function 'LAMMPS_NS::PairSMTBQ::Charge()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:2593:59: warning: 'gp' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2593 |     QOxInit=max(QOxInit, -0.98* params[1].qform *nQEqcall[gp]/nQEqaall[gp])   ;
      |                                                           ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ/pair_smtbq.cpp:2812:8: warning: 't_init' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2812 |     dt = t_end - t_init;
      |     ~~~^~~~~~~~~~~~~~~~
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[ 78%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF/dump_cfg_uef.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF/compute_pressure_uef.cpp: In member function 'LAMMPS_NS::ComputePressureUef::compute_vector()':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF/compute_pressure_uef.cpp:143:31: warning: 'ke_tensor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  143 |       vector[1] = (ke_tensor[1] + virial[1]) * inv_volume * nktv2p;
      |                    ~~~~~~~~~~~^
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/compute_temp_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/compute_temp_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairLJSwitch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:659:19: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  659 |     forcelj = expb*lj1[itype][jtype]*r-6.0*lj4[itype][jtype]*r6inv;
      |               ~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:693:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  693 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:676:11: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  676 |     evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |     ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  677 |         offset[itype][jtype];
      |         ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:667:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  667 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:667:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  667 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:670:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  670 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:665:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |       phicoul = prefactor*erfc1;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:684:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  684 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
      |               ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairMM3Switch3CoulGaussLong::single(int, int, int, int, double, double, double, double&)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  677 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:693:23: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  693 |   fforce = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:677:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  677 |     evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |             ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:22: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  668 |       table = etable[itable] + fraction*detable[itable];
      |                      ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:668:13: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  668 |       table = etable[itable] + fraction*detable[itable];
      |       ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:671:36: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  671 |     if (factor_coul < 1.0) phicoul -= (1.0-factor_coul)*prefactor;
      |                            ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:666:15: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  666 |       phicoul = prefactor*erfc1;
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:684:36: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  684 |         trx = (cut_lj[itype][jtype]-r)*truncwi;
      |               ~~~~~~~~~~~~~~~~~~~~~^~~
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairLJSwitch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:185:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  185 |             ecoul = prefactor*erfc1;
      |             ~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:194:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  194 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:190:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:212:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:195:17: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |           evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |           ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  196 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:203:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  203 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:187:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_lj_switch3_coulgauss_long.cpp:187:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp: In member function 'LAMMPS_NS::PairMM3Switch3CoulGaussLong::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:23: warning: 'expb' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:30: warning: 'erfc2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:188:19: warning: 'erfc1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |             ecoul = prefactor*erfc1;
      |             ~~~~~~^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:197:30: warning: 'prefactor2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |           ecoul += prefactor2*erfc2*factor_coul;
      |                    ~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:193:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:214:28: warning: 'forcecoul2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  214 |         fpair = (forcecoul + factor_coul*forcecoul2 + factor_lj*forcelj) * r2inv;
      |                  ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:198:23: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  198 |           evdwl = expb-lj4[itype][jtype]*r6inv-offset[itype][jtype];
      |                   ~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:205:42: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  205 |               trx = (cut_lj[itype][jtype]-r)*truncwi;
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:190:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF/pair_mm3_switch3_coulgauss_long.cpp:190:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp: In member function 'LAMMPS_NS::PairBornCoulDSFCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:141:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:138:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  142 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_dsf_cs.cpp:137:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  137 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
[ 79%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp:141:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp:138:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  138 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_wolf_cs.cpp:142:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  142 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:529:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  529 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:504:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  504 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:529:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  529 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:529:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  529 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:532:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  532 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:532:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  532 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:167:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:172:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:175:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:175:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:169:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_class2_coul_long_cs.cpp:169:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairBornCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:179:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  179 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:171:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:176:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:180:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:173:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_born_coul_long_cs.cpp:173:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_data.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_data.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_data.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:177:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:169:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:174:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:177:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:171:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_buck_coul_long_cs.cpp:171:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:158:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  158 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:158:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:160:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_coul_long_cs.cpp:160:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/thr_omp.cpp
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongCS::compute_outer(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:524:45: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  524 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:501:44: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  501 |               if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                      ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:524:45: warning: 'expm2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  524 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                       ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:524:54: warning: 'grij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  524 |               forcecoul = prefactor * (erfc + EWALD_F*grij*expm2);
      |                                                      ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:527:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  527 |               table = vtable[itable] + fraction*dvtable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:527:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  527 |               table = vtable[itable] + fraction*dvtable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongCS::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:170:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  170 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:175:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:178:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  179 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:172:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL/pair_lj_cut_coul_long_cs.cpp:172:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 80%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_nh_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_gromos_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_gromos_omp.cpp
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_harmonic_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_harmonic_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp: In member function 'LAMMPS_NS::BondFENEOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp:141:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp: In member function 'LAMMPS_NS::BondFENEOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_omp.cpp:141:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  141 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_morse_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_morse_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'LAMMPS_NS::BondFENEExpandOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp:145:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp: In member function 'LAMMPS_NS::BondFENEExpandOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_fene_expand_omp.cpp:145:35: warning: 'sr6' may be used uninitialized in this function [-Wmaybe-uninitialized]
  145 |         ebond += 4.0*epsilon[type]*sr6*(sr6-1.0) + epsilon[type];
      |                  ~~~~~~~~~~~~~~~~~^~~~
[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_nonlinear_omp.cpp.o
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[ 81%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/bond_quartic_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_npt_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_npt_omp.cpp
[ 83%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nve_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nve_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nve_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_xv_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:502:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  502 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:497:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  497 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:481:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  481 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_v_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:678:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  678 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:665:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_v_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:678:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  678 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:665:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp: In member function 'LAMMPS_NS::FixRigidOMP::set_v_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:678:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  678 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_omp.cpp:665:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  665 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_class2_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_class2_omp.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_qeq_reax_omp.cpp: In member function 'LAMMPS_NS::FixQEqReaxOMP::pre_force(int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_qeq_reax_omp.cpp:346:22: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |     qeq_time = t_end - t_start;
      |                ~~~~~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_xv_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:446:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  446 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:441:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:426:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_v_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:619:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  619 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:606:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_v_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:619:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  619 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:606:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp: In member function 'LAMMPS_NS::FixRigidSmallOMP::set_v_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:619:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  619 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_small_omp.cpp:606:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  606 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_harmonic_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_harmonic_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_harmonic_omp.cpp
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_umbrella_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_umbrella_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_umbrella_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:236:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |       p = 2.0 - p;
      |       ~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:236:9: warning: 'p' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |       p = 2.0 - p;
      |       ~~^~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<0, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp: In member function 'LAMMPS_NS::ImproperCvffOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cvff_omp.cpp:237:10: warning: 'pd' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |       pd = -pd;
      |       ~~~^~~~~
[ 84%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/improper_cossq_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp: In function 'LAMMPS_NS::NPairFullBinOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:111:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:49:10: note: 'tagprev' was declared here
   49 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:111:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:48:43: note: 'iatom' was declared here
   48 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:111:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_omp.cpp:48:38: note: 'imol' was declared here
   48 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp.o
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[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp: In function 'LAMMPS_NS::NPairFullBinGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:117:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  118 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  119 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:117:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:43: note: 'iatom' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:117:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_bin_ghost_omp.cpp:50:38: note: 'imol' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp: In function 'LAMMPS_NS::NPairFullMultiOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:119:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  120 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:50:10: note: 'tagprev' was declared here
   50 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:119:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:49:46: note: 'iatom' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:119:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_multi_omp.cpp:49:41: note: 'imol' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_atomonly_newton_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp: In function 'LAMMPS_NS::NPairFullNsqOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:111:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:111:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:50:36: note: 'iatom' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:111:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_omp.cpp:50:31: note: 'imol' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp: In function 'LAMMPS_NS::NPairFullNsqGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:111:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  112 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:111:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:36: note: 'iatom' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:111:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  111 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_full_nsq_ghost_omp.cpp:50:31: note: 'imol' was declared here
   50 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  117 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  118 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:43: note: 'iatom' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:116:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_omp.cpp:50:38: note: 'imol' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtoffGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:37: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  125 |                 which = find_special(onemols[imol]->special[iatom],
      |                         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  126 |                                      onemols[imol]->nspecial[iatom],
      |                                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  127 |                                      tag[j]-tagprev);
      |                                      ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:55:10: note: 'tagprev' was declared here
   55 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:61: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  125 |                 which = find_special(onemols[imol]->special[iatom],
      |                                                             ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:43: note: 'iatom' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:125:46: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  125 |                 which = find_special(onemols[imol]->special[iatom],
      |                                              ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newtoff_ghost_omp.cpp:54:38: note: 'imol' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:148:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  149 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  150 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:50:10: note: 'tagprev' was declared here
   50 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:148:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:43: note: 'iatom' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:117:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  117 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_omp.cpp:49:38: note: 'imol' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp: In function 'LAMMPS_NS::NPairHalfBinNewtonTriOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  123 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  124 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:50:10: note: 'tagprev' was declared here
   50 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:43: note: 'iatom' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:122:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  122 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_bin_newton_tri_omp.cpp:49:38: note: 'imol' was declared here
   49 |   int i,j,k,n,itype,jtype,ibin,which,imol,iatom;
      |                                      ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfMultiNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  123 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  124 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  125 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:52:10: note: 'tagprev' was declared here
   52 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  123 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:46: note: 'iatom' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:123:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  123 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newtoff_omp.cpp:51:41: note: 'imol' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfMultiNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  157 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  158 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:51:10: note: 'tagprev' was declared here
   51 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:156:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:46: note: 'iatom' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:119:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  119 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_omp.cpp:50:41: note: 'imol' was declared here
   50 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp: In function 'LAMMPS_NS::NPairHalfMultiNewtonTriOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  133 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  134 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:52:10: note: 'tagprev' was declared here
   52 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:46: note: 'iatom' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:132:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  132 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_multi_newton_tri_omp.cpp:51:41: note: 'imol' was declared here
   51 |   int i,j,k,n,itype,jtype,ibin,which,ns,imol,iatom;
      |                                         ^~~~
[ 85%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfNsqNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  113 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  114 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:53:10: note: 'tagprev' was declared here
   53 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:36: note: 'iatom' was declared here
   52 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:112:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  112 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_omp.cpp:52:31: note: 'imol' was declared here
   52 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp: In function 'LAMMPS_NS::NPairHalfNsqNewtoffGhostOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  121 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  122 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:56:10: note: 'tagprev' was declared here
   56 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:36: note: 'iatom' was declared here
   55 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                                    ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:120:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  120 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newtoff_ghost_omp.cpp:55:31: note: 'imol' was declared here
   55 |   int i,j,n,itype,jtype,which,imol,iatom;
      |                               ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfNsqNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  131 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  132 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:52:10: note: 'tagprev' was declared here
   52 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:46: note: 'iatom' was declared here
   51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
      |                                              ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:130:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  130 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_nsq_newton_omp.cpp:51:41: note: 'imol' was declared here
   51 |   int i,j,n,itype,jtype,itag,jtag,which,imol,iatom;
      |                                         ^~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaBinNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  148 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  149 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:56:10: note: 'tagprev' was declared here
   56 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:54: note: 'iatom' was declared here
   55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:147:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:49: note: 'imol' was declared here
   55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                 ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:55:40: note: 'n_middle' was declared here
   55 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                        ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:166:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  166 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:58:34: note: 'neighptr_middle' was declared here
   58 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newtoff_omp.cpp:82:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   82 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaBinNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  194 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  195 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:55:10: note: 'tagprev' was declared here
   55 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:193:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:54: note: 'iatom' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:149:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:49: note: 'imol' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                 ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:167:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:54:40: note: 'n_middle' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                        ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:212:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  212 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaBinNewtonTriOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:35: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               which = find_special(onemols[imol]->special[iatom],
      |                       ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  155 |                                    onemols[imol]->nspecial[iatom],
      |                                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  156 |                                    tag[j]-tagprev);
      |                                    ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:55:10: note: 'tagprev' was declared here
   55 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:59: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               which = find_special(onemols[imol]->special[iatom],
      |                                                           ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:54: note: 'iatom' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                      ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:154:44: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               which = find_special(onemols[imol]->special[iatom],
      |                                            ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:49: note: 'imol' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                                 ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:53: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                             ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:54:40: note: 'n_middle' was declared here
   54 |   int i,j,k,n,itype,jtype,ibin,n_inner,n_middle,imol,iatom;
      |                                        ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:173:55: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  173 |             if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                       ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:57:34: note: 'neighptr_middle' was declared here
   57 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:81:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:81:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:81:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   81 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:22:
/builddir/build/BUILD/lammps-patch_29Oct2020/src/my_page.h:74:12: warning: 'ipage_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   74 |     ndatum += n;
      |     ~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_bin_newton_tri_omp.cpp:94:16: note: 'ipage_middle' was declared here
   94 |   MyPage<int> *ipage_middle;
      |                ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newtoff_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaNsqNewtoffOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  145 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  146 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:57:10: note: 'tagprev' was declared here
   57 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:47: note: 'iatom' was declared here
   56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
      |                                               ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:144:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  144 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:42: note: 'imol' was declared here
   56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:56:33: note: 'n_middle' was declared here
   56 |   int i,j,n,itype,jtype,n_inner,n_middle,imol,iatom;
      |                                 ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:161:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:59:34: note: 'neighptr_middle' was declared here
   59 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newtoff_omp.cpp:85:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_bin_newton_tri_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp: In function 'LAMMPS_NS::NPairHalfRespaNsqNewtonOmp::build(LAMMPS_NS::NeighList*) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:33: warning: 'tagprev' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             which = find_special(onemols[imol]->special[iatom],
      |                     ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |                                  onemols[imol]->nspecial[iatom],
      |                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  164 |                                  tag[j]-tagprev);
      |                                  ~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:58:10: note: 'tagprev' was declared here
   58 |   tagint tagprev;
      |          ^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:57: warning: 'iatom' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             which = find_special(onemols[imol]->special[iatom],
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:57: note: 'iatom' was declared here
   57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
      |                                                         ^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:162:42: warning: 'imol' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             which = find_special(onemols[imol]->special[iatom],
      |                                          ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:52: note: 'imol' was declared here
   57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
      |                                                    ^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:51: warning: 'n_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                           ~~~~~~~~^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:57:43: note: 'n_middle' was declared here
   57 |   int i,j,n,itype,jtype,itag,jtag,n_inner,n_middle,imol,iatom;
      |                                           ^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:180:53: warning: 'neighptr_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |           if (which == 0) neighptr_middle[n_middle++] = j;
      |                                                     ^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:60:34: note: 'neighptr_middle' was declared here
   60 |   int *neighptr,*neighptr_inner,*neighptr_middle;
      |                                  ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:22: warning: 'numneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                      ^~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:40: warning: 'firstneigh_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |                                        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_respa_nsq_newton_omp.cpp:86:8: warning: 'ilist_middle' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |   int *ilist_middle,*numneigh_middle,**firstneigh_middle;
      |        ^~~~~~~~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/npair_half_size_nsq_newtoff_omp.cpp
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[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:178:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:178:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_wolf_omp.cpp:181:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  181 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 86%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_debye_omp.cpp.o
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[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_dsf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_cut_omp.cpp:157:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  157 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_wolf_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'LAMMPS_NS::PairLJCubicOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:150:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  150 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:147:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp: In member function 'LAMMPS_NS::PairLJCubicOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:150:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  150 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cubic_omp.cpp:147:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  147 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  160 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:19: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:159:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  160 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_omp.cpp:156:19: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * qtmp*q[j]*rinv;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp
[ 87%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_expand_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_expand_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_expand_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSFOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  177 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebyeOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebyeOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:159:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  159 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_debye_omp.cpp:162:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  162 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  163 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSFOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:183:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:176:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  177 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_dsf_omp.cpp:182:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulWolfOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulWolfOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:182:40: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |           if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                  ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_wolf_omp.cpp:175:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  176 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_omp.cpp:148:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  148 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:183:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             evdwl += ljsw5[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp: In member function 'LAMMPS_NS::PairLJGromacsCoulGromacsOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_gromacs_coul_gromacs_omp.cpp:183:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  183 |             evdwl += ljsw5[itype][jtype];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'LAMMPS_NS::PairLJSmoothOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:154:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:152:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  152 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:149:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  150 |                              lj4[itype][jtype]) - offset[itype][jtype];
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp: In member function 'LAMMPS_NS::PairLJSmoothOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:154:38: warning: 'tsq' may be used uninitialized in this function [-Wmaybe-uninitialized]
  154 |               ljsw4[itype][jtype]*tsq*tsq/4.0 - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~~~~^~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:152:41: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  152 |             evdwl = ljsw0[itype][jtype] - ljsw1[itype][jtype]*t -
      |                     ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_smooth_omp.cpp:149:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  150 |                              lj4[itype][jtype]) - offset[itype][jtype];
      |                              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_ufm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_ufm_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp: In member function 'LAMMPS_NS::PairTableOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:184:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp: In member function 'LAMMPS_NS::PairTableOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:187:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  187 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_table_omp.cpp:184:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gayberne_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gayberne_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gayberne_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_resquared_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_resquared_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_resquared_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp: In member function 'LAMMPS_NS::PairZBLOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp:149:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |               (sw3i[jtype] + sw4i[jtype]*t);
      |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp: In member function 'LAMMPS_NS::PairZBLOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_zbl_omp.cpp:149:28: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  149 |               (sw3i[jtype] + sw4i[jtype]*t);
      |               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
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[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  162 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  162 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_cut_omp.cpp:161:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  161 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_poly_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_brownian_poly_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:190:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:195:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:190:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:195:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  195 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  200 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:199:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  199 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_class2_coul_long_omp.cpp:192:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  192 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_omp.cpp
[ 88%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_poly_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_poly_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lubricate_poly_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<0, 0, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:210:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  210 |         f[j].z -= delz*fpair;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       fztmp += delz*fpair;
      |                ~~~~^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_colloid_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_yukawa_colloid_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:210:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  210 |         f[j].z -= delz*fpair;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       fztmp += delz*fpair;
      |                ~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:210:16: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  210 |         f[j].z -= delz*fpair;
      |         ~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp: In member function 'LAMMPS_NS::PairColloidOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_colloid_omp.cpp:206:20: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |       fztmp += delz*fpair;
      |                ~~~~^~~~~~
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hooke_history_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gran_hooke_history_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  256 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  261 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  262 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:256:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  256 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:254:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:252:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_dipole_cut_omp.cpp:261:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  261 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  262 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:171:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:172:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:171:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:172:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_long_omp.cpp:175:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBornCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_born_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:196:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  196 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairBuckCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:168:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  168 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:167:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  167 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_buck_coul_msm_omp.cpp:171:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  171 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  172 |             ecoul = prefactor*egamma;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:172:19: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_msm_omp.cpp:174:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  174 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:176:19: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_omp.cpp:178:28: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  178 |             table = etable[itable] + fraction*detable[itable];
      |                            ^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_msm_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:188:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  188 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:193:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:197:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  197 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  198 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_omp.cpp:190:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  190 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 89%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSMOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:189:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:184:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:193:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  194 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSMOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:189:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  189 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:184:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:193:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  193 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  194 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_msm_omp.cpp:186:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  462 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  462 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:462:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:464:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  464 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<1, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:455:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  455 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:399:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:398:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:456:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  456 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOMP::eval<0, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:437:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:384:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  384 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:380:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  380 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_omp.cpp:441:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:416:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:412:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  357 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  353 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:416:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:412:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  412 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:357:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  357 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:353:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  353 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<1, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  439 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  439 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:439:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:441:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  441 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongOMP::eval<0, 1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:432:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:374:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  374 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:373:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  373 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_omp.cpp:433:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  433 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_adp_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_adp_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_adp_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_inner(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1337:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1337 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1333:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1333 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1306:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1306 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1302:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1302 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_middle(int, int, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1599:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1599 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1595:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1595 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1568:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1568 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1564:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1564 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_morse_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_morse_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp: In member function 'LAMMPS_NS::PairAIREBOOMP::TORSION_thr(int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:1000:26: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1000 |             ev_tally4_thr(this,i,j,k,l,evdwl,fi,fj,fk,delil,del34,delkl,thr);
      |             ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_comb_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_comb_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_comb_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp: In member function 'LAMMPS_NS::PairAIREBOOMP::FLJ_thr(int, int, int, int, int, double*, LAMMPS_NS::ThrData*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:570:21: warning: 'dwij' may be used uninitialized in this function [-Wmaybe-uninitialized]
  570 |           fpair = dC*dwij / rij;
      |                   ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:614:32: warning: 'dwmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:609:33: warning: 'wmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:609:27: warning: 'dwkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:614:27: warning: 'wkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |                    ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:585:27: warning: 'dwkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  585 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:581:28: warning: 'wkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:581:22: warning: 'dwikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |           fpair1 = dC*dwikS*wkjS / rikS;
      |                    ~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:585:22: warning: 'wikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  585 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |                    ~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:614:18: warning: 'rmjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  614 |           fpair3 = dC*wikS*wkmS*dwmjS / rmjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:609:18: warning: 'rkmS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  609 |           fpair2 = dC*wikS*dwkmS*wmjS / rkmS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:585:18: warning: 'rkjS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  585 |           fpair2 = dC*wikS*dwkjS / rkjS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:581:18: warning: 'rikS' may be used uninitialized in this function [-Wmaybe-uninitialized]
  581 |           fpair1 = dC*dwikS*wkjS / rikS;
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:640:25: warning: 'atomm' may be used uninitialized in this function [-Wmaybe-uninitialized]
  640 |             v_tally4_thr(atomi,atomj,atomk,atomm,fi,fj,fk,delimS,deljmS,delkmS,thr);
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_airebo_omp.cpp:640:25: warning: 'atomk' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<0, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2003:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2003 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1999:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1999 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1933:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1933 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_alloy_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_alloy_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_alloy_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_fs_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_fs_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eam_fs_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eim_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eim_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_eim_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_rebo_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_rebo_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_rebo_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<0, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1054:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1054 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1050:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1050 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:997:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  997 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_sw_omp.cpp.o
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_sw_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_sw_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_c_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_mod_c_omp.cpp
[ 90%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_zbl_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_zbl_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_table_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_table_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_vashishta_table_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 1, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1077:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1077 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1075 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1075:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval<1, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:993:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  993 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1083:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1083 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1069:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1069 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1068:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1068 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1012:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1012 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_nm_cut_coul_long_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_lj_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_hbond_dreiding_morse_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 0, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_implicit_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulCharmmOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_charmm_omp.cpp:182:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_lps_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_lps_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_lps_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:405:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:401:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  401 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:346:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:342:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  342 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PCutOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:422:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:421:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  421 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:363:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  363 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_cut_omp.cpp:362:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_pmb_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_pmb_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_peri_pmb_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:376:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  376 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:372:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  372 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:317:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  317 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:313:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  313 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PCutOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:393:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:392:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  392 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:334:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  334 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_cut_omp.cpp:333:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 0, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_long_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 0, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 1, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 1, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sdk_coul_msm_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp: In member function 'LAMMPS_NS::PairLJLongTIP4PLongOMP::eval_outer<1, 0, 0, 1, 1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1929:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1929 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2035:40: warning: 'key' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2035 |           if (EVFLAG) ev_tally_list_thr(this,key,vlist,v,ecoul,alpha,thr);
      |                       ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:1961:24: warning: 'n' may be used uninitialized in this function [-Wmaybe-uninitialized]
 1961 |               vlist[n++] = iH2;
      |               ~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2031:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2031 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_long_tip4p_long_omp.cpp:2030:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
 2030 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
[ 91%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_cut_soft_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:249:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |             if (drudetype[type[i]] != NOPOL_TYPE &&
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  249 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |               ecoul = qi*qj * table;
      |                       ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  242 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  247 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:255:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  255 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  256 |               offseti[jtype];
      |               ~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:249:50: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |             if (drudetype[type[i]] != NOPOL_TYPE &&
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  249 |                 drudetype[type[j]] != NOPOL_TYPE && j != di_closest){
      |                 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'dcoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:245:25: warning: 'qj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |               ecoul = qi*qj * table;
      |                       ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:250:21: warning: 'factor_e' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |               ecoul += factor_e * dcoul;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:242:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  242 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:247:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  247 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:255:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  255 |             evdwl = r6inv*(lj3i[jtype]*r6inv-lj4i[jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  256 |               offseti[jtype];
      |               ~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:244:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTholeLongOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp: In function 'LAMMPS_NS::PairLJCutTholeLongOMP::compute(int, int) [clone ._omp_fn.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:124:7: note: 'di_closest' was declared here
  124 |   int di_closest;
      |       ^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:123:13: note: 'dqi' was declared here
  123 |   double qj,dqi,dqj,dcoul,asr,exp_asr;
      |             ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:206:13: warning: 'di_closest' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |             if (j != di_closest){
      |             ^~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:124:7: note: 'di_closest' was declared here
  124 |   int di_closest;
      |       ^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:213:30: warning: 'dqi' may be used uninitialized in this function [-Wmaybe-uninitialized]
  213 |               dcoul = qqrd2e * dqi * dqj / r;
      |                       ~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_thole_long_omp.cpp:123:13: note: 'dqi' was declared here
  123 |   double qj,dqi,dqj,dcoul,asr,exp_asr;
      |             ^~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_charmm_coul_long_soft_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:160:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:156:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:160:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  160 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_cut_soft_omp.cpp:156:19: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |             ecoul = factor_coul * qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:182:39: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                                    ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:175:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:182:26: warning: 'denlj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  182 |               (1.0/(denlj*denlj) - 1.0/denlj) - offset[itype][jtype];
      |                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:175:23: warning: 'denc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |             prefactor = qqrd2e * lj1[itype][jtype] * qtmp*q[j] / denc;
      |             ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_coul_long_soft_omp.cpp:176:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  176 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp.o
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[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_diel_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_diel_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_coul_diel_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:391:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:387:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  387 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:332:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:328:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  328 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<0, 0, 0>(int, int, LAMMPS_NS::ThrData*)void [clone .isra.0]':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:420:22: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  420 |             f[jH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:416:22: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  416 |             f[jH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:361:22: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  361 |             f[iH2].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:357:22: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  357 |             f[iH1].x += fHx;
      |             ~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp: In member function 'LAMMPS_NS::PairAGNIOMP::eval<1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp:158:38: warning: 'delz' may be used uninitialized in this function [-Wmaybe-uninitialized]
  158 |     if (EVFLAG) ev_tally_xyz_full_thr(this,i,0.0,0.0,
      |                 ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
  159 |                                       fxtmp,fytmp,fztmp,
      |                                       ~~~~~~~~~~~~~~~~~~
  160 |                                       delx,dely,delz,thr);
      |                                       ~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp:158:38: warning: 'dely' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_agni_omp.cpp:158:38: warning: 'delx' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_edip_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_edip_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_edip_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 0, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairTIP4PLongSoftOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:407:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  407 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:349:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  349 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:348:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  348 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tip4p_long_soft_omp.cpp:408:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  408 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongSoftOMP::eval<1, 0, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:436:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  436 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:378:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  378 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:377:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  377 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_cut_tip4p_long_soft_omp.cpp:437:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  437 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_gauss_cut_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_smooth_linear_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_morse_smooth_linear_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSFOMP::eval<1, 1, 1>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~~
  291 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:290:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~                                          
[ 92%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_table_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_table_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_tersoff_table_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSFOMP::eval<1, 1, 0>(int, int, LAMMPS_NS::ThrData*)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~~
  291 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:290:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:37: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:38: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:283:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  283 |               ecoul += qtmp * r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:281:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  281 |               ecoul += -q[j] * r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:279:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  279 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_lj_sf_dipole_sf_omp.cpp:288:70: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  288 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype])+
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  289 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |               rsq*rcutlj2inv+
      |               ~~~~~~~~~~~~~~                                          
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_reaxc_omp.cpp: In member function 'LAMMPS_NS::PairReaxCOMP::compute(int, int)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/pair_reaxc_omp.cpp:223:31: warning: 't_start' may be used uninitialized in this function [-Wmaybe-uninitialized]
  223 |     data->timing.nbrs = t_end - t_start;
      |                         ~~~~~~^~~~~~~~~
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[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_nonbonded_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_nonbonded_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_nonbonded_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_bonds_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_bonds_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_bonds_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_xv_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:787:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  787 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:782:23: warning: 'lbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  782 |         lbonus[line[i]].theta = theta;
      |         ~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:766:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  766 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_init_md_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_init_md_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_init_md_omp.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_v_thr<1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:964:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  964 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:951:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  951 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_v_thr<0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:964:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  964 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:951:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  951 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp: In member function 'LAMMPS_NS::FixRigidNHOMP::set_v_thr<0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:964:36: warning: 'tbonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  964 |         inertiaatom = tbonus[tri[i]].inertia;
      |                       ~~~~~~~~~~~~~^
/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/fix_rigid_nh_omp.cpp:951:36: warning: 'ebonus' may be used uninitialized in this function [-Wmaybe-uninitialized]
  951 |         shape = ebonus[ellipsoid[i]].shape;
      |                 ~~~~~~~~~~~~~~~~~~~^
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_torsion_angles_omp.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_torsion_angles_omp.cpp
[ 93%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP/reaxc_forces_omp.cpp.o
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/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_long_coul_long_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_long_coul_long_opt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongOpt::eval<1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |                 ecoul = prefactor*erfc;
      |                 ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:23: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:32: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongOpt::eval<1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  206 |                 ecoul = prefactor*erfc;
      |                 ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:206:23: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:23: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                 ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_charmm_coul_long_opt.cpp:208:32: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  208 |                 table = etable[itable] + fraction*detable[itable];
      |                                ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongOpt::eval<1, 1, 0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:175:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  175 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:180:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  180 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:184:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  184 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  185 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_coul_long_opt.cpp:177:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  177 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_opt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_opt.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_alloy_opt.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_alloy_opt.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_alloy_opt.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 1, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<1, 0, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             f[jH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  350 |             f[iH2][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |             f[iH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  409 |             f[jH2][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 1, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 1, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  432 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:432:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:434:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  434 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 0, 1>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 1, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:367:26: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  367 |               vlist[n++] = iH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:366:26: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               vlist[n++] = iH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:426:26: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  426 |               vlist[n++] = jH2;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:425:26: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               vlist[n++] = jH1;
      |               ~~~~~~~~~~~^~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp: In member function 'LAMMPS_NS::PairLJCutTIP4PLongOpt::eval<0, 0, 0, 0>()void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:405:15: warning: 'jH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  405 |             f[jH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:350:15: warning: 'iH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  350 |             f[iH2][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:346:15: warning: 'iH1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |             f[iH1][0] += fHx;
      |               ^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_lj_cut_tip4p_long_opt.cpp:409:15: warning: 'jH2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  409 |             f[jH2][0] += fHx;
      |               ^~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT/pair_eam_fs_opt.cpp.o
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[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_beck_gpu.cpp: In member function 'LAMMPS_NS::PairBeckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_beck_gpu.cpp:253:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  253 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_gpu.cpp: In member function 'LAMMPS_NS::PairBornGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_gpu.cpp:255:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  255 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:294:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  294 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:291:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  291 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:291:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_gpu.cpp:295:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp: In member function 'LAMMPS_NS::PairBuckGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_gpu.cpp:250:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_cut_gpu.cpp
[ 94%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_debye_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp: In member function 'LAMMPS_NS::PairBuckCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp:262:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  262 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_cut_gpu.cpp:262:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  262 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_dpd_gpu.cpp: In member function 'LAMMPS_NS::PairDPDGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_dpd_gpu.cpp:418:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  418 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gauss_gpu.cpp: In member function 'LAMMPS_NS::PairGaussGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gauss_gpu.cpp:243:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  243 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj96_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJ96CutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj96_cut_gpu.cpp:239:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  239 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp: In member function 'LAMMPS_NS::PairLJCubicGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp:247:21: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  247 |               (PHIS + DPHIDS*t - A3*t*t*t/6.0);
      |                ~~~~~^~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp:244:54: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  244 |             evdwl = r6inv * (lj3[itype][jtype]*r6inv - lj4[itype][jtype]);
      |                             ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cubic_gpu.cpp:251:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  251 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_gpu.cpp:249:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  249 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_cut_gpu.cpp:261:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  261 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  262 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDebyeGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:265:19: warning: 'screening' may be used uninitialized in this function [-Wmaybe-uninitialized]
  265 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:265:54: warning: 'rinv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  265 |             ecoul = factor_coul * qqrd2e * qtmp*q[j] * rinv * screening;
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_debye_gpu.cpp:268:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  268 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  269 |             offset[itype][jtype];
      |             ~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulDSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:295:40: warning: 'erfcc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:296:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:282:28: warning: 'forcecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  282 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:289:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  290 |                     offset[itype][jtype];
      |                     ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_dsf_gpu.cpp:295:40: warning: 'r' may be used uninitialized in this function [-Wmaybe-uninitialized]
  295 |             ecoul = prefactor * (erfcc - r*e_shift - rsq*f_shift);
      |                                  ~~~~~~^~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp: In member function 'LAMMPS_NS::PairLJExpandGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_gpu.cpp:252:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  252 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp: In member function 'LAMMPS_NS::PairLJGromacsGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp:248:50: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |             eswitch = t*t*t*(ljsw3[itype][jtype] + ljsw4[itype][jtype]*t);
      |                             ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_gromacs_gpu.cpp:254:40: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  254 |               if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                           ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp: In member function 'LAMMPS_NS::PairMIECutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_mie_cut_gpu.cpp:238:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  238 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp: In member function 'LAMMPS_NS::PairMorseGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_morse_gpu.cpp:234:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  234 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp: In member function 'LAMMPS_NS::PairSoftGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_soft_gpu.cpp:245:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp: In member function 'LAMMPS_NS::PairTableGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:346:49: warning: 'b' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                                           ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:346:22: warning: 'a' may be used uninitialized in this function [-Wmaybe-uninitialized]
  346 |               ((a*a*a-a)*tb->e2[itable] + (b*b*b-b)*tb->e2[itable+1]) *
      |                ~~~~~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:343:19: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  343 |             evdwl = tb->e[itable] + fraction*tb->de[itable];
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_table_gpu.cpp:351:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp: In member function 'LAMMPS_NS::PairUFMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_ufm_gpu.cpp:248:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp: In member function 'LAMMPS_NS::PairYukawaGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_gpu.cpp:237:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  237 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp
[ 95%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp: In member function 'LAMMPS_NS::PairZBLGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp:245:40: warning: 't' may be used uninitialized in this function [-Wmaybe-uninitialized]
  245 |                     (sw3[itype][jtype] + sw4[itype][jtype]*t);
      |                     ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_zbl_gpu.cpp:250:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  250 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp: In member function 'LAMMPS_NS::PairGayBerneGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_gayberne_gpu.cpp:350:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  350 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],fforce[2],
      |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  351 |                                       -r12[0],-r12[1],-r12[2]);
      |                                       ~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp: In member function 'LAMMPS_NS::PairRESquaredGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_resquared_gpu.cpp:325:38: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  325 |         if (evflag) ev_tally_xyz_full(i,evdwl,0.0,fforce[0],fforce[1],
      |                     ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  326 |                                       fforce[2],-r12[0],-r12[1],-r12[2]);
      |                                       ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp: In member function 'LAMMPS_NS::PairLJClass2GPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_gpu.cpp:236:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  236 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJClass2CoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:289:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  289 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:290:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  290 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:293:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  294 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_class2_coul_long_gpu.cpp:293:51: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |             evdwl = r6inv*(lj3[itype][jtype]*r3inv-lj4[itype][jtype]) -
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp: In member function 'LAMMPS_NS::PairColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp:315:15: warning: 'fpair' may be used uninitialized in this function [-Wmaybe-uninitialized]
  315 |       f[i][2] += delz*fpair;
      |       ~~~~~~~~^~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_colloid_gpu.cpp:311:24: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  311 |       if (eflag) evdwl *= factor_lj;
      |                  ~~~~~~^~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleCutGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:366:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  366 |               ecoul += qtmp*r3inv*pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:364:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  364 |               ecoul += -q[j]*r3inv*pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:362:36: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:362:41: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                                      ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:362:36: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  362 |               ecoul += r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr;
      |                        ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_cut_gpu.cpp:371:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  371 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  372 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp: In member function 'LAMMPS_NS::PairYukawaColloidGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_yukawa_colloid_gpu.cpp:248:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
  248 |         if (evflag) ev_tally_full(i,evdwl,0.0,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutDipoleLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:66: warning: 'd2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                   ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:62: warning: 'd1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:58: warning: 'd0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                    ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:43: warning: 'b2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:39: warning: 'b1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                                     ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:35: warning: 'b0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:43: warning: 'g2' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                            ~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:425:62: warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized]
  425 |               ecoul += (1-factor_coul) * qqrd2e * (d0*g0 + d1*g1 + d2*g2);
      |                                                            ~~^~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:422:35: warning: 'g0' may be used uninitialized in this function [-Wmaybe-uninitialized]
  422 |             ecoul = qqrd2e*(b0*g0 + b1*g1 + b2*g2);
      |                             ~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_dipole_long_gpu.cpp:430:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  430 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  431 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:299:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  299 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:300:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  300 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:304:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  304 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_gpu.cpp:303:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  303 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairBuckCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:291:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  291 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:292:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  292 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:296:59: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                                            ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_buck_coul_long_gpu.cpp:296:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv -
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:294:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  294 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:294:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:296:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_gpu.cpp:296:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_tip4p_long_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_tip4p_long_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_tip4p_long_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJCharmmCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:330:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  330 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:335:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  335 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:339:51: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  339 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                           ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:332:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:332:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  332 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_charmm_coul_long_gpu.cpp:339:39: warning: 'jtype' may be used uninitialized in this function [-Wmaybe-uninitialized]
  339 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]);
      |                                       ^~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:318:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  318 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:323:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  323 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:327:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  327 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  328 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:320:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  320 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_long_gpu.cpp:320:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  320 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp: In member function 'LAMMPS_NS::PairLJCutCoulMSMGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:296:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  296 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:291:21: warning: 'egamma' may be used uninitialized in this function [-Wmaybe-uninitialized]
  291 |               ecoul = prefactor*egamma;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:300:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  300 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  301 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:306:34: warning: 'ecoul' may be used uninitialized in this function [-Wmaybe-uninitialized]
  306 |         if (evflag) ev_tally_full(i,evdwl,ecoul,fpair,delx,dely,delz);
      |                     ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:306:34: warning: 'evdwl' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_cut_coul_msm_gpu.cpp:293:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp
[ 96%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_sw_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_sw_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_sw_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMAlloyGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_alloy_gpu.cpp:391:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  391 |       if (values.count() != file->nelements + 1)
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp: In member function 'virtual void LAMMPS_NS::PairEAMFSGPU::read_file(char*)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_eam_fs_gpu.cpp:391:26: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  391 |       if (values.count() != file->nelements + 1)
      |           ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
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[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp.o
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/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute<1, 1>(int, int, int*, int*, int**)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:351:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute<1, 0>(int, int, int*, int*, int**)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:351:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJSDKCoulLongGPU::cpu_compute<0, 0>(int, int, int*, int*, int**)void':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sdk_coul_long_gpu.cpp:351:28: warning: 'forcelj' may be used uninitialized in this function [-Wmaybe-uninitialized]
  351 |         fpair = (forcecoul + factor_lj*forcelj) * r2inv;
      |                 ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp: In member function 'LAMMPS_NS::PairLJExpandCoulLongGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:324:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  324 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:329:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  329 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:333:19: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  333 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) -
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  334 |               offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:326:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  326 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_expand_coul_long_gpu.cpp:326:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  326 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
[ 97%] Building CXX object CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp.o
/usr/bin/g++ -DFFT_FFTW3 -DFFT_FFTW_THREADS -DLAMMPS_EXCEPTIONS -DLAMMPS_GZIP -DLAMMPS_JPEG -DLAMMPS_MEMALIGN=64 -DLAMMPS_OMP_COMPAT=4 -DLAMMPS_PNG -DLAMMPS_SMALLBIG -DLMP_MPIIO -DLMP_PYTHON -DLMP_USER_OMP -Dlammps_EXPORTS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/message/cslib/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/ASPHERE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/BODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CLASS2 -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/COLLOID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/DIPOLE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GRANULAR -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KSPACE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MANYBODY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MESSAGE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MLIAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MOLECULE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PERI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/POEMS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/QEQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/REPLICA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/RIGID -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SHOCK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SPIN -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SNAP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/SRD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/KIM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/PYTHON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/VORONOI -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-ATC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-BOCS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGDNA -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MESODPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-CGSDK -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-COLVARS -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DIFFRACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-DRUDE -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-EFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-FEP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-H5MD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MANIFOLD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MEAMC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MGPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MISC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-MOFFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PHONON -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-PTM -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-QTB -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REACTION -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-REAXC -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SDPD -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SMTBQ -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-SPH -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-TALLY -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-UEF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-YAFF -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/CORESHELL -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/USER-OMP -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/OPT -I/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/styles -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/colvars/lepton/include -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/poems -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/atc -I/builddir/build/BUILD/lammps-patch_29Oct2020/lib/h5md/include -isystem /usr/include/openmpi-riscv64 -isystem /usr/include/python3.9 -isystem /usr/include/kim-api -isystem /usr/lib64/kim-api/mod -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIC -pthread -fopenmp -std=c++11 -o CMakeFiles/lammps.dir/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp: In member function 'LAMMPS_NS::PairLJSFDipoleSFGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:398:19: warning: 'rcutlj6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
      |             ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  399 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  400 |               rsq*rcutlj2inv +
      |               ~~~~~~~~~~~~~~~~
  401 |               rcutlj6inv*(-7*lj3[itype][jtype]*rcutlj6inv+4*lj4[itype][jtype]);
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:400:18: warning: 'rcutlj2inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  399 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  400 |               rsq*rcutlj2inv +
      |               ~~~^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:393:35: warning: 'qpfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
      |                        ~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:391:36: warning: 'pqfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
      |                        ~~~~~~~~~~~~^~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:21: warning: 'bfac' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:393:21: warning: 'pjdotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  393 |               ecoul += qtmp*r3inv * qpfac * pjdotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:391:21: warning: 'pidotr' may be used uninitialized in this function [-Wmaybe-uninitialized]
  391 |               ecoul += -q[j]*r3inv * pqfac * pidotr;
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:44: warning: 'pdotp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:49: warning: 'r5inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                                              ~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:389:44: warning: 'r3inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  389 |               ecoul += bfac * (r3inv*pdotp - 3.0*r5inv*pidotr*pjdotr);
      |                               ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_lj_sf_dipole_sf_gpu.cpp:398:71: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  398 |             evdwl = r6inv*(lj3[itype][jtype]*r6inv-lj4[itype][jtype]) +
      |                     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^
  399 |               rcutlj6inv*(6*lj3[itype][jtype]*rcutlj6inv-3*lj4[itype][jtype])*
      |               ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  400 |               rsq*rcutlj2inv +
      |               ~~~~~~~~~~~~~~                                           
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulWolfCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:297:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  297 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv +
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:294:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  294 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:294:42: warning: 'v_sh' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_wolf_cs_gpu.cpp:298:30: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  298 |               d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |               ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp: In member function 'LAMMPS_NS::PairBornCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:338:19: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  338 |             ecoul = prefactor*erfc;
      |             ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:339:42: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
  339 |             if (factor_coul < 1.0) ecoul -= (1.0-factor_coul)*prefactor;
      |                                    ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:343:32: warning: 'r6inv' may be used uninitialized in this function [-Wmaybe-uninitialized]
  343 |               + d[itype][jtype]*r6inv*r2inv - offset[itype][jtype];
      |                 ~~~~~~~~~~~~~~~^~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_born_coul_long_cs_gpu.cpp:342:42: warning: 'rexp' may be used uninitialized in this function [-Wmaybe-uninitialized]
  342 |             evdwl = a[itype][jtype]*rexp - c[itype][jtype]*r6inv
      |                     ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp: In member function 'LAMMPS_NS::PairCoulLongCSGPU::cpu_compute(int, int, int, int, int*, int*, int**)':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:319:21: warning: 'erfc' may be used uninitialized in this function [-Wmaybe-uninitialized]
  319 |               ecoul = prefactor*erfc;
      |               ~~~~~~^~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:319:21: warning: 'prefactor' may be used uninitialized in this function [-Wmaybe-uninitialized]
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:321:21: warning: 'fraction' may be used uninitialized in this function [-Wmaybe-uninitialized]
  321 |               table = etable[itable] + fraction*detable[itable];
      |               ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/src/GPU/pair_coul_long_cs_gpu.cpp:321:30: warning: 'itable' may be used uninitialized in this function [-Wmaybe-uninitialized]
  321 |               table = etable[itable] + fraction*detable[itable];
      |                              ^~~~~~
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/usr/bin/cmake -E cmake_link_script CMakeFiles/lammps.dir/link.txt --verbose=1
/usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -shared -Wl,-soname,liblammps_openmpi.so.0 -o liblammps_openmpi.so.0 @CMakeFiles/lammps.dir/objects1.rsp  -Wl,-rpath,/usr/lib64/openmpi/lib: /usr/lib64/libjpeg.so /usr/lib64/libpng.so /usr/lib64/libz.so /usr/lib64/libfftw3.so /usr/lib64/libfftw3_omp.so /usr/lib64/libpython3.9.so /usr/lib64/libvoro++.so liblammps_colvars_openmpi.a liblammps_lepton_openmpi.a libcsmpi.a -lm liblammps_poems_openmpi.a liblammps_atc_openmpi.a liblammps_h5md_openmpi.a liblammps_gpu_openmpi.a /usr/lib/gcc/riscv64-redhat-linux/10/libgomp.so /lib64/lp64d/libpthread.so /usr/lib/gcc/riscv64-redhat-linux/10/libatomic.so /usr/lib64/libkim-api.so -lflexiblas /usr/lib64/libhdf5.so /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so /usr/lib64/libOpenCL.so 
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp: In member function 'init_pkg_lists':
/builddir/build/BUILD/lammps-patch_29Oct2020/src/lammps.cpp:908:13: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without
  908 | void _noopt LAMMPS::init_pkg_lists()
      |             ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:384:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 8 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:387:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 8 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:390:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 4 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_atom_mpiio.cpp:393:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 4 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:430:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 8 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:433:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 8 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:436:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 4 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
In function 'memcpy',
    inlined from 'header_binary_triclinic' at /builddir/build/BUILD/lammps-patch_29Oct2020/src/MPIIO/dump_custom_mpiio.cpp:439:11:
/usr/include/bits/string_fortified.h:29:33: warning: '__builtin_memcpy' writing 4 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=]
   29 |   return __builtin___memcpy_chk (__dest, __src, __len, __bos0 (__dest));
      |                                 ^
/usr/bin/cmake -E cmake_symlink_library liblammps_openmpi.so.0 liblammps_openmpi.so.0 liblammps_openmpi.so
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/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_mempool.dir/test_mempool.cpp.o -o test_mempool  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock_main.a ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
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/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_utils.dir/test_utils.cpp.o -o test_utils  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock_main.a ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_eim_potential_file_reader.dir/test_eim_potential_file_reader.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_eim_potential_file_reader.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_atom.cpp: In member function 'std::string DumpAtomTest::convert_binary_to_text(std::string)':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_atom.cpp:66:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   66 |         system(cmdline.c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~
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/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_potential_file_reader.dir/test_potential_file_reader.cpp.o -o test_potential_file_reader  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
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/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_eim_potential_file_reader.dir/test_eim_potential_file_reader.cpp.o -o test_eim_potential_file_reader  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
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/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_dump_atom.dir/test_dump_atom.cpp.o -o test_dump_atom  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
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Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_file_operations.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_file_operations.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_file_operations.dir/depend.internal".
Scanning dependencies of target test_file_operations
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_file_operations.dir/build.make unittest/formats/CMakeFiles/test_file_operations.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_file_operations.dir/test_file_operations.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_file_operations.dir/test_file_operations.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_file_operations.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 98%] Built target test_eim_potential_file_reader
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_cfg.dir/build.make unittest/formats/CMakeFiles/test_dump_cfg.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_dump_cfg.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_dump_cfg.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_dump_cfg.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_dump_cfg.dir/depend.internal".
Scanning dependencies of target test_dump_cfg
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_cfg.dir/build.make unittest/formats/CMakeFiles/test_dump_cfg.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_dump_cfg.dir/test_dump_cfg.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_dump_cfg.dir/test_dump_cfg.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_cfg.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 98%] Built target test_pair_unit_convert
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_atom_styles.dir/build.make unittest/formats/CMakeFiles/test_atom_styles.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_atom_styles.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_atom_styles.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_atom_styles.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_atom_styles.dir/depend.internal".
Scanning dependencies of target test_atom_styles
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_atom_styles.dir/build.make unittest/formats/CMakeFiles/test_atom_styles.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_atom_styles.dir/test_atom_styles.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_atom_styles.dir/test_atom_styles.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_atom_styles.cpp
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_file_operations.cpp: In member function 'virtual void FileOperationsTest_logmesg_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_file_operations.cpp:168:10: warning: ignoring return value of 'size_t fread(void*, size_t, size_t, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result]
  168 |     fread(buf, 1, 8, fp);
      |     ~~~~~^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_cfg.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h:40:13: warning: 'bool equal_lines(const string&, const string&)' defined but not used [-Wunused-function]
   40 | static bool equal_lines(const std::string &fileA, const std::string &fileB)
      |             ^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h:28:15: warning: 'size_t count_lines(const string&)' defined but not used [-Wunused-function]
   28 | static size_t count_lines(const std::string &filename)
      |               ^~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_atom_styles.cpp: In member function 'virtual void LAMMPS_NS::AtomStyleTest_atomic_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_atom_styles.cpp:394:10: warning: variable 'tag' set but not used [-Wunused-but-set-variable]
  394 |     auto tag = lmp->atom->tag;
      |          ^~~
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 98%] Built target test_dump_atom
/usr/bin/gmake  -f unittest/formats/CMakeFiles/test_dump_custom.dir/build.make unittest/formats/CMakeFiles/test_dump_custom.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_dump_custom.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_dump_custom.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_dump_custom.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/CMakeFiles/test_dump_custom.dir/depend.internal".
Scanning dependencies of target test_dump_custom
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 98%] Building CXX object unittest/formats/CMakeFiles/test_dump_custom.dir/test_dump_custom.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_dump_custom.dir/test_dump_custom.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp
[ 99%] Linking CXX executable test_file_operations
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_file_operations.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_file_operations.dir/test_file_operations.cpp.o -o test_file_operations  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
[ 99%] Linking CXX executable test_dump_cfg
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dump_cfg.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_dump_cfg.dir/test_dump_cfg.cpp.o -o test_dump_cfg  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp: In member function 'std::string DumpCustomTest::convert_binary_to_text(std::string)':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp:65:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result]
   65 |         system(cmdline.c_str());
      |         ~~~~~~^~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/test_dump_custom.cpp:20:
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h: At global scope:
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/formats/../testing/utils.h:28:15: warning: 'size_t count_lines(const string&)' defined but not used [-Wunused-function]
   28 | static size_t count_lines(const std::string &filename)
      |               ^~~~~~~~~~~
[ 99%] Linking CXX executable test_dump_custom
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_dump_custom.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_dump_custom.dir/test_dump_custom.cpp.o -o test_dump_custom  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 99%] Built target test_file_operations
/usr/bin/gmake  -f unittest/commands/CMakeFiles/test_reset_ids.dir/build.make unittest/commands/CMakeFiles/test_reset_ids.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_reset_ids.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_reset_ids.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_reset_ids.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_reset_ids.dir/depend.internal".
Scanning dependencies of target test_reset_ids
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f unittest/commands/CMakeFiles/test_reset_ids.dir/build.make unittest/commands/CMakeFiles/test_reset_ids.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 99%] Building CXX object unittest/commands/CMakeFiles/test_reset_ids.dir/test_reset_ids.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_reset_ids.dir/test_reset_ids.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 99%] Built target test_dump_cfg
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp: In member function 'virtual void LAMMPS_NS::ResetIDsTest_TopologyData_Test::TestBody()':
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp:485:10: warning: variable 'num_dihedral' set but not used [-Wunused-but-set-variable]
  485 |     auto num_dihedral   = lmp->atom->num_dihedral;
      |          ^~~~~~~~~~~~
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_reset_ids.cpp:486:10: warning: variable 'num_improper' set but not used [-Wunused-but-set-variable]
  486 |     auto num_improper   = lmp->atom->num_improper;
      |          ^~~~~~~~~~~~
/usr/bin/gmake  -f unittest/commands/CMakeFiles/test_kim_commands.dir/build.make unittest/commands/CMakeFiles/test_kim_commands.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_kim_commands.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_kim_commands.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_kim_commands.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_kim_commands.dir/depend.internal".
Scanning dependencies of target test_kim_commands
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_kim_commands.dir/test_kim_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_kim_commands.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_lattice_region.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_lattice_region.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_lattice_region.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_lattice_region.dir/depend.internal".
Scanning dependencies of target test_lattice_region
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[ 99%] Building CXX object unittest/commands/CMakeFiles/test_lattice_region.dir/test_lattice_region.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_lattice_region.dir/test_lattice_region.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_lattice_region.cpp
[ 99%] Linking CXX executable test_kim_commands
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_kim_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_kim_commands.dir/test_kim_commands.cpp.o -o test_kim_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_reset_ids.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_reset_ids.dir/test_reset_ids.cpp.o -o test_reset_ids  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
[ 99%] Linking CXX executable test_lattice_region
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_lattice_region.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_lattice_region.dir/test_lattice_region.cpp.o -o test_lattice_region  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_simple_commands.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_simple_commands.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_simple_commands.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/CMakeFiles/test_simple_commands.dir/depend.internal".
Scanning dependencies of target test_simple_commands
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_simple_commands.dir/test_simple_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/commands/test_simple_commands.cpp
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_simple_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_simple_commands.dir/test_simple_commands.cpp.o -o test_simple_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/test_library_config.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/test_library_config.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/test_library_config.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/test_library_config.dir/depend.internal".
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_HAS_EXCEPTIONS=1 -DLAMMPS_HAS_FFMPEG=0 -DLAMMPS_HAS_GZIP=1 -DLAMMPS_HAS_JPEG=1 -DLAMMPS_HAS_MANYBODY=1 -DLAMMPS_HAS_MPI=1 -DLAMMPS_HAS_PNG=1 -DLAMMPS_SMALLBIG -DNUM_LAMMPS_PACKAGES=58 -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_library_config.dir/test_library_config.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_config.cpp
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[ 99%] Building CXX object unittest/c-library/CMakeFiles/test_library_config.dir/test_main.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_HAS_EXCEPTIONS=1 -DLAMMPS_HAS_FFMPEG=0 -DLAMMPS_HAS_GZIP=1 -DLAMMPS_HAS_JPEG=1 -DLAMMPS_HAS_MANYBODY=1 -DLAMMPS_HAS_MPI=1 -DLAMMPS_HAS_PNG=1 -DLAMMPS_SMALLBIG -DNUM_LAMMPS_PACKAGES=58 -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_library_config.dir/test_main.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_main.cpp
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_library_config.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_library_config.dir/test_library_config.cpp.o CMakeFiles/test_library_config.dir/test_main.cpp.o -o test_library_config  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/test_library_properties.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/test_library_properties.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/test_library_properties.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/CMakeFiles/test_library_properties.dir/depend.internal".
Scanning dependencies of target test_library_properties
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
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cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_library_properties.dir/test_library_properties.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_properties.cpp
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/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/c-library/test_library_properties.cpp: In member function 'virtual void LibraryProperties_global_Test::TestBody()':
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  265 |     int *i_ptr;
      |          ^~~~~
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/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_library_commands.dir/test_library_commands.cpp.o CMakeFiles/test_library_commands.dir/test_main.cpp.o -o test_library_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
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/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_library_properties.dir/test_library_properties.cpp.o CMakeFiles/test_library_properties.dir/test_main.cpp.o -o test_library_properties  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
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gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[100%] Building Fortran object unittest/fortran/CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran && /usr/bin/f95 -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -I/usr/include/openmpi-riscv64 -I/usr/lib64/openmpi/lib -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIE -pthread -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_commands.f90 -o CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_commands.f90: Warning: -D_FORTIFY_SOURCE not defined
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_commands.f90: Warning: -D_GLIBCXX_ASSERTIONS not defined
[100%] Building CXX object unittest/fortran/CMakeFiles/test_fortran_commands.dir/wrap_commands.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /usr/lib64/openmpi/lib -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_fortran_commands.dir/wrap_commands.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/wrap_commands.cpp
[100%] Linking CXX executable test_lammps_class
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/cplusplus && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_lammps_class.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_lammps_class.dir/test_lammps_class.cpp.o -o test_lammps_class  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock_main.a ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgmock.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/keepcmds.mod unittest/fortran/CMakeFiles/test_fortran_commands.dir/keepcmds.mod.stamp GNU
[100%] Linking CXX executable test_fortran_commands
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fortran_commands.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_fortran_commands.dir/wrap_commands.cpp.o CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o -o test_fortran_commands  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib libflammps.a ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgtest_main.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi_usempif08.so /usr/lib64/openmpi/lib/libmpi_usempi_ignore_tkr.so /usr/lib64/openmpi/lib/libmpi_mpifh.so /usr/lib64/openmpi/lib/libmpi.so -lpthread -lgfortran 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
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/usr/bin/gmake  -f unittest/fortran/CMakeFiles/test_fortran_create.dir/build.make unittest/fortran/CMakeFiles/test_fortran_create.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/test_fortran_create.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/test_fortran_create.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/test_fortran_create.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/CMakeFiles/test_fortran_create.dir/depend.internal".
Scanning dependencies of target test_fortran_create
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f unittest/fortran/CMakeFiles/test_fortran_create.dir/build.make unittest/fortran/CMakeFiles/test_fortran_create.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[100%] Building Fortran object unittest/fortran/CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran && /usr/bin/f95 -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -I/usr/include/openmpi-riscv64 -I/usr/lib64/openmpi/lib -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules -fPIE -pthread -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90 -o CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90: Warning: -D_FORTIFY_SOURCE not defined
annobin: /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90: Warning: -D_GLIBCXX_ASSERTIONS not defined
/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/test_fortran_create.f90:77:0:
   77 | FUNCTION f_lammps_get_comm() BIND(C, name="f_lammps_get_comm")
      | 
Warning: Variable 'f_lammps_get_comm' at (1) may not be a C interoperable kind but it is BIND(C) [-Wc-binding-type]
[100%] Building CXX object unittest/fortran/CMakeFiles/test_fortran_create.dir/wrap_create.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /usr/lib64/openmpi/lib -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_fortran_create.dir/wrap_create.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/fortran/wrap_create.cpp
/usr/bin/cmake -E cmake_copy_f90_mod unittest/fortran/keepcreate.mod unittest/fortran/CMakeFiles/test_fortran_create.dir/keepcreate.mod.stamp GNU
[100%] Linking CXX executable test_fortran_create
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_fortran_create.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_fortran_create.dir/wrap_create.cpp.o CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o -o test_fortran_create  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib libflammps.a ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgtest.a ../../gtest-build/lib/libgtest_main.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi_usempif08.so /usr/lib64/openmpi/lib/libmpi_usempi_ignore_tkr.so /usr/lib64/openmpi/lib/libmpi_mpifh.so /usr/lib64/openmpi/lib/libmpi.so -lpthread -lgfortran 
/usr/bin/cmake -E touch unittest/fortran/CMakeFiles/test_fortran_commands.dir/test_fortran_commands.f90.o.provides.build
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[100%] Built target test_fortran_commands
/usr/bin/gmake  -f unittest/python/CMakeFiles/test_python_package.dir/build.make unittest/python/CMakeFiles/test_python_package.dir/depend
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/lammps-patch_29Oct2020/cmake /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python/CMakeFiles/test_python_package.dir/DependInfo.cmake --color=
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python/CMakeFiles/test_python_package.dir/DependInfo.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python/CMakeFiles/test_python_package.dir/depend.internal".
Dependee "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python/CMakeFiles/test_python_package.dir/depend.internal".
Scanning dependencies of target test_python_package
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/gmake  -f unittest/python/CMakeFiles/test_python_package.dir/build.make unittest/python/CMakeFiles/test_python_package.dir/build
gmake[2]: Entering directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[100%] Building CXX object unittest/python/CMakeFiles/test_python_package.dir/test_python_package.cpp.o
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python && /usr/bin/g++ -DLAMMPS_EXCEPTIONS -DLAMMPS_SMALLBIG -DTEST_INPUT_FOLDER=/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python -I/builddir/build/BUILD/lammps-patch_29Oct2020/src -I/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/includes -isystem /usr/include/openmpi-riscv64 -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googlemock/include -isystem /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -fPIE -pthread -std=c++11 -o CMakeFiles/test_python_package.dir/test_python_package.cpp.o -c /builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/test_python_package.cpp
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[100%] Built target test_lammps_class
/usr/bin/cmake -E touch unittest/fortran/CMakeFiles/test_fortran_create.dir/test_fortran_create.f90.o.provides.build
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[100%] Built target test_fortran_create
[100%] Linking CXX executable test_python_package
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_python_package.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_python_package.dir/test_python_package.cpp.o -o test_python_package  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[100%] Built target test_python_package
[100%] Linking CXX executable test_atom_styles
cd /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_atom_styles.dir/link.txt --verbose=1
/usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -fasynchronous-unwind-tables -fstack-clash-protection -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld  -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -Wl,-rpath -Wl,/usr/lib64/openmpi/lib -Wl,--enable-new-dtags -pthread CMakeFiles/test_atom_styles.dir/test_atom_styles.cpp.o -o test_atom_styles  -Wl,-rpath,/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib ../../liblammps_openmpi.so.0 ../../gtest-build/lib/libgmock.a ../../gtest-build/lib/libgtest.a /usr/lib64/openmpi/lib/libmpi_cxx.so /usr/lib64/openmpi/lib/libmpi.so -lpthread 
gmake[2]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
[100%] Built target test_atom_styles
gmake[1]: Leaving directory '/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeFiles 0
+ test -n openmpi
+ module unload mpi/openmpi-riscv64
++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-riscv64
+ eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH
++ unset LD_LIBRARY_PATH
++ unset __LMOD_REF_COUNT_LOADEDMODULES
++ unset LOADEDMODULES
++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1
++ export __LMOD_REF_COUNT_MANPATH
++ MANPATH=/usr/share/lmod/lmod/share/man
++ export MANPATH
++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
++ export MODULEPATH
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
++ export __LMOD_REF_COUNT_PATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset __LMOD_REF_COUNT__LMFILES_
++ unset _LMFILES_
++ _ModuleTable001_=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
++ export _ModuleTable001_
++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=
++ export _ModuleTable002_
++ _ModuleTable_Sz_=2
++ export _ModuleTable_Sz_
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.4QMdjY
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64
++ dirname /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64
+ cd lammps-patch_29Oct2020
+ . /etc/profile.d/modules.sh
++ . /etc/profile.d/00-modulepath.sh
+++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']'
+++ :
++ '[' -z '' ']'
++ '[' -z /usr/share/modulefiles ']'
++ findExec PS_CMD /usr/bin/ps ps
++ Nm=PS_CMD
++ confPath=/usr/bin/ps
++ execNm=ps
++ eval PS_CMD=/usr/bin/ps
+++ PS_CMD=/usr/bin/ps
++ '[' '!' -x /usr/bin/ps ']'
++ unset Nm confPath execNm
++ findExec EXPR_CMD /usr/bin/expr expr
++ Nm=EXPR_CMD
++ confPath=/usr/bin/expr
++ execNm=expr
++ eval EXPR_CMD=/usr/bin/expr
+++ EXPR_CMD=/usr/bin/expr
++ '[' '!' -x /usr/bin/expr ']'
++ unset Nm confPath execNm
++ findExec BASENAME_CMD /usr/bin/basename basename
++ Nm=BASENAME_CMD
++ confPath=/usr/bin/basename
++ execNm=basename
++ eval BASENAME_CMD=/usr/bin/basename
+++ BASENAME_CMD=/usr/bin/basename
++ '[' '!' -x /usr/bin/basename ']'
++ unset Nm confPath execNm
++ unset -f findExec
+++ /usr/bin/ps -p 60649 -ocomm=
++ my_shell=sh
+++ /usr/bin/expr sh : '-*\(.*\)'
++ my_shell=sh
+++ /usr/bin/basename sh
++ my_shell=sh
++ '[' -f /usr/share/lmod/lmod/init/sh ']'
++ . /usr/share/lmod/lmod/init/sh
+++ LMOD_ROOT=/usr/share/lmod
+++ LMOD_PKG=/usr/share/lmod/lmod
+++ LMOD_DIR=/usr/share/lmod/lmod/libexec/
+++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
+++ MODULESHOME=/usr/share/lmod/lmod
+++ export LMOD_CMD
+++ export LMOD_PKG
+++ export LMOD_DIR
+++ export MODULESHOME
+++ export LMOD_DIR
++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT
+ for mpi in '' mpich openmpi
+ DESTDIR=/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64
+ /usr/bin/cmake --install serial
-- Install configuration: ""
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/bin/lmp
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/bin/lmp" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/angle.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/atom.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/bond.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/citeme.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/comm.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/compute.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/dihedral.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/domain.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/error.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/fix.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/force.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/group.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/improper.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/input.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/info.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/kspace.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lammps.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lattice.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/library.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lmppython.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lmptype.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/memory.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/modify.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/neighbor.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/neigh_list.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/output.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/pair.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/pointers.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/region.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/timer.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/universe.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/update.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/utils.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/variable.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/exceptions.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/liblammps.so.0
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/liblammps.so
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/pkgconfig/liblammps.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/cmake/LAMMPS/LAMMPS_Targets.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/cmake/LAMMPS/LAMMPS_Targets-noconfig.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/cmake/LAMMPS/LAMMPSConfig.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/cmake/LAMMPS/LAMMPSConfigVersion.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/man/man1/lmp.1
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/bin/binary2txt
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/bin/chain.x
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/bin/msi2lmp
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/man/man1/msi2lmp.1
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/bin/lammps-shell
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/bin/lammps-shell" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/lmpfile.ico
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/16x16
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/16x16/apps
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/16x16/apps/lammps.png
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/64x64
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/64x64/apps
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/64x64/apps/lammps.png
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/22x22
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/22x22/apps
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/22x22/apps/lammps.png
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/48x48
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/48x48/apps
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/48x48/apps/lammps.png
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/32x32
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/32x32/apps
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/32x32/apps/lammps.png
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/128x128
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/128x128/apps
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/hicolor/128x128/apps/lammps.png
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share//icons/lammps.ico
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/applications/lammps-shell.desktop
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.mliap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.quadratic.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_2940_2017_2.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTeZnSeHgS0.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.1990.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.Fe_O_C_H
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.quadratic.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W.quadratic.mliap.descriptor
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CC.KC
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH.KC
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.edip
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.edip
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Fe_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.mattsson
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTe.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/README.reax
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Zr_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.comb3
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_jnp.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.quadratic.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Pt_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta6.8x.mgpt.parmin
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_prb.agni
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CC.KC-full
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.AB
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.smtbq.TiO2
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/charmm36.cmap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W.quadratic.mliap.model
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WL.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/He_He_JW2013.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.FC
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.gw.zbl
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ti.meam.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.mliap.descriptor
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.quadratic.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.quadratic.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/lib.comb3
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta4.mgpt.parmin
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta4.mgpt.potin
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.quadratic.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.quadratic.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.smtbq.Al
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.ZnOH
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.V_O_C_H
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.quadratic.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdZnTe_v2.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.mliap.model
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/FeCH_BOP_II.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN_tersoff.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTeSe.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/TiO.meam.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_jpc.agni
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.quadratic.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/library.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdZnTe_v1.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ti.meam.sw.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/FeCr.cdeam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta6.8x.mgpt.potin
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.quadratic.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W.quadratic.mliap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.mliap.model
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/charmm22.cmap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BNC.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.smtbq.Al2O3
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlFe_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CC.Lebedeva
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/V6.1.mgpt.README
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.mliap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH.rebo
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN_sw.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_2.meam.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.1994.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTe.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.ci-reax.CH
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CuTa_eam.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CuNi.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta4.mgpt.README
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/NiAlH_jea.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BN.extep
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.quadratic.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.b.meam.sw.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/C.lcbop
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.mliap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni.adp
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.lg
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.quadratic.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC_1989.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.mliap.descriptor
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/TABTP_10_10.mesont
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo5.2.mgpt.README
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC_1990.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/MOH.nb3b.harmonic
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/V6.1.mgpt.parmin
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CoAl.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.tersoff.mod
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_zhou.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.tersoff.modc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/NiAlH_jea.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC_Erhart-Albe.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BNCH.ILP
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.quadratic.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_mishin1.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.budzien
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_smf7.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CuH.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo5.2.mgpt.parmin
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.tersoff.zbl
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ci-reaxFF_ZBL.dat
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/TlBr_msw.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/README
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.1997.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/FeP_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/VFe_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Au_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.comb
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.rdx
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlO.streitz
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mg_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlCuH.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_2940_2017_2_He_JW2013.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/FeCH_BOP_I.poly
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/C.drip
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiCGe.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC_1994.tersoff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlCu.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_He_JW2013.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH.airebo
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CuTa.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta6.8x.mgpt.README
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.quadratic.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_zhou.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BNC_MBD_bulk.ILP
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlO.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo5.2.mgpt.potin
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.quadratic.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.mliap.descriptor
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH_taper.KC
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.gw
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaAs.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_u6.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CuZr_mm.eam.fs
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ag_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.eim
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CCu_v2.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_2940_2017_2.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BNCH-old.ILP
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.cho
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.mliap.model
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.quadratic.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlSiMgCuFe.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN.sw
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_1.meam.spline
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.snapparam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.AuO
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlCu.adp
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.quadratic.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_2940_2017_2.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/V6.1.mgpt.potin
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BNC_TS_bulk.ILP
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_zhou.eam.alloy
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_smf7.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.quadratic.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.snapcoeff
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.snap
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH.airebo-m
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni.meam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP.vashishta
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlCu.bop.table
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Pd_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/cvff_aug.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/cvff.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/pcff_templates.dat
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/clayff.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/oplsaa.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/compass_published.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/README
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/pcff.rlb
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/cff91.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/frc_files/pcff.frc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/etc/profile.d/lammps.sh
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/etc/profile.d/lammps.csh
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib/python3.9/site-packages/lammps.py
+ for mpi in '' mpich openmpi
+ DESTDIR=/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64
+ /usr/bin/cmake --install mpich
-- Install configuration: ""
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/bin/lmp_mpich
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/bin/lmp_mpich" to ""
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/angle.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/atom.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/bond.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/citeme.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/comm.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/compute.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/dihedral.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/domain.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/error.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/fix.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/force.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/group.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/improper.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/input.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/info.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/kspace.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lammps.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lattice.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/library.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lmppython.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lmptype.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/memory.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/modify.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/neighbor.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/neigh_list.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/output.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/pair.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/pointers.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/region.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/timer.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/universe.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/update.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/utils.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/variable.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/exceptions.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/liblammps_mpich.so.0
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/liblammps_mpich.so.0" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/liblammps_mpich.so
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/pkgconfig/liblammps_mpich.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/cmake/LAMMPS/LAMMPS_Targets.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/cmake/LAMMPS/LAMMPS_Targets-noconfig.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/cmake/LAMMPS/LAMMPSConfig.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/cmake/LAMMPS/LAMMPSConfigVersion.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/man/mpich-riscv64/man1/lmp_mpich.1
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.mliap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.quadratic.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_2940_2017_2.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTeZnSeHgS0.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.1990.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.Fe_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W.quadratic.mliap.descriptor
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CC.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Fe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.mattsson
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTe.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/README.reax
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Zr_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_jnp.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Pt_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta6.8x.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_prb.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CC.KC-full
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.AB
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.smtbq.TiO2
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/charmm36.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W.quadratic.mliap.model
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WL.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/He_He_JW2013.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.FC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.gw.zbl
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ti.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.mliap.descriptor
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.quadratic.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.quadratic.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/lib.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta4.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta4.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.quadratic.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.smtbq.Al
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.ZnOH
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.V_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.quadratic.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdZnTe_v2.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.mliap.model
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/FeCH_BOP_II.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN_tersoff.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTeSe.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/TiO.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_jpc.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/library.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdZnTe_v1.bop.table
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W.quadratic.mliap
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_2.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.1994.vashishta
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.snapparam
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/NiAlH_jea.eam.alloy
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.quadratic.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.b.meam.sw.spline
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni.adp
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.lg
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.quadratic.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.snapcoeff
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.mliap.descriptor
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/MOH.nb3b.harmonic
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/V6.1.mgpt.parmin
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_zhou.eam.alloy
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.tersoff
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CuH.bop.table
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ci-reaxFF_ZBL.dat
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.1997.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.snap
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.snapparam
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlO.streitz
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mg_mm.eam.fs
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/FeCH_BOP_I.poly
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-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlCu.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_He_JW2013.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH.airebo
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CuTa.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta6.8x.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.quadratic.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BNC_MBD_bulk.ILP
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlO.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo5.2.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.quadratic.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.mliap.descriptor
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH_taper.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.gw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaAs.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_u6.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CuZr_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ag_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.eim
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CCu_v2.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_2940_2017_2.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BNCH-old.ILP
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.cho
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.mliap.model
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.quadratic.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlSiMgCuFe.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_1.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.AuO
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlCu.adp
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.quadratic.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_2940_2017_2.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/V6.1.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BNC_TS_bulk.ILP
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_zhou.eam.alloy
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_smf7.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH.airebo-m
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlCu.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Pd_u3.eam
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/etc/profile.d/lammps.sh
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/etc/profile.d/lammps.csh
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib/python3.9/site-packages/lammps.py
+ for mpi in '' mpich openmpi
+ DESTDIR=/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64
+ /usr/bin/cmake --install openmpi
-- Install configuration: ""
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/bin/lmp_openmpi
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/bin/lmp_openmpi" to ""
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/angle.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/atom.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/bond.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/citeme.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/comm.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/compute.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/dihedral.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/domain.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/error.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/fix.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/force.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/group.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/improper.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/input.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/info.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/kspace.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lammps.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lattice.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/library.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lmppython.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/lmptype.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/memory.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/modify.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/neighbor.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/neigh_list.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/output.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/pair.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/pointers.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/region.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/timer.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/universe.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/update.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/utils.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/variable.h
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/include/lammps/exceptions.h
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/liblammps_openmpi.so.0
-- Set runtime path of "/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/liblammps_openmpi.so.0" to ""
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/liblammps_openmpi.so
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/pkgconfig/liblammps_openmpi.pc
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/cmake/LAMMPS/LAMMPS_Targets.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/cmake/LAMMPS/LAMMPS_Targets-noconfig.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/cmake/LAMMPS/LAMMPSConfig.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/cmake/LAMMPS/LAMMPSConfigVersion.cmake
-- Installing: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/man/openmpi-riscv64/man1/lmp_openmpi.1
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.mliap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.quadratic.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W_2940_2017_2.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTeZnSeHgS0.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.1990.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.Fe_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W.quadratic.mliap.descriptor
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CC.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH.KC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si.edip
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Fe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.mattsson
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTe.sw
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/README.reax
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Zr_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_jnp.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Pt_u3.eam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta6.8x.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_prb.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CC.KC-full
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.AB
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.smtbq.TiO2
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/charmm36.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W.quadratic.mliap.model
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WL.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/He_He_JW2013.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.FC
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.gw.zbl
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ti.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta06A.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.mliap.descriptor
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiC.vashishta
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.quadratic.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.quadratic.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/lib.comb3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta4.mgpt.parmin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta4.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.quadratic.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge_Zuo_JPCA2020.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.smtbq.Al
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.ZnOH
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.reax.V_O_C_H
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Si_Zuo_JPCA2020.quadratic.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdZnTe_v2.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.mliap.model
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/FeCH_BOP_II.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN_tersoff.poly
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdTeSe.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/TiO.meam.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_jpc.agni
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Li_Zuo_JPCA2020.quadratic.snapcoeff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/SiO.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/library.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ge.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CdZnTe_v1.bop.table
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ti.meam.sw.spline
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Al_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/FeCr.cdeam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ta6.8x.mgpt.potin
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Zuo_JPCA2020.quadratic.snapparam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Cu.meam
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/W.quadratic.mliap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/WBe_Wood_PRB2019.mliap.model
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/charmm22.cmap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/BNC.tersoff
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/ffield.smtbq.Al2O3
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/AlFe_mm.eam.fs
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CC.Lebedeva
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Ni_Zuo_JPCA2020.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/Mo_Chen_PRM2017.snap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/V6.1.mgpt.README
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/InP_JCPA2020.mliap
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/CH.rebo
-- Up-to-date: /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/lammps/potentials/GaN_sw.poly
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explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/bin/lmp_mpich
extracting debug info from /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/bin/msi2lmp
extracting debug info from /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/liblammps.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/bin/lmp_mpich
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/liblammps_mpich.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/mpich/lib/liblammps_mpich.so.0
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/bin/lmp_openmpi
extracting debug info from /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/bin/lmp_openmpi
explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/liblammps_openmpi.so.0
extracting debug info from /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib64/openmpi/lib/liblammps_openmpi.so.0
original debug info size: 2073676kB, size after compression: 1812536kB
/usr/lib/rpm/sepdebugcrcfix: Updated 10 CRC32s, 0 CRC32s did match.
75657 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0
Bytecompiling .py files below /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/lib/python3.9 using /usr/bin/python3.9
+ /usr/lib/rpm/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.WNSxI0
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_29Oct2020
+ . /etc/profile.d/modules.sh
++ . /etc/profile.d/00-modulepath.sh
+++ '[' -z /etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core ']'
+++ :
++ '[' -z '' ']'
++ '[' -z /usr/share/modulefiles ']'
++ findExec PS_CMD /usr/bin/ps ps
++ Nm=PS_CMD
++ confPath=/usr/bin/ps
++ execNm=ps
++ eval PS_CMD=/usr/bin/ps
+++ PS_CMD=/usr/bin/ps
++ '[' '!' -x /usr/bin/ps ']'
++ unset Nm confPath execNm
++ findExec EXPR_CMD /usr/bin/expr expr
++ Nm=EXPR_CMD
++ confPath=/usr/bin/expr
++ execNm=expr
++ eval EXPR_CMD=/usr/bin/expr
+++ EXPR_CMD=/usr/bin/expr
++ '[' '!' -x /usr/bin/expr ']'
++ unset Nm confPath execNm
++ findExec BASENAME_CMD /usr/bin/basename basename
++ Nm=BASENAME_CMD
++ confPath=/usr/bin/basename
++ execNm=basename
++ eval BASENAME_CMD=/usr/bin/basename
+++ BASENAME_CMD=/usr/bin/basename
++ '[' '!' -x /usr/bin/basename ']'
++ unset Nm confPath execNm
++ unset -f findExec
+++ /usr/bin/ps -p 62257 -ocomm=
++ my_shell=sh
+++ /usr/bin/expr sh : '-*\(.*\)'
++ my_shell=sh
+++ /usr/bin/basename sh
++ my_shell=sh
++ '[' -f /usr/share/lmod/lmod/init/sh ']'
++ . /usr/share/lmod/lmod/init/sh
+++ LMOD_ROOT=/usr/share/lmod
+++ LMOD_PKG=/usr/share/lmod/lmod
+++ LMOD_DIR=/usr/share/lmod/lmod/libexec/
+++ LMOD_CMD=/usr/share/lmod/lmod/libexec/lmod
+++ MODULESHOME=/usr/share/lmod/lmod
+++ export LMOD_CMD
+++ export LMOD_PKG
+++ export LMOD_DIR
+++ export MODULESHOME
+++ export LMOD_DIR
++ unset my_shell PS_CMD EXPR_CMD BASENAME_CMD MODULEPATH_INIT
+ for mpi in '' mpich openmpi
+ old_PYTHONPATH=
+ test -n ''
+ cd serial
+ /usr/bin/ctest --output-on-failure --force-new-ctest-process -j4 --verbose
UpdateCTestConfiguration  from :/builddir/build/BUILD/lammps-patch_29Oct2020/serial/DartConfiguration.tcl
Parse Config file:/builddir/build/BUILD/lammps-patch_29Oct2020/serial/DartConfiguration.tcl
UpdateCTestConfiguration  from :/builddir/build/BUILD/lammps-patch_29Oct2020/serial/DartConfiguration.tcl
Parse Config file:/builddir/build/BUILD/lammps-patch_29Oct2020/serial/DartConfiguration.tcl
Test project /builddir/build/BUILD/lammps-patch_29Oct2020/serial
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
      Start  1: Tokenizer
1: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/utils/test_tokenizer
1: Test timeout computed to be: 1500
test 2
      Start  2: MemPool
2: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/utils/test_mempool
2: Test timeout computed to be: 1500
test 3
      Start  3: Utils
3: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/utils/test_utils
3: Environment variables: 
3:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
3: Test timeout computed to be: 1500
test 4
      Start  4: FmtLib
4: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/utils/test_fmtlib
4: Test timeout computed to be: 1500
2: Running main() from gmock_main.cc
2: [==========] Running 5 tests from 2 test suites.
4: Running main() from gmock_main.cc
4: [==========] Running 13 tests from 1 test suite.
4: [----------] Global test environment set-up.
4: [----------] 13 tests from FmtLib
4: [ RUN      ] FmtLib.insert_string
2: [----------] Global test environment set-up.
2: [----------] 3 tests from MyPage
3: Running main() from gmock_main.cc
3: [==========] Running 82 tests from 1 test suite.
3: [----------] Global test environment set-up.
3: [----------] 82 tests from Utils
3: [ RUN      ] Utils.trim
4: [       OK ] FmtLib.insert_string (9 ms)
4: [ RUN      ] FmtLib.insert_int
4: [       OK ] FmtLib.insert_int (1 ms)
4: [ RUN      ] FmtLib.insert_neg_int
4: [       OK ] FmtLib.insert_neg_int (0 ms)
4: [ RUN      ] FmtLib.insert_bigint
4: [       OK ] FmtLib.insert_bigint (1 ms)
4: [ RUN      ] FmtLib.insert_neg_bigint
2: [ RUN      ] MyPage.int
4: [       OK ] FmtLib.insert_neg_bigint (1 ms)
4: [ RUN      ] FmtLib.insert_tagint
1: Running main() from gmock_main.cc
1: [==========] Running 22 tests from 2 test suites.
1: [----------] Global test environment set-up.
4: [  SKIPPED ] FmtLib.insert_tagint (2 ms)
4: [ RUN      ] FmtLib.insert_neg_tagint
4: [  SKIPPED ] FmtLib.insert_neg_tagint (0 ms)
4: [ RUN      ] FmtLib.insert_imageint
4: [  SKIPPED ] FmtLib.insert_imageint (0 ms)
4: [ RUN      ] FmtLib.insert_neg_imageint
1: [----------] 12 tests from Tokenizer
4: [  SKIPPED ] FmtLib.insert_neg_imageint (0 ms)
4: [ RUN      ] FmtLib.insert_double
1: [ RUN      ] Tokenizer.empty_string
4: [       OK ] FmtLib.insert_double (3 ms)
4: [ RUN      ] FmtLib.insert_neg_double
4: [       OK ] FmtLib.insert_neg_double (1 ms)
4: [ RUN      ] FmtLib.int_for_double
1: [       OK ] Tokenizer.empty_string (3 ms)
3: [       OK ] Utils.trim (14 ms)
3: [ RUN      ] Utils.trim_comment
3: [       OK ] Utils.trim_comment (1 ms)
3: [ RUN      ] Utils.count_words
3: [       OK ] Utils.count_words (0 ms)
3: [ RUN      ] Utils.count_words_string
3: [       OK ] Utils.count_words_string (0 ms)
3: [ RUN      ] Utils.count_words_non_default
3: [       OK ] Utils.count_words_non_default (1 ms)
3: [ RUN      ] Utils.trim_and_count_words
3: [       OK ] Utils.trim_and_count_words (0 ms)
3: [ RUN      ] Utils.count_words_with_extra_spaces
3: [       OK ] Utils.count_words_with_extra_spaces (0 ms)
3: [ RUN      ] Utils.split_words_simple
3: [       OK ] Utils.split_words_simple (2 ms)
3: [ RUN      ] Utils.split_words_quoted
3: [       OK ] Utils.split_words_quoted (1 ms)
3: [ RUN      ] Utils.split_words_escaped
3: [       OK ] Utils.split_words_escaped (1 ms)
3: [ RUN      ] Utils.split_words_quote_in_quoted
2: [       OK ] MyPage.int (19 ms)
2: [ RUN      ] MyPage.double
3: [       OK ] Utils.split_words_quote_in_quoted (1 ms)
3: [ RUN      ] Utils.valid_integer1
3: [       OK ] Utils.valid_integer1 (0 ms)
3: [ RUN      ] Utils.valid_integer2
3: [       OK ] Utils.valid_integer2 (0 ms)
3: [ RUN      ] Utils.valid_integer3
3: [       OK ] Utils.valid_integer3 (1 ms)
3: [ RUN      ] Utils.valid_double1
3: [       OK ] Utils.valid_double1 (1 ms)
3: [ RUN      ] Utils.valid_double2
3: [       OK ] Utils.valid_double2 (0 ms)
3: [ RUN      ] Utils.valid_double3
3: [       OK ] Utils.valid_double3 (1 ms)
3: [ RUN      ] Utils.valid_double4
3: [       OK ] Utils.valid_double4 (1 ms)
3: [ RUN      ] Utils.valid_double5
3: [       OK ] Utils.valid_double5 (0 ms)
3: [ RUN      ] Utils.valid_double6
3: [       OK ] Utils.valid_double6 (0 ms)
3: [ RUN      ] Utils.valid_double7
3: [       OK ] Utils.valid_double7 (1 ms)
3: [ RUN      ] Utils.valid_double8
3: [       OK ] Utils.valid_double8 (0 ms)
3: [ RUN      ] Utils.valid_double9
3: [       OK ] Utils.valid_double9 (0 ms)
3: [ RUN      ] Utils.empty_not_an_integer
3: [       OK ] Utils.empty_not_an_integer (1 ms)
3: [ RUN      ] Utils.empty_not_a_double
3: [       OK ] Utils.empty_not_a_double (0 ms)
3: [ RUN      ] Utils.text_not_an_integer
3: [       OK ] Utils.text_not_an_integer (0 ms)
3: [ RUN      ] Utils.text_not_a_double
3: [       OK ] Utils.text_not_a_double (0 ms)
3: [ RUN      ] Utils.double_not_an_integer1
3: [       OK ] Utils.double_not_an_integer1 (0 ms)
3: [ RUN      ] Utils.double_not_an_integer2
3: [       OK ] Utils.double_not_an_integer2 (1 ms)
3: [ RUN      ] Utils.double_not_an_integer3
3: [       OK ] Utils.double_not_an_integer3 (0 ms)
3: [ RUN      ] Utils.integer_is_double1
3: [       OK ] Utils.integer_is_double1 (1 ms)
3: [ RUN      ] Utils.integer_is_double2
3: [       OK ] Utils.integer_is_double2 (0 ms)
3: [ RUN      ] Utils.is_double_with_exponential
3: [       OK ] Utils.is_double_with_exponential (0 ms)
3: [ RUN      ] Utils.is_double_with_neg_exponential
3: [       OK ] Utils.is_double_with_neg_exponential (1 ms)
3: [ RUN      ] Utils.is_double_with_pos_exponential
3: [       OK ] Utils.is_double_with_pos_exponential (0 ms)
3: [ RUN      ] Utils.signed_double_and_exponential
3: [       OK ] Utils.signed_double_and_exponential (1 ms)
3: [ RUN      ] Utils.is_double_with_d_exponential
3: [       OK ] Utils.is_double_with_d_exponential (0 ms)
3: [ RUN      ] Utils.is_double_with_neg_d_exponential
3: [       OK ] Utils.is_double_with_neg_d_exponential (0 ms)
3: [ RUN      ] Utils.signed_double_and_d_exponential
3: [       OK ] Utils.signed_double_and_d_exponential (1 ms)
3: [ RUN      ] Utils.strmatch_beg
3: [       OK ] Utils.strmatch_beg (0 ms)
2: [       OK ] MyPage.double (14 ms)
2: [ RUN      ] MyPage.bigint
2: [       OK ] MyPage.bigint (3 ms)
2: [----------] 3 tests from MyPage (40 ms total)
2: 
2: [----------] 2 tests from MyPoolChunk
2: [ RUN      ] MyPoolChunk.int
1: [ RUN      ] Tokenizer.whitespace_only
1: [       OK ] Tokenizer.whitespace_only (0 ms)
1: [ RUN      ] Tokenizer.single_word
1: [       OK ] Tokenizer.single_word (0 ms)
1: [ RUN      ] Tokenizer.two_words
1: [       OK ] Tokenizer.two_words (0 ms)
1: [ RUN      ] Tokenizer.prefix_separators
1: [       OK ] Tokenizer.prefix_separators (0 ms)
1: [ RUN      ] Tokenizer.postfix_separators
1: [       OK ] Tokenizer.postfix_separators (0 ms)
1: [ RUN      ] Tokenizer.iterate_words
1: [       OK ] Tokenizer.iterate_words (2 ms)
1: [ RUN      ] Tokenizer.no_separator_path
1: [       OK ] Tokenizer.no_separator_path (1 ms)
1: [ RUN      ] Tokenizer.unix_paths
1: [       OK ] Tokenizer.unix_paths (1 ms)
1: [ RUN      ] Tokenizer.windows_paths
1: [       OK ] Tokenizer.windows_paths (1 ms)
1: [ RUN      ] Tokenizer.default_separators
1: [       OK ] Tokenizer.default_separators (1 ms)
1: [ RUN      ] Tokenizer.as_vector
3: [ RUN      ] Utils.strmatch_mid1
3: [       OK ] Utils.strmatch_mid1 (0 ms)
3: [ RUN      ] Utils.strmatch_mid2
3: [       OK ] Utils.strmatch_mid2 (0 ms)
3: [ RUN      ] Utils.strmatch_end
3: [       OK ] Utils.strmatch_end (1 ms)
3: [ RUN      ] Utils.no_strmatch_beg
3: [       OK ] Utils.no_strmatch_beg (0 ms)
3: [ RUN      ] Utils.no_strmatch_mid
3: [       OK ] Utils.no_strmatch_mid (1 ms)
3: [ RUN      ] Utils.no_strmatch_end
3: [       OK ] Utils.no_strmatch_end (0 ms)
3: [ RUN      ] Utils.strmatch_whole_line
3: [       OK ] Utils.strmatch_whole_line (0 ms)
3: [ RUN      ] Utils.no_strmatch_whole_line
3: [       OK ] Utils.no_strmatch_whole_line (0 ms)
3: [ RUN      ] Utils.strmatch_integer_in_line
3: [       OK ] Utils.strmatch_integer_in_line (1 ms)
3: [ RUN      ] Utils.strmatch_float_in_line
3: [       OK ] Utils.strmatch_float_in_line (0 ms)
3: [ RUN      ] Utils.strmatch_int_as_float_in_line
3: [       OK ] Utils.strmatch_int_as_float_in_line (0 ms)
3: [ RUN      ] Utils.strmatch_char_range
3: [       OK ] Utils.strmatch_char_range (0 ms)
3: [ RUN      ] Utils.strmatch_notchar_range
3: [       OK ] Utils.strmatch_notchar_range (0 ms)
3: [ RUN      ] Utils.strmatch_backslash
3: [       OK ] Utils.strmatch_backslash (1 ms)
3: [ RUN      ] Utils.strmatch_opt_range
3: [       OK ] Utils.strmatch_opt_range (0 ms)
3: [ RUN      ] Utils.strmatch_opt_char
3: [       OK ] Utils.strmatch_opt_char (0 ms)
3: [ RUN      ] Utils.strmatch_dot
3: [       OK ] Utils.strmatch_dot (0 ms)
3: [ RUN      ] Utils.strmatch_digit_nondigit
3: [       OK ] Utils.strmatch_digit_nondigit (1 ms)
3: [ RUN      ] Utils.strmatch_integer_noninteger
3: [       OK ] Utils.strmatch_integer_noninteger (0 ms)
3: [ RUN      ] Utils.strmatch_float_nonfloat
3: [       OK ] Utils.strmatch_float_nonfloat (0 ms)
3: [ RUN      ] Utils.strmatch_whitespace_nonwhitespace
3: [       OK ] Utils.strmatch_whitespace_nonwhitespace (1 ms)
3: [ RUN      ] Utils.bounds_case1
3: [       OK ] Utils.bounds_case1 (1 ms)
3: [ RUN      ] Utils.bounds_case2
3: [       OK ] Utils.bounds_case2 (0 ms)
3: [ RUN      ] Utils.bounds_case3
3: [       OK ] Utils.bounds_case3 (0 ms)
3: [ RUN      ] Utils.bounds_case4
3: [       OK ] Utils.bounds_case4 (1 ms)
3: [ RUN      ] Utils.bounds_case5
3: [       OK ] Utils.bounds_case5 (1 ms)
3: [ RUN      ] Utils.boundsbig_case1
3: [       OK ] Utils.boundsbig_case1 (0 ms)
3: [ RUN      ] Utils.boundsbig_case2
2: [       OK ] MyPoolChunk.int (13 ms)
2: [ RUN      ] MyPoolChunk.double
2: [       OK ] MyPoolChunk.double (2 ms)
2: [----------] 2 tests from MyPoolChunk (17 ms total)
2: 
2: [----------] Global test environment tear-down
2: [==========] 5 tests from 2 test suites ran. (78 ms total)
2: [  PASSED  ] 5 tests.
4: [       OK ] FmtLib.int_for_double (42 ms)
4: [ RUN      ] FmtLib.double_for_int
4: [       OK ] FmtLib.double_for_int (3 ms)
4: [----------] 13 tests from FmtLib (73 ms total)
4: 
4: [----------] Global test environment tear-down
4: [==========] 13 tests from 1 test suite ran. (78 ms total)
4: [  PASSED  ] 9 tests.
4: [  SKIPPED ] 4 tests, listed below:
4: [  SKIPPED ] FmtLib.insert_tagint
4: [  SKIPPED ] FmtLib.insert_neg_tagint
4: [  SKIPPED ] FmtLib.insert_imageint
4: [  SKIPPED ] FmtLib.insert_neg_imageint
3: [       OK ] Utils.boundsbig_case2 (1 ms)
3: [ RUN      ] Utils.boundsbig_case3
3: [       OK ] Utils.boundsbig_case3 (1 ms)
3: [ RUN      ] Utils.boundsbig_case4
3: [       OK ] Utils.boundsbig_case4 (1 ms)
3: [ RUN      ] Utils.boundsbig_case5
3: [       OK ] Utils.boundsbig_case5 (0 ms)
3: [ RUN      ] Utils.guesspath
3: [       OK ] Utils.guesspath (10 ms)
3: [ RUN      ] Utils.path_join
3: [       OK ] Utils.path_join (2 ms)
3: [ RUN      ] Utils.path_basename
1: [       OK ] Tokenizer.as_vector (1 ms)
1: [----------] 12 tests from Tokenizer (78 ms total)
1: 
1: [----------] 10 tests from ValueTokenizer
1: [ RUN      ] ValueTokenizer.empty_string
1: [       OK ] ValueTokenizer.empty_string (1 ms)
1: [ RUN      ] ValueTokenizer.bad_integer
3: [       OK ] Utils.path_basename (9 ms)
3: [ RUN      ] Utils.path_dirname
3: [       OK ] Utils.path_dirname (2 ms)
3: [ RUN      ] Utils.getsyserror
3: [       OK ] Utils.getsyserror (2 ms)
3: [ RUN      ] Utils.potential_file
 1/32 Test  #2: MemPool ..........................   Passed    1.58 sec
test 5
      Start  5: MathEigen
5: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/utils/test_math_eigen_impl "10" "5"
5: Test timeout computed to be: 1500
3: [       OK ] Utils.potential_file (52 ms)
3: [ RUN      ] Utils.unit_conversion
3: [       OK ] Utils.unit_conversion (1 ms)
3: [ RUN      ] Utils.timespec2seconds_ss
3: [       OK ] Utils.timespec2seconds_ss (2 ms)
3: [ RUN      ] Utils.timespec2seconds_mmss
3: [       OK ] Utils.timespec2seconds_mmss (1 ms)
3: [ RUN      ] Utils.timespec2seconds_hhmmss
3: [       OK ] Utils.timespec2seconds_hhmmss (0 ms)
3: [ RUN      ] Utils.date2num
3: [       OK ] Utils.date2num (2 ms)
3: [----------] 82 tests from Utils (165 ms total)
3: 
3: [----------] Global test environment tear-down
3: [==========] 82 tests from 1 test suite ran. (172 ms total)
3: [  PASSED  ] 82 tests.
1: [       OK ] ValueTokenizer.bad_integer (89 ms)
1: [ RUN      ] ValueTokenizer.bad_double
1: [       OK ] ValueTokenizer.bad_double (3 ms)
1: [ RUN      ] ValueTokenizer.valid_int
1: [       OK ] ValueTokenizer.valid_int (1 ms)
1: [ RUN      ] ValueTokenizer.valid_tagint
1: [       OK ] ValueTokenizer.valid_tagint (1 ms)
1: [ RUN      ] ValueTokenizer.valid_bigint
1: [       OK ] ValueTokenizer.valid_bigint (1 ms)
1: [ RUN      ] ValueTokenizer.valid_double
1: [       OK ] ValueTokenizer.valid_double (2 ms)
1: [ RUN      ] ValueTokenizer.valid_double_with_exponential
1: [       OK ] ValueTokenizer.valid_double_with_exponential (0 ms)
1: [ RUN      ] ValueTokenizer.contains
1: [       OK ] ValueTokenizer.contains (18 ms)
1: [ RUN      ] ValueTokenizer.not_contains
1: [       OK ] ValueTokenizer.not_contains (1 ms)
1: [----------] 10 tests from ValueTokenizer (123 ms total)
1: 
1: [----------] Global test environment tear-down
1: [==========] 22 tests from 2 test suites ran. (227 ms total)
1: [  PASSED  ] 22 tests.
 2/32 Test  #1: Tokenizer ........................   Passed    1.76 sec
test 6
      Start  6: AtomStyles
6: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/test_atom_styles
6: Test timeout computed to be: 1500
 3/32 Test  #3: Utils ............................   Passed    1.73 sec
test 7
      Start  7: PairUnitConvert
7: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/test_pair_unit_convert
7: Environment variables: 
7:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
7: Test timeout computed to be: 1500
 4/32 Test  #4: FmtLib ...........................   Passed    1.72 sec
test 8
      Start  8: PotentialFileReader
8: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/test_potential_file_reader
8: Environment variables: 
8:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
8: Test timeout computed to be: 1500
5: 
5: -- Diagonalization test (real symmetric)  --
5: test passed
5: 
 5/32 Test  #5: MathEigen ........................   Passed    0.28 sec
test 9
      Start  9: EIMPotentialFileReader
9: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/test_eim_potential_file_reader
9: Environment variables: 
9:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
9: Test timeout computed to be: 1500
6: [==========] Running 12 tests from 1 test suite.
6: [----------] Global test environment set-up.
6: [----------] 12 tests from AtomStyleTest
6: [ RUN      ] AtomStyleTest.atomic
7: [==========] Running 20 tests from 1 test suite.
7: [----------] Global test environment set-up.
7: [----------] 20 tests from PairUnitConvertTest
7: [ RUN      ] PairUnitConvertTest.zero
9: [==========] Running 5 tests from 1 test suite.
9: [----------] Global test environment set-up.
9: [----------] 5 tests from EIMPotentialFileReaderTest
9: [ RUN      ] EIMPotentialFileReaderTest.global_line
8: [==========] Running 15 tests from 1 test suite.
8: [----------] Global test environment set-up.
8: [----------] 15 tests from PotentialFileReaderTest
8: [ RUN      ] PotentialFileReaderTest.Sw_native
9: [       OK ] EIMPotentialFileReaderTest.global_line (262 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.element_line_sequential
8: [       OK ] PotentialFileReaderTest.Sw_native (247 ms)
8: [ RUN      ] PotentialFileReaderTest.Sw_conv
9: [       OK ] EIMPotentialFileReaderTest.element_line_sequential (81 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.element_line_random
7: [       OK ] PairUnitConvertTest.zero (533 ms)
7: [ RUN      ] PairUnitConvertTest.lj_cut
8: [       OK ] PotentialFileReaderTest.Sw_conv (77 ms)
8: [ RUN      ] PotentialFileReaderTest.Sw_noconv
9: [       OK ] EIMPotentialFileReaderTest.element_line_random (58 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.pair_line
6: [       OK ] AtomStyleTest.atomic (644 ms)
6: [ RUN      ] AtomStyleTest.charge
9: [       OK ] EIMPotentialFileReaderTest.pair_line (53 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.pair_identical
8: [       OK ] PotentialFileReaderTest.Sw_noconv (104 ms)
8: [ RUN      ] PotentialFileReaderTest.Comb
9: [       OK ] EIMPotentialFileReaderTest.pair_identical (40 ms)
9: [----------] 5 tests from EIMPotentialFileReaderTest (503 ms total)
9: 
9: [----------] Global test environment tear-down
9: [==========] 5 tests from 1 test suite ran. (515 ms total)
9: [  PASSED  ] 5 tests.
8: [       OK ] PotentialFileReaderTest.Comb (58 ms)
8: [ RUN      ] PotentialFileReaderTest.Comb3
 6/32 Test  #9: EIMPotentialFileReader ...........   Passed    1.09 sec
test 10
      Start 10: FileOperations
10: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/test_file_operations
10: Test timeout computed to be: 1500
8: [       OK ] PotentialFileReaderTest.Comb3 (68 ms)
8: [ RUN      ] PotentialFileReaderTest.Tersoff
6: [       OK ] AtomStyleTest.charge (188 ms)
6: [ RUN      ] AtomStyleTest.sphere
8: [       OK ] PotentialFileReaderTest.Tersoff (57 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffMod
8: [       OK ] PotentialFileReaderTest.TersoffMod (41 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffModC
7: [       OK ] PairUnitConvertTest.lj_cut (345 ms)
7: [ RUN      ] PairUnitConvertTest.eam
6: [       OK ] AtomStyleTest.sphere (96 ms)
6: [ RUN      ] AtomStyleTest.ellipsoid
8: [       OK ] PotentialFileReaderTest.TersoffModC (45 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffTable
8: [       OK ] PotentialFileReaderTest.TersoffTable (44 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffZBL
7: [       OK ] PairUnitConvertTest.eam (563 ms)
7: [ RUN      ] PairUnitConvertTest.eam_alloy
8: [       OK ] PotentialFileReaderTest.TersoffZBL (595 ms)
8: [ RUN      ] PotentialFileReaderTest.GW
6: [       OK ] AtomStyleTest.ellipsoid (729 ms)
6: [ RUN      ] AtomStyleTest.line
10: [==========] Running 3 tests from 1 test suite.
10: [----------] Global test environment set-up.
10: [----------] 3 tests from FileOperationsTest
10: [ RUN      ] FileOperationsTest.safe_fgets
8: [       OK ] PotentialFileReaderTest.GW (168 ms)
8: [ RUN      ] PotentialFileReaderTest.GWZBL
8: [       OK ] PotentialFileReaderTest.GWZBL (78 ms)
8: [ RUN      ] PotentialFileReaderTest.Nb3bHarmonic
8: [       OK ] PotentialFileReaderTest.Nb3bHarmonic (76 ms)
8: [ RUN      ] PotentialFileReaderTest.Vashishta
10: [       OK ] FileOperationsTest.safe_fgets (292 ms)
10: [ RUN      ] FileOperationsTest.safe_fread
8: [       OK ] PotentialFileReaderTest.Vashishta (78 ms)
8: [ RUN      ] PotentialFileReaderTest.UnitConvert
10: [       OK ] FileOperationsTest.safe_fread (64 ms)
10: [ RUN      ] FileOperationsTest.logmesg
8: [       OK ] PotentialFileReaderTest.UnitConvert (86 ms)
8: [----------] 15 tests from PotentialFileReaderTest (1864 ms total)
8: 
8: [----------] Global test environment tear-down
8: [==========] 15 tests from 1 test suite ran. (1881 ms total)
8: [  PASSED  ] 15 tests.
 7/32 Test  #8: PotentialFileReader ..............   Passed    2.61 sec
test 11
      Start 11: DumpAtom
11: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/test_dump_atom
11: Environment variables: 
11:  BINARY2TXT_BINARY=/builddir/build/BUILD/lammps-patch_29Oct2020/serial/binary2txt
11: Test timeout computed to be: 1500
10: [       OK ] FileOperationsTest.logmesg (154 ms)
10: [----------] 3 tests from FileOperationsTest (512 ms total)
10: 
10: [----------] Global test environment tear-down
10: [==========] 3 tests from 1 test suite ran. (524 ms total)
10: [  PASSED  ] 3 tests.
6: [       OK ] AtomStyleTest.line (599 ms)
6: [ RUN      ] AtomStyleTest.tri
 8/32 Test #10: FileOperations ...................   Passed    1.55 sec
test 12
      Start 12: DumpCustom
12: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/test_dump_custom
12: Environment variables: 
12:  BINARY2TXT_BINARY=/builddir/build/BUILD/lammps-patch_29Oct2020/serial/binary2txt
12: Test timeout computed to be: 1500
7: [       OK ] PairUnitConvertTest.eam_alloy (941 ms)
7: [ RUN      ] PairUnitConvertTest.eam_fs
6: [       OK ] AtomStyleTest.tri (270 ms)
6: [ RUN      ] AtomStyleTest.body_nparticle
6: [       OK ] AtomStyleTest.body_nparticle (179 ms)
6: [ RUN      ] AtomStyleTest.template
12: [==========] Running 9 tests from 1 test suite.
12: [----------] Global test environment set-up.
12: [----------] 9 tests from DumpCustomTest
12: [ RUN      ] DumpCustomTest.run1
11: [==========] Running 31 tests from 1 test suite.
11: [----------] Global test environment set-up.
11: [----------] 31 tests from DumpAtomTest
11: [ RUN      ] DumpAtomTest.run0
6: [       OK ] AtomStyleTest.template (277 ms)
6: [ RUN      ] AtomStyleTest.template_charge
6: [       OK ] AtomStyleTest.template_charge (131 ms)
6: [ RUN      ] AtomStyleTest.bond
12: [       OK ] DumpCustomTest.run1 (332 ms)
12: [ RUN      ] DumpCustomTest.thresh_run0
11: [       OK ] DumpAtomTest.run0 (331 ms)
11: [ RUN      ] DumpAtomTest.format_line_run0
6: [       OK ] AtomStyleTest.bond (138 ms)
6: [ RUN      ] AtomStyleTest.angle
12: [       OK ] DumpCustomTest.thresh_run0 (127 ms)
12: [ RUN      ] DumpCustomTest.compute_run0
11: [       OK ] DumpAtomTest.format_line_run0 (125 ms)
11: [ RUN      ] DumpAtomTest.no_scale_run0
11: [       OK ] DumpAtomTest.no_scale_run0 (44 ms)
11: [ RUN      ] DumpAtomTest.no_buffer_no_scale_run0
12: [       OK ] DumpCustomTest.compute_run0 (68 ms)
12: [ RUN      ] DumpCustomTest.fix_run0
11: [       OK ] DumpAtomTest.no_buffer_no_scale_run0 (51 ms)
11: [ RUN      ] DumpAtomTest.no_buffer_with_scale_run0
6: [       OK ] AtomStyleTest.angle (142 ms)
6: [ RUN      ] AtomStyleTest.full_ellipsoid
11: [       OK ] DumpAtomTest.no_buffer_with_scale_run0 (50 ms)
11: [ RUN      ] DumpAtomTest.with_image_run0
11: [       OK ] DumpAtomTest.with_image_run0 (44 ms)
11: [ RUN      ] DumpAtomTest.with_units_run0
11: [       OK ] DumpAtomTest.with_units_run0 (42 ms)
11: [ RUN      ] DumpAtomTest.with_time_run0
11: [       OK ] DumpAtomTest.with_time_run0 (41 ms)
11: [ RUN      ] DumpAtomTest.with_units_run1
6: [       OK ] AtomStyleTest.full_ellipsoid (188 ms)
6: [----------] 12 tests from AtomStyleTest (3592 ms total)
6: 
6: [----------] Global test environment tear-down
6: [==========] 12 tests from 1 test suite ran. (3600 ms total)
6: [  PASSED  ] 12 tests.
11: [       OK ] DumpAtomTest.with_units_run1 (58 ms)
11: [ RUN      ] DumpAtomTest.no_buffer_with_scale_and_image_run0
 9/32 Test  #6: AtomStyles .......................   Passed    4.19 sec
test 13
      Start 13: DumpCfg
13: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/formats/test_dump_cfg
13: Environment variables: 
13:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
13: Test timeout computed to be: 1500
12: [       OK ] DumpCustomTest.fix_run0 (372 ms)
12: [ RUN      ] DumpCustomTest.custom_run0
11: [       OK ] DumpAtomTest.no_buffer_with_scale_and_image_run0 (105 ms)
11: [ RUN      ] DumpAtomTest.triclinic_run0
12: [       OK ] DumpCustomTest.custom_run0 (49 ms)
12: [ RUN      ] DumpCustomTest.binary_run1
11: [       OK ] DumpAtomTest.triclinic_run0 (55 ms)
11: [ RUN      ] DumpAtomTest.triclinic_with_units_run0
11: [       OK ] DumpAtomTest.triclinic_with_units_run0 (48 ms)
11: [ RUN      ] DumpAtomTest.triclinic_with_time_run0
11: [       OK ] DumpAtomTest.triclinic_with_time_run0 (79 ms)
11: [ RUN      ] DumpAtomTest.triclinic_with_image_run0
11: [       OK ] DumpAtomTest.triclinic_with_image_run0 (43 ms)
11: [ RUN      ] DumpAtomTest.binary_run0
12: [       OK ] DumpCustomTest.binary_run1 (239 ms)
12: [ RUN      ] DumpCustomTest.triclinic_run1
12: [       OK ] DumpCustomTest.triclinic_run1 (55 ms)
12: [ RUN      ] DumpCustomTest.binary_triclinic_run1
13: [==========] Running 6 tests from 1 test suite.
13: [----------] Global test environment set-up.
13: [----------] 6 tests from DumpCfgTest
13: [ RUN      ] DumpCfgTest.invalid_options
11: [       OK ] DumpAtomTest.binary_run0 (203 ms)
11: [ RUN      ] DumpAtomTest.binary_with_units_run0
12: [       OK ] DumpCustomTest.binary_triclinic_run1 (206 ms)
12: [ RUN      ] DumpCustomTest.with_variable_run1
12: [       OK ] DumpCustomTest.with_variable_run1 (47 ms)
12: [----------] 9 tests from DumpCustomTest (1506 ms total)
12: 
12: [----------] Global test environment tear-down
12: [==========] 9 tests from 1 test suite ran. (1517 ms total)
12: [  PASSED  ] 9 tests.
10/32 Test #12: DumpCustom .......................   Passed    2.04 sec
test 14
      Start 14: SimpleCommands
14: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/test_simple_commands
14: Test timeout computed to be: 1500
11: [       OK ] DumpAtomTest.binary_with_units_run0 (212 ms)
11: [ RUN      ] DumpAtomTest.binary_with_time_run0
13: [       OK ] DumpCfgTest.invalid_options (267 ms)
13: [ RUN      ] DumpCfgTest.require_multifile
13: [       OK ] DumpCfgTest.require_multifile (80 ms)
13: [ RUN      ] DumpCfgTest.run0
13: [       OK ] DumpCfgTest.run0 (88 ms)
13: [ RUN      ] DumpCfgTest.unwrap_run0
11: [       OK ] DumpAtomTest.binary_with_time_run0 (211 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_run0
13: [       OK ] DumpCfgTest.unwrap_run0 (58 ms)
13: [ RUN      ] DumpCfgTest.no_buffer_run0
13: [       OK ] DumpCfgTest.no_buffer_run0 (44 ms)
13: [ RUN      ] DumpCfgTest.no_unwrap_no_buffer_run0
13: [       OK ] DumpCfgTest.no_unwrap_no_buffer_run0 (39 ms)
13: [----------] 6 tests from DumpCfgTest (580 ms total)
13: 
13: [----------] Global test environment tear-down
13: [==========] 6 tests from 1 test suite ran. (590 ms total)
13: [  PASSED  ] 6 tests.
11/32 Test #13: DumpCfg ..........................   Passed    1.08 sec
test 15
      Start 15: LatticeRegion
15: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/test_lattice_region
15: Test timeout computed to be: 1500
11: [       OK ] DumpAtomTest.binary_triclinic_run0 (227 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_with_units_run0
14: [==========] Running 10 tests from 1 test suite.
14: [----------] Global test environment set-up.
14: [----------] 10 tests from SimpleCommandsTest
14: [ RUN      ] SimpleCommandsTest.UnknownCommand
7: [       OK ] PairUnitConvertTest.eam_fs (2567 ms)
7: [ RUN      ] PairUnitConvertTest.eam_cd
11: [       OK ] DumpAtomTest.binary_triclinic_with_units_run0 (227 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_with_time_run0
14: [       OK ] SimpleCommandsTest.UnknownCommand (233 ms)
14: [ RUN      ] SimpleCommandsTest.Echo
14: [       OK ] SimpleCommandsTest.Echo (102 ms)
15: [==========] Running 20 tests from 1 test suite.
15: [----------] Global test environment set-up.
15: [----------] 20 tests from LatticeRegionTest
14: [ RUN      ] SimpleCommandsTest.Log
15: [ RUN      ] LatticeRegionTest.lattice_none
14: [       OK ] SimpleCommandsTest.Log (38 ms)
14: [ RUN      ] SimpleCommandsTest.Quit
11: [       OK ] DumpAtomTest.binary_triclinic_with_time_run0 (219 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_with_image_run0
14: [       OK ] SimpleCommandsTest.Quit (175 ms)
14: [ RUN      ] SimpleCommandsTest.ResetTimestep
15: [       OK ] LatticeRegionTest.lattice_none (262 ms)
15: [ RUN      ] LatticeRegionTest.lattice_sc
14: [       OK ] SimpleCommandsTest.ResetTimestep (47 ms)
14: [ RUN      ] SimpleCommandsTest.Suffix
11: [       OK ] DumpAtomTest.binary_triclinic_with_image_run0 (217 ms)
11: [ RUN      ] DumpAtomTest.run1
11: [       OK ] DumpAtomTest.run1 (45 ms)
11: [ RUN      ] DumpAtomTest.run2
14: [       OK ] SimpleCommandsTest.Suffix (71 ms)
14: [ RUN      ] SimpleCommandsTest.Thermo
11: [       OK ] DumpAtomTest.run2 (49 ms)
11: [ RUN      ] DumpAtomTest.multi_file_run1
15: [       OK ] LatticeRegionTest.lattice_sc (131 ms)
15: [ RUN      ] LatticeRegionTest.lattice_bcc
14: [       OK ] SimpleCommandsTest.Thermo (58 ms)
14: [ RUN      ] SimpleCommandsTest.TimeStep
15: [       OK ] LatticeRegionTest.lattice_bcc (41 ms)
15: [ RUN      ] LatticeRegionTest.lattice_fcc
14: [       OK ] SimpleCommandsTest.TimeStep (40 ms)
14: [ RUN      ] SimpleCommandsTest.Units
11: [       OK ] DumpAtomTest.multi_file_run1 (64 ms)
11: [ RUN      ] DumpAtomTest.per_processor_file_run1
15: [       OK ] LatticeRegionTest.lattice_fcc (54 ms)
15: [ RUN      ] LatticeRegionTest.lattice_hcp
11: [       OK ] DumpAtomTest.per_processor_file_run1 (64 ms)
11: [ RUN      ] DumpAtomTest.per_processor_multi_file_run1
14: [       OK ] SimpleCommandsTest.Units (88 ms)
14: [ RUN      ] SimpleCommandsTest.Shell
15: [       OK ] LatticeRegionTest.lattice_hcp (61 ms)
15: [ RUN      ] LatticeRegionTest.lattice_diamond
14: [       OK ] SimpleCommandsTest.Shell (32 ms)
14: [----------] 10 tests from SimpleCommandsTest (904 ms total)
14: 
14: [----------] Global test environment tear-down
14: [==========] 10 tests from 1 test suite ran. (915 ms total)
14: [  PASSED  ] 10 tests.
12/32 Test #14: SimpleCommands ...................   Passed    1.42 sec
test 16
      Start 16: KimCommands
16: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/test_kim_commands
16: Test timeout computed to be: 1500
7: [       OK ] PairUnitConvertTest.eam_cd (801 ms)
7: [ RUN      ] PairUnitConvertTest.eim
15: [       OK ] LatticeRegionTest.lattice_diamond (74 ms)
15: [ RUN      ] LatticeRegionTest.lattice_sq
11: [       OK ] DumpAtomTest.per_processor_multi_file_run1 (141 ms)
11: [ RUN      ] DumpAtomTest.dump_modify_scale_invalid
15: [       OK ] LatticeRegionTest.lattice_sq (60 ms)
15: [ RUN      ] LatticeRegionTest.lattice_sq2
11: [       OK ] DumpAtomTest.dump_modify_scale_invalid (68 ms)
11: [ RUN      ] DumpAtomTest.dump_modify_image_invalid
15: [       OK ] LatticeRegionTest.lattice_sq2 (54 ms)
15: [ RUN      ] LatticeRegionTest.lattice_hex
11: [       OK ] DumpAtomTest.dump_modify_image_invalid (76 ms)
11: [ RUN      ] DumpAtomTest.dump_modify_invalid
15: [       OK ] LatticeRegionTest.lattice_hex (59 ms)
15: [ RUN      ] LatticeRegionTest.lattice_custom
11: [       OK ] DumpAtomTest.dump_modify_invalid (39 ms)
11: [ RUN      ] DumpAtomTest.write_dump
15: [       OK ] LatticeRegionTest.lattice_custom (78 ms)
15: [ RUN      ] LatticeRegionTest.region_fail
11: [       OK ] DumpAtomTest.write_dump (50 ms)
11: [ RUN      ] DumpAtomTest.binary_write_dump
15: [       OK ] LatticeRegionTest.region_fail (42 ms)
15: [ RUN      ] LatticeRegionTest.region_block_lattice
15: [       OK ] LatticeRegionTest.region_block_lattice (37 ms)
15: [ RUN      ] LatticeRegionTest.region_block_box
15: [       OK ] LatticeRegionTest.region_block_box (29 ms)
15: [ RUN      ] LatticeRegionTest.region_cone
15: [       OK ] LatticeRegionTest.region_cone (45 ms)
15: [ RUN      ] LatticeRegionTest.region_cylinder
16: [==========] Running 4 tests from 1 test suite.
16: [----------] Global test environment set-up.
16: [----------] 4 tests from KimCommandsTest
16: [ RUN      ] KimCommandsTest.kim_init
15: [       OK ] LatticeRegionTest.region_cylinder (33 ms)
15: [ RUN      ] LatticeRegionTest.region_prism
15: [       OK ] LatticeRegionTest.region_prism (36 ms)
15: [ RUN      ] LatticeRegionTest.region_sphere
15: [       OK ] LatticeRegionTest.region_sphere (26 ms)
15: [ RUN      ] LatticeRegionTest.region_union
15: [       OK ] LatticeRegionTest.region_union (28 ms)
15: [ RUN      ] LatticeRegionTest.region_intersect
15: [       OK ] LatticeRegionTest.region_intersect (48 ms)
15: [ RUN      ] LatticeRegionTest.region_plane
15: [       OK ] LatticeRegionTest.region_plane (30 ms)
15: [----------] 20 tests from LatticeRegionTest (1253 ms total)
15: 
15: [----------] Global test environment tear-down
15: [==========] 20 tests from 1 test suite ran. (1261 ms total)
15: [  PASSED  ] 20 tests.
13/32 Test #15: LatticeRegion ....................   Passed    1.75 sec
test 17
      Start 17: ResetIDs
17: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/commands/test_reset_ids
17: Test timeout computed to be: 1500
11: [       OK ] DumpAtomTest.binary_write_dump (479 ms)
11: [----------] 31 tests from DumpAtomTest (3716 ms total)
11: 
11: [----------] Global test environment tear-down
11: [==========] 31 tests from 1 test suite ran. (3736 ms total)
11: [  PASSED  ] 31 tests.
14/32 Test #11: DumpAtom .........................   Passed    4.37 sec
test 18
      Start 18: LibraryOpen
18: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/test_library_open
18: Test timeout computed to be: 1500
16: [       OK ] KimCommandsTest.kim_init (517 ms)
16: [ RUN      ] KimCommandsTest.kim_interactions
17: [==========] Running 7 tests from 2 test suites.
17: [----------] Global test environment set-up.
17: [----------] 6 tests from ResetIDsTest
17: [ RUN      ] ResetIDsTest.MolIDAll
18: [==========] Running 6 tests from 3 test suites.
18: [----------] Global test environment set-up.
18: [----------] 3 tests from lammps_open
18: [ RUN      ] lammps_open.null_args
16: [       OK ] KimCommandsTest.kim_interactions (451 ms)
16: [ RUN      ] KimCommandsTest.kim_param
18: [       OK ] lammps_open.null_args (197 ms)
18: [ RUN      ] lammps_open.with_args
18: Using a 'void **' argument to return the LAMMPS handle is deprecated.  Please use the return value instead.
18: [       OK ] lammps_open.with_args (53 ms)
18: [ RUN      ] lammps_open.with_kokkos
18: [  SKIPPED ] lammps_open.with_kokkos (2 ms)
18: [----------] 3 tests from lammps_open (259 ms total)
18: 
18: [----------] 2 tests from lammps_open_no_mpi
18: [ RUN      ] lammps_open_no_mpi.no_screen
18: [       OK ] lammps_open_no_mpi.no_screen (43 ms)
18: [ RUN      ] lammps_open_no_mpi.with_omp
18: [       OK ] lammps_open_no_mpi.with_omp (68 ms)
18: [----------] 2 tests from lammps_open_no_mpi (114 ms total)
18: 
18: [----------] 1 test from lammps_open_fortran
18: [ RUN      ] lammps_open_fortran.no_args
18: [       OK ] lammps_open_fortran.no_args (32 ms)
18: [----------] 1 test from lammps_open_fortran (33 ms total)
18: 
18: [----------] Global test environment tear-down
18: [==========] 6 tests from 3 test suites ran. (421 ms total)
18: [  PASSED  ] 5 tests.
18: [  SKIPPED ] 1 test, listed below:
18: [  SKIPPED ] lammps_open.with_kokkos
15/32 Test #18: LibraryOpen ......................   Passed    0.90 sec
test 19
      Start 19: LibraryCommands
19: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/test_library_commands
19: Test timeout computed to be: 1500
17: [       OK ] ResetIDsTest.MolIDAll (496 ms)
17: [ RUN      ] ResetIDsTest.DeletePlusAtomID
17: [       OK ] ResetIDsTest.DeletePlusAtomID (207 ms)
17: [ RUN      ] ResetIDsTest.PartialOffset
17: [       OK ] ResetIDsTest.PartialOffset (107 ms)
17: [ RUN      ] ResetIDsTest.DeleteAdd
17: [       OK ] ResetIDsTest.DeleteAdd (113 ms)
17: [ RUN      ] ResetIDsTest.TopologyData
19: [==========] Running 4 tests from 1 test suite.
19: [----------] Global test environment set-up.
19: [----------] 4 tests from LibraryCommands
19: [ RUN      ] LibraryCommands.from_file
17: [       OK ] ResetIDsTest.TopologyData (90 ms)
17: [ RUN      ] ResetIDsTest.DeathTests
17: [       OK ] ResetIDsTest.DeathTests (165 ms)
17: [----------] 6 tests from ResetIDsTest (1188 ms total)
17: 
17: [----------] 1 test from ResetMolIds
17: [ RUN      ] ResetMolIds.CMDFail
19: [       OK ] LibraryCommands.from_file (241 ms)
19: [ RUN      ] LibraryCommands.from_line
17: [       OK ] ResetMolIds.CMDFail (58 ms)
17: [----------] 1 test from ResetMolIds (58 ms total)
17: 
17: [----------] Global test environment tear-down
17: [==========] 7 tests from 2 test suites ran. (1268 ms total)
17: [  PASSED  ] 7 tests.
19: [       OK ] LibraryCommands.from_line (48 ms)
19: [ RUN      ] LibraryCommands.from_list
7: [       OK ] PairUnitConvertTest.eim (2508 ms)
7: [ RUN      ] PairUnitConvertTest.gw
19: [       OK ] LibraryCommands.from_list (35 ms)
19: [ RUN      ] LibraryCommands.from_string
16/32 Test #17: ResetIDs .........................   Passed    1.85 sec
test 20
      Start 20: LibraryProperties
20: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/test_library_properties
20: Test timeout computed to be: 1500
7: [       OK ] PairUnitConvertTest.gw (66 ms)
7: [ RUN      ] PairUnitConvertTest.gw_zbl
19: [       OK ] LibraryCommands.from_string (54 ms)
19: [----------] 4 tests from LibraryCommands (384 ms total)
19: 
19: [----------] Global test environment tear-down
19: [==========] 4 tests from 1 test suite ran. (402 ms total)
19: [  PASSED  ] 4 tests.
17/32 Test #19: LibraryCommands ..................   Passed    0.90 sec
test 21
      Start 21: LibraryConfig
21: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/c-library/test_library_config
21: Test timeout computed to be: 1500
7: [       OK ] PairUnitConvertTest.gw_zbl (60 ms)
7: [ RUN      ] PairUnitConvertTest.nb3b_harmonic
7: [       OK ] PairUnitConvertTest.nb3b_harmonic (68 ms)
7: [ RUN      ] PairUnitConvertTest.sw
7: [       OK ] PairUnitConvertTest.sw (69 ms)
7: [ RUN      ] PairUnitConvertTest.table_metal2real
20: [==========] Running 13 tests from 2 test suites.
20: [----------] Global test environment set-up.
20: [----------] 8 tests from LibraryProperties
20: [ RUN      ] LibraryProperties.version
21: [==========] Running 17 tests from 2 test suites.
21: [----------] Global test environment set-up.
21: [----------] 9 tests from LAMMPSConfig
7: [       OK ] PairUnitConvertTest.table_metal2real (342 ms)
7: [ RUN      ] PairUnitConvertTest.table_real2metal
21: [ RUN      ] LAMMPSConfig.package_count
21: [       OK ] LAMMPSConfig.package_count (1 ms)
21: [ RUN      ] LAMMPSConfig.has_package
21: [       OK ] LAMMPSConfig.has_package (1 ms)
21: [ RUN      ] LAMMPSConfig.package_name
21: [       OK ] LAMMPSConfig.package_name (1 ms)
21: [ RUN      ] LAMMPSConfig.exceptions
21: [       OK ] LAMMPSConfig.exceptions (1 ms)
21: [ RUN      ] LAMMPSConfig.mpi_support
21: [       OK ] LAMMPSConfig.mpi_support (0 ms)
21: [ RUN      ] LAMMPSConfig.png_support
21: [       OK ] LAMMPSConfig.png_support (1 ms)
21: [ RUN      ] LAMMPSConfig.jpeg_support
21: [       OK ] LAMMPSConfig.jpeg_support (0 ms)
21: [ RUN      ] LAMMPSConfig.gzip_support
21: [       OK ] LAMMPSConfig.gzip_support (0 ms)
21: [ RUN      ] LAMMPSConfig.ffmpeg_support
21: [       OK ] LAMMPSConfig.ffmpeg_support (0 ms)
21: [----------] 9 tests from LAMMPSConfig (17 ms total)
21: 
21: [----------] 8 tests from LibraryConfig
21: [ RUN      ] LibraryConfig.has_style
20: [       OK ] LibraryProperties.version (241 ms)
20: [ RUN      ] LibraryProperties.memory_usage
21: [       OK ] LibraryConfig.has_style (222 ms)
21: [ RUN      ] LibraryConfig.style_count
20: [       OK ] LibraryProperties.memory_usage (50 ms)
20: [ RUN      ] LibraryProperties.get_mpi_comm
21: [       OK ] LibraryConfig.style_count (44 ms)
21: [ RUN      ] LibraryConfig.style_name
20: [       OK ] LibraryProperties.get_mpi_comm (43 ms)
20: [ RUN      ] LibraryProperties.natoms
7: [       OK ] PairUnitConvertTest.table_real2metal (327 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff
21: [       OK ] LibraryConfig.style_name (38 ms)
21: [ RUN      ] LibraryConfig.has_id
21: [       OK ] LibraryConfig.has_id (44 ms)
21: [ RUN      ] LibraryConfig.id_count
7: [       OK ] PairUnitConvertTest.tersoff (81 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_mod
21: [       OK ] LibraryConfig.id_count (49 ms)
21: [ RUN      ] LibraryConfig.id_name
21: [       OK ] LibraryConfig.id_name (40 ms)
21: [ RUN      ] LibraryConfig.is_running
7: [       OK ] PairUnitConvertTest.tersoff_mod (69 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_mod_c
21: [       OK ] LibraryConfig.is_running (54 ms)
21: [ RUN      ] LibraryConfig.force_timeout
20: [       OK ] LibraryProperties.natoms (222 ms)
20: [ RUN      ] LibraryProperties.thermo
21: [       OK ] LibraryConfig.force_timeout (20 ms)
21: [----------] 8 tests from LibraryConfig (519 ms total)
21: 
21: [----------] Global test environment tear-down
21: [==========] 17 tests from 2 test suites ran. (547 ms total)
21: [  PASSED  ] 17 tests.
7: [       OK ] PairUnitConvertTest.tersoff_mod_c (76 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_table
18/32 Test #21: LibraryConfig ....................   Passed    1.05 sec
test 22
      Start 22: LammpsClass
22: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/test_lammps_class
22: Test timeout computed to be: 1500
20: [       OK ] LibraryProperties.thermo (223 ms)
20: [ RUN      ] LibraryProperties.box
16: [       OK ] KimCommandsTest.kim_param (2510 ms)
16: [ RUN      ] KimCommandsTest.kim_property
20:   1 by 1 by 1 MPI processor grid
20: [       OK ] LibraryProperties.box (106 ms)
20: [ RUN      ] LibraryProperties.setting
20: [       OK ] LibraryProperties.setting (91 ms)
20: [ RUN      ] LibraryProperties.global
20: [       OK ] LibraryProperties.global (86 ms)
20: [----------] 8 tests from LibraryProperties (1069 ms total)
20: 
20: [----------] 5 tests from AtomProperties
20: [ RUN      ] AtomProperties.invalid
20: [       OK ] AtomProperties.invalid (31 ms)
20: [ RUN      ] AtomProperties.mass
20: [       OK ] AtomProperties.mass (38 ms)
20: [ RUN      ] AtomProperties.id
22: Running main() from gmock_main.cc
22: [==========] Running 5 tests from 4 test suites.
22: [----------] Global test environment set-up.
22: [----------] 2 tests from LAMMPS_plain
22: [ RUN      ] LAMMPS_plain.InitMembers
20: [       OK ] AtomProperties.id (24 ms)
20: [ RUN      ] AtomProperties.type
20: [       OK ] AtomProperties.type (46 ms)
20: [ RUN      ] AtomProperties.position
20: [       OK ] AtomProperties.position (24 ms)
20: [----------] 5 tests from AtomProperties (166 ms total)
20: 
20: [----------] Global test environment tear-down
20: [==========] 13 tests from 2 test suites ran. (1251 ms total)
20: [  PASSED  ] 13 tests.
19/32 Test #20: LibraryProperties ................   Passed    1.81 sec
test 23
      Start 23: InputClass
23: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/cplusplus/test_input_class
23: Test timeout computed to be: 1500
22: [       OK ] LAMMPS_plain.InitMembers (235 ms)
22: [ RUN      ] LAMMPS_plain.TestStyles
22: [       OK ] LAMMPS_plain.TestStyles (84 ms)
22: [----------] 2 tests from LAMMPS_plain (321 ms total)
22: 
22: [----------] 1 test from LAMMPS_omp
22: [ RUN      ] LAMMPS_omp.InitMembers
22: [       OK ] LAMMPS_omp.InitMembers (58 ms)
22: [----------] 1 test from LAMMPS_omp (59 ms total)
22: 
22: [----------] 1 test from LAMMPS_kokkos
22: [ RUN      ] LAMMPS_kokkos.InitMembers
22: [  SKIPPED ] LAMMPS_kokkos.InitMembers (2 ms)
22: [----------] 1 test from LAMMPS_kokkos (2 ms total)
22: 
22: [----------] 1 test from LAMMPS_help
22: [ RUN      ] LAMMPS_help.HelpMessage
16: [       OK ] KimCommandsTest.kim_property (790 ms)
16: [----------] 4 tests from KimCommandsTest (4272 ms total)
16: 
16: [----------] Global test environment tear-down
16: [==========] 4 tests from 1 test suite ran. (4285 ms total)
16: [  PASSED  ] 4 tests.
20/32 Test #16: KimCommands ......................   Passed    4.78 sec
test 24
      Start 24: FortranOpen
24: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/test_fortran_create
24: Test timeout computed to be: 1500
21/32 Test #22: LammpsClass ......................   Passed    1.17 sec
test 25
      Start 25: FortranCommands
25: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/fortran/test_fortran_commands
25: Test timeout computed to be: 1500
23: Running main() from /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/src/gtest_main.cc
23: [==========] Running 3 tests from 1 test suite.
23: [----------] Global test environment set-up.
23: [----------] 3 tests from Input_commands
23: [ RUN      ] Input_commands.from_file
23: region       box block 0 $x 0 2 0 2
23: region       box block 0 2 0 2 0 2
23: create_box 1 box
23: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
23:   1 by 1 by 1 MPI processor grid
23: create_atoms 1 single 1.0 1.0 ${zpos}
23: create_atoms 1 single 1.0 1.0 1.5
23: Created 1 atoms
23:   create_atoms CPU = 0.001 seconds
23: create_atoms 1 single 0.2 0.1 0.1
23: Created 1 atoms
23:   create_atoms CPU = 0.007 seconds
23: [       OK ] Input_commands.from_file (252 ms)
23: [ RUN      ] Input_commands.from_line
23: region       box block 0 $x 0 2 0 2
23: region       box block 0 2 0 2 0 2
23: create_box 1 box
23: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
23:   1 by 1 by 1 MPI processor grid
23: create_atoms 1 single 1.0 1.0 ${zpos}
23: create_atoms 1 single 1.0 1.0 1.5
23: Created 1 atoms
23:   create_atoms CPU = 0.000 seconds
23: [       OK ] Input_commands.from_line (142 ms)
23: [ RUN      ] Input_commands.substitute
23: [       OK ] Input_commands.substitute (22 ms)
23: [----------] 3 tests from Input_commands (417 ms total)
23: 
23: [----------] Global test environment tear-down
23: [==========] 3 tests from 1 test suite ran. (422 ms total)
23: [  PASSED  ] 3 tests.
22/32 Test #23: InputClass .......................   Passed    0.96 sec
test 26
      Start 26: PythonPackage
26: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python/test_python_package
26: Environment variables: 
26:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
26:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/serial/unittest/python:/builddir/build/BUILD/lammps-patch_29Oct2020/python:
26: Test timeout computed to be: 1500
24: Running main() from /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/src/gtest_main.cc
24: [==========] Running 4 tests from 2 test suites.
24: [----------] Global test environment set-up.
24: [----------] 2 tests from open_no_mpi
24: [ RUN      ] open_no_mpi.no_args
24: Using a 'void **' argument to return the LAMMPS handle is deprecated.  Please use the return value instead.
25: Running main() from /builddir/build/BUILD/lammps-patch_29Oct2020/serial/gtest-src/googletest/src/gtest_main.cc
25: [==========] Running 4 tests from 1 test suite.
25: [----------] Global test environment set-up.
25: [----------] 4 tests from LAMMPS_commands
25: [ RUN      ] LAMMPS_commands.from_file
25: Using a 'void **' argument to return the LAMMPS handle is deprecated.  Please use the return value instead.
24: [       OK ] open_no_mpi.no_args (246 ms)
24: [ RUN      ] open_no_mpi.with_args
24: [       OK ] open_no_mpi.with_args (65 ms)
24: [----------] 2 tests from open_no_mpi (317 ms total)
24: 
24: [----------] 2 tests from fortran_open
24: [ RUN      ] fortran_open.no_args
24: [       OK ] fortran_open.no_args (35 ms)
24: [ RUN      ] fortran_open.with_args
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.001 seconds
25: create_atoms 1 single  0.2 0.1 0.1
25: Created 1 atoms
25:   create_atoms CPU = 0.007 seconds
25: [       OK ] LAMMPS_commands.from_file (283 ms)
25: [ RUN      ] LAMMPS_commands.from_line
24: [       OK ] fortran_open.with_args (66 ms)
24: [----------] 2 tests from fortran_open (103 ms total)
24: 
24: [----------] Global test environment tear-down
24: [==========] 4 tests from 2 test suites ran. (429 ms total)
24: [  PASSED  ] 4 tests.
23/32 Test #24: FortranOpen ......................   Passed    1.02 sec
test 27
      Start 27: PythonOpen
27: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-open.py" "-v"
27: Environment variables: 
27:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
27:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/serial:
27:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeCache.txt
27: Test timeout computed to be: 1500
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.000 seconds
25: [       OK ] LAMMPS_commands.from_line (66 ms)
25: [ RUN      ] LAMMPS_commands.from_list
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.000 seconds
25: create_atoms 1 single    0.2 0.1 0.1
25: Created 1 atoms
25:   create_atoms CPU = 0.006 seconds
25: [       OK ] LAMMPS_commands.from_list (28 ms)
25: [ RUN      ] LAMMPS_commands.from_string
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.000 seconds
25: create_atoms 1 single    0.2 0.1 0.1
25: Created 1 atoms
25:   create_atoms CPU = 0.005 seconds
25: [       OK ] LAMMPS_commands.from_string (67 ms)
25: [----------] 4 tests from LAMMPS_commands (446 ms total)
25: 
25: [----------] Global test environment tear-down
25: [==========] 4 tests from 1 test suite ran. (451 ms total)
25: [  PASSED  ] 4 tests.
24/32 Test #25: FortranCommands ..................   Passed    1.06 sec
test 28
      Start 28: PythonCommands
28: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-commands.py" "-v"
28: Environment variables: 
28:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
28:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/serial:
28:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeCache.txt
28: Test timeout computed to be: 1500
26: [==========] Running 2 tests from 1 test suite.
26: [----------] Global test environment set-up.
26: [----------] 2 tests from PythonPackageTest
26: [ RUN      ] PythonPackageTest.python_invoke
26: [  SKIPPED ] PythonPackageTest.python_invoke (236 ms)
26: [ RUN      ] PythonPackageTest.python_variable
26: [  SKIPPED ] PythonPackageTest.python_variable (67 ms)
26: [----------] 2 tests from PythonPackageTest (305 ms total)
26: 
26: [----------] Global test environment tear-down
26: [==========] 2 tests from 1 test suite ran. (333 ms total)
26: [  PASSED  ] 0 tests.
26: [  SKIPPED ] 2 tests, listed below:
26: [  SKIPPED ] PythonPackageTest.python_invoke
26: [  SKIPPED ] PythonPackageTest.python_variable
25/32 Test #26: PythonPackage ....................   Passed    1.10 sec
test 29
      Start 29: PythonNumpy
29: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-numpy.py" "-v"
29: Environment variables: 
29:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
29:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/serial:
29:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeCache.txt
29: Test timeout computed to be: 1500
28: testCommand (__main__.PythonCommand)
27: LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: Total wall time: 0:00:00
28: Test executing individual commands ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.001 seconds
28: ok
28: Total wall time: 0:00:00
28: testCommandsList (__main__.PythonCommand)
29: testExtractAtom (__main__.PythonNumpy) ... skipped 'numpy is not available'
27: testNoArgs (__main__.PythonOpen)
29: testExtractAtomDeprecated (__main__.PythonNumpy) ... skipped 'numpy is not available'
28: Test executing commands from list of strings ... LAMMPS (29 Oct 2020)
29: testExtractComputeGlobalArray (__main__.PythonNumpy) ... skipped 'numpy is not available'
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
29: testExtractComputeGlobalScalar (__main__.PythonNumpy) ... skipped 'numpy is not available'
28: 
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.000 seconds
28: create_atoms 1 single               0.2 0.1 0.1
28: Created 1 atoms
28:   create_atoms CPU = 0.001 seconds
28: ok
28: Total wall time: 0:00:00
28: testCommandsString (__main__.PythonCommand)
29: testExtractComputeGlobalVector (__main__.PythonNumpy) ... skipped 'numpy is not available'
27: Create LAMMPS instance without any arguments ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
29: testExtractComputeLocalArray (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeLocalScalar (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeLocalVector (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputePerAtomArray (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputePerAtomVector (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testLammpsPointer (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testNeighborList (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: 
29: ----------------------------------------------------------------------
27: Total wall time: 0:00:00
29: Ran 12 tests in 0.081s
29: 
29: OK (skipped=12)
27: ok
27: testUnknownCommand (__main__.PythonOpen) ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
28: Test executing block of commands from string ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: 
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
27: ERROR: Unknown command: write_paper (src/input.cpp:353)
27: Last command: write_paper
28: Created 1 atoms
28:   create_atoms CPU = 0.000 seconds
28: 
28: create_atoms 1 single               0.2 0.1 0.1
28: Created 1 atoms
28:   create_atoms CPU = 0.002 seconds
28: ok
28: Total wall time: 0:00:00
28: testFile (__main__.PythonCommand)
27: Total wall time: 0:00:00
27: ok
27: testUnknownCommandInList (__main__.PythonOpen) ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
28: Test reading commands from a file ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
27: ERROR: Unknown command: write_paper (src/input.cpp:353)
27: Last command: write_paper
27: Total wall time: 0:00:00
27: ok
27: testWithArgs (__main__.PythonOpen)
26/32 Test #29: PythonNumpy ......................   Passed    2.81 sec
test 30
      Start 30: PythonCapabilities
30: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-capabilities.py" "-v"
30: Environment variables: 
30:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
30:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/serial:
30:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeCache.txt
30: Test timeout computed to be: 1500
28: 
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.000 seconds
28: 
28: create_atoms 1 single             0.2 0.1 0.1
28: Created 1 atoms
28:   create_atoms CPU = 0.002 seconds
28: ok
28: Total wall time: 0:00:00
28: testNeighborList (__main__.PythonCommand) ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: units lj
28: atom_style atomic
28: atom_modify map array
28: boundary f f f
28: region box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: mass 1 1.0
28: velocity all create 3.0 87287
28: pair_style lj/cut 2.5
28: pair_coeff 1 1 1.0 1.0 2.5
27: Create LAMMPS instance with a few arguments ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
28: neighbor 0.1 bin
28: neigh_modify every 20 delay 0 check no
28: run 0
28: WARNING: No fixes defined, atoms won't move (src/verlet.cpp:54)
27: Total wall time: 0:00:00
27: ok
27: testWithMPI (__main__.PythonOpen) ... skipped 'Skipping MPI test since LAMMPS is not parallel or mpi4py is not found'
27: 
27: ----------------------------------------------------------------------
27: Ran 5 tests in 0.375s
27: 
27: OK (skipped=1)
28: Neighbor list info ...
28:   update every 20 steps, delay 0 steps, check no
28:   max neighbors/atom: 2000, page size: 100000
28:   master list distance cutoff = 2.6
28:   ghost atom cutoff = 2.6
28:   binsize = 1.3, bins = 2 2 2
28:   1 neighbor lists, perpetual/occasional/extra = 1 0 0
28:   (1) pair lj/cut, perpetual
28:       attributes: half, newton on
28:       pair build: half/bin/atomonly/newton
28:       stencil: half/bin/3d/newton
28:       bin: standard
28: Setting up Verlet run ...
28:   Unit style    : lj
28:   Current step  : 0
28:   Time step     : 0.005
28: Per MPI rank memory allocation (min/avg/max) = 2.413 | 2.413 | 2.413 Mbytes
28: Step Temp E_pair E_mol TotEng Press 
28:        0            3         8064            0      8066.25     8128.375 
28: Loop time of 0.000263929 on 1 procs for 0 steps with 2 atoms
28: 
28: 106.1% CPU use with 1 MPI tasks x 1 OpenMP threads
28: 
28: MPI task timing breakdown:
28: Section |  min time  |  avg time  |  max time  |%varavg| %total
28: ---------------------------------------------------------------
28: Pair    | 0          | 0          | 0          |   0.0 |  0.00
28: Neigh   | 0          | 0          | 0          |   0.0 |  0.00
28: Comm    | 0          | 0          | 0          |   0.0 |  0.00
28: Output  | 0          | 0          | 0          |   0.0 |  0.00
28: Modify  | 0          | 0          | 0          |   0.0 |  0.00
28: Other   |            | 0.0002639  |            |       |100.00
28: 
28: Nlocal:        2.00000 ave           2 max           2 min
28: Histogram: 1 0 0 0 0 0 0 0 0 0
28: Nghost:        0.00000 ave           0 max           0 min
28: Histogram: 1 0 0 0 0 0 0 0 0 0
28: Neighs:        1.00000 ave           1 max           1 min
28: Histogram: 1 0 0 0 0 0 0 0 0 0
28: 
28: Total # of neighbors = 1
28: Ave neighs/atom = 0.5
28: Neighbor list builds = 0
28: Dangerous builds not checked
28: ok
28: Total wall time: 0:00:00
28: testNoFile (__main__.PythonCommand)
28: Test (not) reading commands from no file ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: ok
28: Total wall time: 0:00:00
28: 
28: ----------------------------------------------------------------------
28: Ran 6 tests in 1.069s
28: 
28: OK
27/32 Test #27: PythonOpen .......................   Passed    3.77 sec
test 31
      Start 31: PythonPyLammps
31: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-pylammps.py" "-v"
31: Environment variables: 
31:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
31:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/serial:
31:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/serial/CMakeCache.txt
31: Test timeout computed to be: 1500
28/32 Test #28: PythonCommands ...................   Passed    3.71 sec
test 32
      Start 32: LammpsShell
32: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/tools/test_lammps_shell.py" "-v"
32: Test timeout computed to be: 1500
32: testExpandAngleStyle (__main__.LammpsShell)
30: test_available_id (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: fix charge all property/atom q ghost yes
30: region box block 0 1 0 1 0 1
30: create_box 1 box
30: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (1.0000000 1.0000000 1.0000000)
30:   1 by 1 by 1 MPI processor grid
30: group none empty
30: 0 atoms in group none
30: variable test index 1
30: Total wall time: 0:00:00
30: ok
30: test_available_styles (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
31: test_create_atoms (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_force_timeout (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
30: region box block 0 1 0 1 0 1
30: create_box 1 box
30: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (1.0000000 1.0000000 1.0000000)
30:   1 by 1 by 1 MPI processor grid
30: mass * 1.0
30: run 10
30: WARNING: No fixes defined, atoms won't move (src/verlet.cpp:54)
30: Setting up Verlet run ...
30:   Unit style    : lj
30:   Current step  : 0
30:   Time step     : 0.005
30: WARNING: No pairwise cutoff or binsize set. Atom sorting therefore disabled. (src/atom.cpp:2115)
30: WARNING: Communication cutoff is 0.0. No ghost atoms will be generated. Atoms may get lost. (src/comm_brick.cpp:167)
30: Per MPI rank memory allocation (min/avg/max) = 0.04702 | 0.04702 | 0.04702 Mbytes
30: Step Temp E_pair E_mol TotEng Press 
30:        0            0            0            0            0            0 
30:       10            0            0            0            0            0 
30: Loop time of 0.00334096 on 1 procs for 10 steps with 0 atoms
30: 
30: Performance: 1293041.696 tau/day, 2993.152 timesteps/s
30: 100.1% CPU use with 1 MPI tasks x 1 OpenMP threads
30: 
30: MPI task timing breakdown:
30: Section |  min time  |  avg time  |  max time  |%varavg| %total
30: ---------------------------------------------------------------
30: Pair    | 0          | 0          | 0          |   0.0 |  0.00
30: Neigh   | 0          | 0          | 0          |   0.0 |  0.00
30: Comm    | 0.00074315 | 0.00074315 | 0.00074315 |   0.0 | 22.24
30: Output  | 0.00044394 | 0.00044394 | 0.00044394 |   0.0 | 13.29
30: Modify  | 0.00060892 | 0.00060892 | 0.00060892 |   0.0 | 18.23
30: Other   |            | 0.001545   |            |       | 46.24
30: 
30: Nlocal:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Nghost:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Neighs:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: 
30: Total # of neighbors = 0
30: Neighbor list builds = 0
30: Dangerous builds = 0
30: run 10
30: timer timeout off
30: New timer settings: style=normal  mode=nosync  timeout=off
30: run 10
30: WARNING: No fixes defined, atoms won't move (src/verlet.cpp:54)
30: Setting up Verlet run ...
30:   Unit style    : lj
30:   Current step  : 10
30:   Time step     : 0.005
30: WARNING: Communication cutoff is 0.0. No ghost atoms will be generated. Atoms may get lost. (src/comm_brick.cpp:167)
30: Per MPI rank memory allocation (min/avg/max) = 0.04702 | 0.04702 | 0.04702 Mbytes
30: Step Temp E_pair E_mol TotEng Press 
30:       10            0            0            0            0            0 
30:       20            0            0            0            0            0 
30: Loop time of 0.0130069 on 1 procs for 10 steps with 0 atoms
30: 
30: Performance: 332130.754 tau/day, 768.821 timesteps/s
30: 0.0% CPU use with 1 MPI tasks x 1 OpenMP threads
30: 
30: MPI task timing breakdown:
30: Section |  min time  |  avg time  |  max time  |%varavg| %total
30: ---------------------------------------------------------------
30: Pair    | 0          | 0          | 0          |   0.0 |  0.00
30: Neigh   | 0          | 0          | 0          |   0.0 |  0.00
30: Comm    | 0.00052214 | 0.00052214 | 0.00052214 |   0.0 |  4.01
30: Output  | 0.010922   | 0.010922   | 0.010922   |   0.0 | 83.97
30: Modify  | 0.00058055 | 0.00058055 | 0.00058055 |   0.0 |  4.46
30: Other   |            | 0.0009823  |            |       |  7.55
30: 
30: Nlocal:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Nghost:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Neighs:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: 
30: Total # of neighbors = 0
30: Neighbor list builds = 0
30: Dangerous builds = 0
30: Total wall time: 0:00:00
30: ok
32: Test expansion of a angle style ... ok
32: testExpandBondStyle (__main__.LammpsShell)
30: test_has_ffmpeg_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
31: Total wall time: 0:00:00
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31: ok
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
31: test_runs (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
30: test_has_gzip_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_has_id (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: fix charge all property/atom q ghost yes
30: region box block 0 1 0 1 0 1
30: create_box 1 box
30: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (1.0000000 1.0000000 1.0000000)
30:   1 by 1 by 1 MPI processor grid
30: group none empty
30: 0 atoms in group none
30: variable test index 1
30: Total wall time: 0:00:00
30: ok
30: test_has_jpeg_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_has_png_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
31: Total wall time: 0:00:00
31: ok
30: Total wall time: 0:00:00
31: test_version (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
30: ok
31: LAMMPS output is captured by PyLammps wrapper
31: Total wall time: 0:00:00
31: ok
31: test_write_script (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
30: test_has_style (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
31: Total wall time: 0:00:00
31: ok
31: 
31: ----------------------------------------------------------------------
31: Ran 4 tests in 1.505s
31: 
31: OK
30: Total wall time: 0:00:00
29/32 Test #31: PythonPyLammps ...................   Passed    3.46 sec
30: ok
30: test_installed_packages (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_is_running (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
32: Test expansion of a bond style ... ok
32: testExpandClearHistory (__main__.LammpsShell)
30: Total wall time: 0:00:00
30: ok
30: test_version (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: 
30: ----------------------------------------------------------------------
30: Ran 12 tests in 2.402s
30: 
30: OK
30/32 Test #30: PythonCapabilities ...............   Passed    4.33 sec
32: Test expansion of a shell specific command ... ok
32: testExpandComputeGroup (__main__.LammpsShell)
32: Test expansion of a group-ID and a compute command ... ok
32: testExpandDihedralStyle (__main__.LammpsShell)
32: Test expansion of a dihedral style ... ok
32: testExpandDimension (__main__.LammpsShell)
32: Test expansion of a LAMMPS command ... ok
32: testExpandFixGroup (__main__.LammpsShell)
32: Test expansion of a group-ID and a fix command ... ok
32: testExpandImproperStyle (__main__.LammpsShell)
32: Test expansion of a improper style ... ok
32: testExpandPairStyle (__main__.LammpsShell)
32: Test expansion of a pair style ... ok
32: testExpandSource (__main__.LammpsShell)
32: Test expansion of a shell command and a file name ... ok
32: testHistory (__main__.LammpsShell)
32: Test history expansion ... ok
32: 
32: ----------------------------------------------------------------------
32: Ran 11 tests in 9.757s
32: 
32: OK
31/32 Test #32: LammpsShell ......................   Passed   11.36 sec
7: [       OK ] PairUnitConvertTest.tersoff_table (65757 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_zbl
7: [       OK ] PairUnitConvertTest.tersoff_zbl (144 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_zbl_omp
7: [       OK ] PairUnitConvertTest.tersoff_zbl_omp (180 ms)
7: [ RUN      ] PairUnitConvertTest.vashishta
7: [       OK ] PairUnitConvertTest.vashishta (101 ms)
7: [----------] 20 tests from PairUnitConvertTest (75624 ms total)
7: 
7: [----------] Global test environment tear-down
7: [==========] 20 tests from 1 test suite ran. (75658 ms total)
7: [  PASSED  ] 20 tests.
32/32 Test  #7: PairUnitConvert ..................   Passed   76.19 sec
100% tests passed, 0 tests failed out of 32
Total Test time (real) =  78.30 sec
+ cd -
/builddir/build/BUILD/lammps-patch_29Oct2020
+ test -n ''
+ for mpi in '' mpich openmpi
+ old_PYTHONPATH=
+ test -n mpich
+ module load mpi/mpich-riscv64
++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/mpich-riscv64
+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/mpich/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-riscv64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/mpich-riscv64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/mpich-riscv64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/mpich-riscv64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' '__LMOD_REF_COUNT_MODULEPATH=/etc/modulefiles:1\;/usr/share/modulefiles:1\;/usr/share/modulefiles/Linux:1\;/usr/share/modulefiles/Core:1\;/usr/share/lmod/lmod/modulefiles/Core:1;' export '__LMOD_REF_COUNT_MODULEPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/mpich/bin;' export 'MPI_BIN;' 'MPI_COMPILER=mpich-riscv64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/mpich;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/mpich-riscv64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/mpich/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/mpich-riscv64;' export 'MPI_MAN;' 'MPI_PYTHON2_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON2_SITEARCH;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_PYTHON_SITEARCH=%\{python2_sitearch\}/mpich;' export 'MPI_PYTHON_SITEARCH;' 'MPI_SUFFIX=_mpich;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/mpich-riscv64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/mpich/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-riscv64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/mpich-riscv64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=b2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/mpich/lib:1
++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
++ LD_LIBRARY_PATH=/usr/lib64/mpich/lib
++ export LD_LIBRARY_PATH
++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/mpich-riscv64:1
++ export __LMOD_REF_COUNT_LOADEDMODULES
++ LOADEDMODULES=mpi/mpich-riscv64
++ export LOADEDMODULES
++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/mpich-riscv64:1;/usr/share/lmod/lmod/share/man:1'
++ export __LMOD_REF_COUNT_MANPATH
++ MANPATH=:/usr/share/man/mpich-riscv64:/usr/share/lmod/lmod/share/man
++ export MANPATH
++ __LMOD_REF_COUNT_MODULEPATH='/etc/modulefiles:1;/usr/share/modulefiles:1;/usr/share/modulefiles/Linux:1;/usr/share/modulefiles/Core:1;/usr/share/lmod/lmod/modulefiles/Core:1'
++ export __LMOD_REF_COUNT_MODULEPATH
++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
++ export MODULEPATH
++ MPI_BIN=/usr/lib64/mpich/bin
++ export MPI_BIN
++ MPI_COMPILER=mpich-riscv64
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/mpich
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/mpich
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/mpich-riscv64
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/mpich/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/mpich-riscv64
++ export MPI_MAN
++ MPI_PYTHON2_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON2_SITEARCH
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/mpich
++ export MPI_PYTHON3_SITEARCH
++ MPI_PYTHON_SITEARCH='%{python2_sitearch}/mpich'
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_mpich
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/mpich-riscv64
++ export MPI_SYSCONFIG
++ __LMOD_REF_COUNT_PATH='/usr/lib64/mpich/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
++ export __LMOD_REF_COUNT_PATH
++ PATH=/usr/lib64/mpich/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/mpich/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
++ PKG_CONFIG_PATH=/usr/lib64/mpich/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/mpich-riscv64:1
++ export __LMOD_REF_COUNT__LMFILES_
++ _LMFILES_=/usr/share/modulefiles/mpi/mpich-riscv64
++ export _LMFILES_
++ _ModuleTable001_=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
++ export _ModuleTable001_
++ _ModuleTable002_=b2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
++ export _ModuleTable002_
++ _ModuleTable_Sz_=2
++ export _ModuleTable_Sz_
+ export PYTHONPATH=/usr/lib64/python3.9/site-packages/mpich:
+ PYTHONPATH=/usr/lib64/python3.9/site-packages/mpich:
+ cd mpich
+ /usr/bin/ctest --output-on-failure --force-new-ctest-process -j4 --verbose
UpdateCTestConfiguration  from :/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/DartConfiguration.tcl
Parse Config file:/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/DartConfiguration.tcl
UpdateCTestConfiguration  from :/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/DartConfiguration.tcl
Parse Config file:/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/DartConfiguration.tcl
Test project /builddir/build/BUILD/lammps-patch_29Oct2020/mpich
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
      Start  1: Tokenizer
1: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/test_tokenizer
1: Test timeout computed to be: 1500
test 2
      Start  2: MemPool
2: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/test_mempool
2: Test timeout computed to be: 1500
test 3
      Start  3: Utils
3: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/test_utils
3: Environment variables: 
3:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
3: Test timeout computed to be: 1500
test 4
      Start  4: FmtLib
4: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/test_fmtlib
4: Test timeout computed to be: 1500
2: Running main() from gmock_main.cc
2: [==========] Running 5 tests from 2 test suites.
2: [----------] Global test environment set-up.
2: [----------] 3 tests from MyPage
2: [ RUN      ] MyPage.int
1: Running main() from gmock_main.cc
1: [==========] Running 22 tests from 2 test suites.
1: [----------] Global test environment set-up.
1: [----------] 12 tests from Tokenizer
1: [ RUN      ] Tokenizer.empty_string
4: Running main() from gmock_main.cc
4: [==========] Running 13 tests from 1 test suite.
4: [----------] Global test environment set-up.
4: [----------] 13 tests from FmtLib
4: [ RUN      ] FmtLib.insert_string
2: [       OK ] MyPage.int (17 ms)
2: [ RUN      ] MyPage.double
2: [       OK ] MyPage.double (2 ms)
2: [ RUN      ] MyPage.bigint
1: [       OK ] Tokenizer.empty_string (19 ms)
1: [ RUN      ] Tokenizer.whitespace_only
1: [       OK ] Tokenizer.whitespace_only (1 ms)
1: [ RUN      ] Tokenizer.single_word
2: [       OK ] MyPage.bigint (3 ms)
2: [----------] 3 tests from MyPage (24 ms total)
2: 
1: [       OK ] Tokenizer.single_word (0 ms)
1: [ RUN      ] Tokenizer.two_words
1: [       OK ] Tokenizer.two_words (0 ms)
1: [ RUN      ] Tokenizer.prefix_separators
1: [       OK ] Tokenizer.prefix_separators (0 ms)
1: [ RUN      ] Tokenizer.postfix_separators
1: [       OK ] Tokenizer.postfix_separators (0 ms)
1: [ RUN      ] Tokenizer.iterate_words
1: [       OK ] Tokenizer.iterate_words (1 ms)
1: [ RUN      ] Tokenizer.no_separator_path
1: [       OK ] Tokenizer.no_separator_path (1 ms)
1: [ RUN      ] Tokenizer.unix_paths
1: [       OK ] Tokenizer.unix_paths (1 ms)
1: [ RUN      ] Tokenizer.windows_paths
1: [       OK ] Tokenizer.windows_paths (0 ms)
1: [ RUN      ] Tokenizer.default_separators
1: [       OK ] Tokenizer.default_separators (0 ms)
1: [ RUN      ] Tokenizer.as_vector
1: [       OK ] Tokenizer.as_vector (1 ms)
1: [----------] 12 tests from Tokenizer (30 ms total)
1: 
1: [----------] 10 tests from ValueTokenizer
1: [ RUN      ] ValueTokenizer.empty_string
1: [       OK ] ValueTokenizer.empty_string (0 ms)
1: [ RUN      ] ValueTokenizer.bad_integer
4: [       OK ] FmtLib.insert_string (15 ms)
4: [ RUN      ] FmtLib.insert_int
4: [       OK ] FmtLib.insert_int (1 ms)
4: [ RUN      ] FmtLib.insert_neg_int
4: [       OK ] FmtLib.insert_neg_int (0 ms)
4: [ RUN      ] FmtLib.insert_bigint
4: [       OK ] FmtLib.insert_bigint (1 ms)
4: [ RUN      ] FmtLib.insert_neg_bigint
4: [       OK ] FmtLib.insert_neg_bigint (0 ms)
4: [ RUN      ] FmtLib.insert_tagint
4: [  SKIPPED ] FmtLib.insert_tagint (2 ms)
4: [ RUN      ] FmtLib.insert_neg_tagint
4: [  SKIPPED ] FmtLib.insert_neg_tagint (1 ms)
4: [ RUN      ] FmtLib.insert_imageint
4: [  SKIPPED ] FmtLib.insert_imageint (0 ms)
4: [ RUN      ] FmtLib.insert_neg_imageint
4: [  SKIPPED ] FmtLib.insert_neg_imageint (0 ms)
4: [ RUN      ] FmtLib.insert_double
4: [       OK ] FmtLib.insert_double (3 ms)
4: [ RUN      ] FmtLib.insert_neg_double
4: [       OK ] FmtLib.insert_neg_double (0 ms)
4: [ RUN      ] FmtLib.int_for_double
3: Running main() from gmock_main.cc
3: [==========] Running 82 tests from 1 test suite.
3: [----------] Global test environment set-up.
3: [----------] 82 tests from Utils
3: [ RUN      ] Utils.trim
3: [       OK ] Utils.trim (3 ms)
3: [ RUN      ] Utils.trim_comment
3: [       OK ] Utils.trim_comment (1 ms)
3: [ RUN      ] Utils.count_words
3: [       OK ] Utils.count_words (0 ms)
3: [ RUN      ] Utils.count_words_string
3: [       OK ] Utils.count_words_string (0 ms)
3: [ RUN      ] Utils.count_words_non_default
3: [       OK ] Utils.count_words_non_default (0 ms)
3: [ RUN      ] Utils.trim_and_count_words
3: [       OK ] Utils.trim_and_count_words (0 ms)
3: [ RUN      ] Utils.count_words_with_extra_spaces
3: [       OK ] Utils.count_words_with_extra_spaces (1 ms)
3: [ RUN      ] Utils.split_words_simple
3: [       OK ] Utils.split_words_simple (1 ms)
3: [ RUN      ] Utils.split_words_quoted
3: [       OK ] Utils.split_words_quoted (1 ms)
3: [ RUN      ] Utils.split_words_escaped
3: [       OK ] Utils.split_words_escaped (1 ms)
3: [ RUN      ] Utils.split_words_quote_in_quoted
3: [       OK ] Utils.split_words_quote_in_quoted (0 ms)
3: [ RUN      ] Utils.valid_integer1
3: [       OK ] Utils.valid_integer1 (0 ms)
3: [ RUN      ] Utils.valid_integer2
3: [       OK ] Utils.valid_integer2 (0 ms)
3: [ RUN      ] Utils.valid_integer3
3: [       OK ] Utils.valid_integer3 (0 ms)
3: [ RUN      ] Utils.valid_double1
3: [       OK ] Utils.valid_double1 (0 ms)
3: [ RUN      ] Utils.valid_double2
3: [       OK ] Utils.valid_double2 (0 ms)
3: [ RUN      ] Utils.valid_double3
3: [       OK ] Utils.valid_double3 (0 ms)
3: [ RUN      ] Utils.valid_double4
3: [       OK ] Utils.valid_double4 (0 ms)
3: [ RUN      ] Utils.valid_double5
3: [       OK ] Utils.valid_double5 (0 ms)
3: [ RUN      ] Utils.valid_double6
3: [       OK ] Utils.valid_double6 (0 ms)
3: [ RUN      ] Utils.valid_double7
3: [       OK ] Utils.valid_double7 (0 ms)
3: [ RUN      ] Utils.valid_double8
3: [       OK ] Utils.valid_double8 (0 ms)
3: [ RUN      ] Utils.valid_double9
3: [       OK ] Utils.valid_double9 (0 ms)
3: [ RUN      ] Utils.empty_not_an_integer
3: [       OK ] Utils.empty_not_an_integer (0 ms)
3: [ RUN      ] Utils.empty_not_a_double
3: [       OK ] Utils.empty_not_a_double (0 ms)
3: [ RUN      ] Utils.text_not_an_integer
3: [       OK ] Utils.text_not_an_integer (0 ms)
3: [ RUN      ] Utils.text_not_a_double
3: [       OK ] Utils.text_not_a_double (1 ms)
3: [ RUN      ] Utils.double_not_an_integer1
3: [       OK ] Utils.double_not_an_integer1 (0 ms)
3: [ RUN      ] Utils.double_not_an_integer2
3: [       OK ] Utils.double_not_an_integer2 (0 ms)
3: [ RUN      ] Utils.double_not_an_integer3
3: [       OK ] Utils.double_not_an_integer3 (1 ms)
3: [ RUN      ] Utils.integer_is_double1
3: [       OK ] Utils.integer_is_double1 (0 ms)
3: [ RUN      ] Utils.integer_is_double2
3: [       OK ] Utils.integer_is_double2 (1 ms)
3: [ RUN      ] Utils.is_double_with_exponential
3: [       OK ] Utils.is_double_with_exponential (0 ms)
3: [ RUN      ] Utils.is_double_with_neg_exponential
3: [       OK ] Utils.is_double_with_neg_exponential (1 ms)
3: [ RUN      ] Utils.is_double_with_pos_exponential
3: [       OK ] Utils.is_double_with_pos_exponential (0 ms)
3: [ RUN      ] Utils.signed_double_and_exponential
3: [       OK ] Utils.signed_double_and_exponential (0 ms)
3: [ RUN      ] Utils.is_double_with_d_exponential
3: [       OK ] Utils.is_double_with_d_exponential (0 ms)
3: [ RUN      ] Utils.is_double_with_neg_d_exponential
3: [       OK ] Utils.is_double_with_neg_d_exponential (0 ms)
3: [ RUN      ] Utils.signed_double_and_d_exponential
3: [       OK ] Utils.signed_double_and_d_exponential (0 ms)
3: [ RUN      ] Utils.strmatch_beg
3: [       OK ] Utils.strmatch_beg (1 ms)
3: [ RUN      ] Utils.strmatch_mid1
3: [       OK ] Utils.strmatch_mid1 (0 ms)
3: [ RUN      ] Utils.strmatch_mid2
3: [       OK ] Utils.strmatch_mid2 (1 ms)
3: [ RUN      ] Utils.strmatch_end
3: [       OK ] Utils.strmatch_end (0 ms)
3: [ RUN      ] Utils.no_strmatch_beg
1: [       OK ] ValueTokenizer.bad_integer (33 ms)
1: [ RUN      ] ValueTokenizer.bad_double
1: [       OK ] ValueTokenizer.bad_double (2 ms)
1: [ RUN      ] ValueTokenizer.valid_int
1: [       OK ] ValueTokenizer.valid_int (1 ms)
1: [ RUN      ] ValueTokenizer.valid_tagint
1: [       OK ] ValueTokenizer.valid_tagint (1 ms)
1: [ RUN      ] ValueTokenizer.valid_bigint
1: [       OK ] ValueTokenizer.valid_bigint (0 ms)
1: [ RUN      ] ValueTokenizer.valid_double
1: [       OK ] ValueTokenizer.valid_double (2 ms)
1: [ RUN      ] ValueTokenizer.valid_double_with_exponential
1: [       OK ] ValueTokenizer.valid_double_with_exponential (1 ms)
1: [ RUN      ] ValueTokenizer.contains
1: [       OK ] ValueTokenizer.contains (4 ms)
1: [ RUN      ] ValueTokenizer.not_contains
1: [       OK ] ValueTokenizer.not_contains (1 ms)
1: [----------] 10 tests from ValueTokenizer (47 ms total)
1: 
1: [----------] Global test environment tear-down
1: [==========] 22 tests from 2 test suites ran. (83 ms total)
1: [  PASSED  ] 22 tests.
3: [       OK ] Utils.no_strmatch_beg (1 ms)
3: [ RUN      ] Utils.no_strmatch_mid
3: [       OK ] Utils.no_strmatch_mid (0 ms)
3: [ RUN      ] Utils.no_strmatch_end
3: [       OK ] Utils.no_strmatch_end (0 ms)
3: [ RUN      ] Utils.strmatch_whole_line
3: [       OK ] Utils.strmatch_whole_line (0 ms)
3: [ RUN      ] Utils.no_strmatch_whole_line
3: [       OK ] Utils.no_strmatch_whole_line (0 ms)
3: [ RUN      ] Utils.strmatch_integer_in_line
3: [       OK ] Utils.strmatch_integer_in_line (0 ms)
3: [ RUN      ] Utils.strmatch_float_in_line
3: [       OK ] Utils.strmatch_float_in_line (0 ms)
3: [ RUN      ] Utils.strmatch_int_as_float_in_line
3: [       OK ] Utils.strmatch_int_as_float_in_line (0 ms)
3: [ RUN      ] Utils.strmatch_char_range
3: [       OK ] Utils.strmatch_char_range (1 ms)
3: [ RUN      ] Utils.strmatch_notchar_range
3: [       OK ] Utils.strmatch_notchar_range (0 ms)
3: [ RUN      ] Utils.strmatch_backslash
3: [       OK ] Utils.strmatch_backslash (0 ms)
3: [ RUN      ] Utils.strmatch_opt_range
3: [       OK ] Utils.strmatch_opt_range (0 ms)
3: [ RUN      ] Utils.strmatch_opt_char
3: [       OK ] Utils.strmatch_opt_char (0 ms)
3: [ RUN      ] Utils.strmatch_dot
3: [       OK ] Utils.strmatch_dot (1 ms)
3: [ RUN      ] Utils.strmatch_digit_nondigit
3: [       OK ] Utils.strmatch_digit_nondigit (0 ms)
3: [ RUN      ] Utils.strmatch_integer_noninteger
3: [       OK ] Utils.strmatch_integer_noninteger (1 ms)
3: [ RUN      ] Utils.strmatch_float_nonfloat
3: [       OK ] Utils.strmatch_float_nonfloat (0 ms)
3: [ RUN      ] Utils.strmatch_whitespace_nonwhitespace
3: [       OK ] Utils.strmatch_whitespace_nonwhitespace (1 ms)
3: [ RUN      ] Utils.bounds_case1
3: [       OK ] Utils.bounds_case1 (1 ms)
3: [ RUN      ] Utils.bounds_case2
3: [       OK ] Utils.bounds_case2 (1 ms)
3: [ RUN      ] Utils.bounds_case3
3: [       OK ] Utils.bounds_case3 (0 ms)
3: [ RUN      ] Utils.bounds_case4
3: [       OK ] Utils.bounds_case4 (1 ms)
3: [ RUN      ] Utils.bounds_case5
3: [       OK ] Utils.bounds_case5 (0 ms)
3: [ RUN      ] Utils.boundsbig_case1
3: [       OK ] Utils.boundsbig_case1 (0 ms)
3: [ RUN      ] Utils.boundsbig_case2
3: [       OK ] Utils.boundsbig_case2 (1 ms)
3: [ RUN      ] Utils.boundsbig_case3
3: [       OK ] Utils.boundsbig_case3 (1 ms)
3: [ RUN      ] Utils.boundsbig_case4
3: [       OK ] Utils.boundsbig_case4 (0 ms)
3: [ RUN      ] Utils.boundsbig_case5
3: [       OK ] Utils.boundsbig_case5 (1 ms)
3: [ RUN      ] Utils.guesspath
3: [       OK ] Utils.guesspath (5 ms)
3: [ RUN      ] Utils.path_join
3: [       OK ] Utils.path_join (1 ms)
3: [ RUN      ] Utils.path_basename
3: [       OK ] Utils.path_basename (3 ms)
3: [ RUN      ] Utils.path_dirname
3: [       OK ] Utils.path_dirname (1 ms)
3: [ RUN      ] Utils.getsyserror
3: [       OK ] Utils.getsyserror (1 ms)
3: [ RUN      ] Utils.potential_file
2: [----------] 2 tests from MyPoolChunk
2: [ RUN      ] MyPoolChunk.int
2: [       OK ] MyPoolChunk.int (3 ms)
2: [ RUN      ] MyPoolChunk.double
2: [       OK ] MyPoolChunk.double (2 ms)
2: [----------] 2 tests from MyPoolChunk (8 ms total)
2: 
2: [----------] Global test environment tear-down
2: [==========] 5 tests from 2 test suites ran. (54 ms total)
2: [  PASSED  ] 5 tests.
3: [       OK ] Utils.potential_file (28 ms)
3: [ RUN      ] Utils.unit_conversion
3: [       OK ] Utils.unit_conversion (1 ms)
3: [ RUN      ] Utils.timespec2seconds_ss
3: [       OK ] Utils.timespec2seconds_ss (1 ms)
3: [ RUN      ] Utils.timespec2seconds_mmss
3: [       OK ] Utils.timespec2seconds_mmss (0 ms)
3: [ RUN      ] Utils.timespec2seconds_hhmmss
3: [       OK ] Utils.timespec2seconds_hhmmss (1 ms)
3: [ RUN      ] Utils.date2num
3: [       OK ] Utils.date2num (2 ms)
3: [----------] 82 tests from Utils (94 ms total)
3: 
3: [----------] Global test environment tear-down
3: [==========] 82 tests from 1 test suite ran. (99 ms total)
3: [  PASSED  ] 82 tests.
4: [       OK ] FmtLib.int_for_double (89 ms)
4: [ RUN      ] FmtLib.double_for_int
4: [       OK ] FmtLib.double_for_int (3 ms)
4: [----------] 13 tests from FmtLib (122 ms total)
4: 
4: [----------] Global test environment tear-down
4: [==========] 13 tests from 1 test suite ran. (137 ms total)
4: [  PASSED  ] 9 tests.
4: [  SKIPPED ] 4 tests, listed below:
4: [  SKIPPED ] FmtLib.insert_tagint
4: [  SKIPPED ] FmtLib.insert_neg_tagint
4: [  SKIPPED ] FmtLib.insert_imageint
4: [  SKIPPED ] FmtLib.insert_neg_imageint
 1/31 Test  #1: Tokenizer ........................   Passed    1.11 sec
test 5
      Start  5: MathEigen
5: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/utils/test_math_eigen_impl "10" "5"
5: Test timeout computed to be: 1500
 2/31 Test  #2: MemPool ..........................   Passed    1.15 sec
test 6
      Start  6: AtomStyles
6: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/test_atom_styles
6: Test timeout computed to be: 1500
 3/31 Test  #3: Utils ............................   Passed    1.15 sec
test 7
      Start  7: PairUnitConvert
7: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/test_pair_unit_convert
7: Environment variables: 
7:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
7: Test timeout computed to be: 1500
 4/31 Test  #4: FmtLib ...........................   Passed    1.12 sec
test 8
      Start  8: PotentialFileReader
8: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/test_potential_file_reader
8: Environment variables: 
8:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
8: Test timeout computed to be: 1500
5: 
5: -- Diagonalization test (real symmetric)  --
5: test passed
5: 
 5/31 Test  #5: MathEigen ........................   Passed    0.24 sec
test 9
      Start  9: EIMPotentialFileReader
9: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/test_eim_potential_file_reader
9: Environment variables: 
9:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
9: Test timeout computed to be: 1500
7: [==========] Running 20 tests from 1 test suite.
7: [----------] Global test environment set-up.
7: [----------] 20 tests from PairUnitConvertTest
7: [ RUN      ] PairUnitConvertTest.zero
6: [==========] Running 12 tests from 1 test suite.
6: [----------] Global test environment set-up.
6: [----------] 12 tests from AtomStyleTest
6: [ RUN      ] AtomStyleTest.atomic
9: [==========] Running 5 tests from 1 test suite.
9: [----------] Global test environment set-up.
9: [----------] 5 tests from EIMPotentialFileReaderTest
9: [ RUN      ] EIMPotentialFileReaderTest.global_line
8: [==========] Running 15 tests from 1 test suite.
8: [----------] Global test environment set-up.
8: [----------] 15 tests from PotentialFileReaderTest
8: [ RUN      ] PotentialFileReaderTest.Sw_native
8: [       OK ] PotentialFileReaderTest.Sw_native (253 ms)
8: [ RUN      ] PotentialFileReaderTest.Sw_conv
9: [       OK ] EIMPotentialFileReaderTest.global_line (283 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.element_line_sequential
8: [       OK ] PotentialFileReaderTest.Sw_conv (144 ms)
8: [ RUN      ] PotentialFileReaderTest.Sw_noconv
9: [       OK ] EIMPotentialFileReaderTest.element_line_sequential (133 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.element_line_random
7: [       OK ] PairUnitConvertTest.zero (499 ms)
7: [ RUN      ] PairUnitConvertTest.lj_cut
8: [       OK ] PotentialFileReaderTest.Sw_noconv (71 ms)
8: [ RUN      ] PotentialFileReaderTest.Comb
9: [       OK ] EIMPotentialFileReaderTest.element_line_random (77 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.pair_line
8: [       OK ] PotentialFileReaderTest.Comb (25 ms)
8: [ RUN      ] PotentialFileReaderTest.Comb3
6: [       OK ] AtomStyleTest.atomic (535 ms)
6: [ RUN      ] AtomStyleTest.charge
8: [       OK ] PotentialFileReaderTest.Comb3 (24 ms)
8: [ RUN      ] PotentialFileReaderTest.Tersoff
9: [       OK ] EIMPotentialFileReaderTest.pair_line (42 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.pair_identical
8: [       OK ] PotentialFileReaderTest.Tersoff (23 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffMod
8: [       OK ] PotentialFileReaderTest.TersoffMod (25 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffModC
9: [       OK ] EIMPotentialFileReaderTest.pair_identical (52 ms)
9: [----------] 5 tests from EIMPotentialFileReaderTest (604 ms total)
9: 
9: [----------] Global test environment tear-down
9: [==========] 5 tests from 1 test suite ran. (619 ms total)
9: [  PASSED  ] 5 tests.
8: [       OK ] PotentialFileReaderTest.TersoffModC (24 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffTable
8: [       OK ] PotentialFileReaderTest.TersoffTable (25 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffZBL
 6/31 Test  #9: EIMPotentialFileReader ...........   Passed    1.70 sec
test 10
      Start 10: FileOperations
10: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/test_file_operations
10: Test timeout computed to be: 1500
8: [       OK ] PotentialFileReaderTest.TersoffZBL (24 ms)
8: [ RUN      ] PotentialFileReaderTest.GW
6: [       OK ] AtomStyleTest.charge (184 ms)
6: [ RUN      ] AtomStyleTest.sphere
8: [       OK ] PotentialFileReaderTest.GW (62 ms)
8: [ RUN      ] PotentialFileReaderTest.GWZBL
8: [       OK ] PotentialFileReaderTest.GWZBL (54 ms)
8: [ RUN      ] PotentialFileReaderTest.Nb3bHarmonic
8: [       OK ] PotentialFileReaderTest.Nb3bHarmonic (24 ms)
8: [ RUN      ] PotentialFileReaderTest.Vashishta
8: [       OK ] PotentialFileReaderTest.Vashishta (25 ms)
8: [ RUN      ] PotentialFileReaderTest.UnitConvert
8: [       OK ] PotentialFileReaderTest.UnitConvert (37 ms)
8: [----------] 15 tests from PotentialFileReaderTest (863 ms total)
8: 
8: [----------] Global test environment tear-down
8: [==========] 15 tests from 1 test suite ran. (871 ms total)
8: [  PASSED  ] 15 tests.
6: [       OK ] AtomStyleTest.sphere (182 ms)
6: [ RUN      ] AtomStyleTest.ellipsoid
 7/31 Test  #8: PotentialFileReader ..............   Passed    2.04 sec
test 11
      Start 11: DumpAtom
11: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/test_dump_atom
11: Environment variables: 
11:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
11: Test timeout computed to be: 1500
7: [       OK ] PairUnitConvertTest.lj_cut (488 ms)
7: [ RUN      ] PairUnitConvertTest.eam
6: [       OK ] AtomStyleTest.ellipsoid (144 ms)
6: [ RUN      ] AtomStyleTest.line
7: [       OK ] PairUnitConvertTest.eam (165 ms)
7: [ RUN      ] PairUnitConvertTest.eam_alloy
6: [       OK ] AtomStyleTest.line (124 ms)
6: [ RUN      ] AtomStyleTest.tri
6: [       OK ] AtomStyleTest.tri (131 ms)
6: [ RUN      ] AtomStyleTest.body_nparticle
6: [       OK ] AtomStyleTest.body_nparticle (197 ms)
6: [ RUN      ] AtomStyleTest.template
10: [==========] Running 3 tests from 1 test suite.
10: [----------] Global test environment set-up.
10: [----------] 3 tests from FileOperationsTest
10: [ RUN      ] FileOperationsTest.safe_fgets
7: [       OK ] PairUnitConvertTest.eam_alloy (487 ms)
7: [ RUN      ] PairUnitConvertTest.eam_fs
6: [       OK ] AtomStyleTest.template (175 ms)
6: [ RUN      ] AtomStyleTest.template_charge
11: [==========] Running 31 tests from 1 test suite.
11: [----------] Global test environment set-up.
11: [----------] 31 tests from DumpAtomTest
11: [ RUN      ] DumpAtomTest.run0
10: [       OK ] FileOperationsTest.safe_fgets (246 ms)
10: [ RUN      ] FileOperationsTest.safe_fread
6: [       OK ] AtomStyleTest.template_charge (189 ms)
6: [ RUN      ] AtomStyleTest.bond
10: [       OK ] FileOperationsTest.safe_fread (54 ms)
10: [ RUN      ] FileOperationsTest.logmesg
10: [       OK ] FileOperationsTest.logmesg (81 ms)
10: [----------] 3 tests from FileOperationsTest (395 ms total)
10: 
10: [----------] Global test environment tear-down
10: [==========] 3 tests from 1 test suite ran. (409 ms total)
10: [  PASSED  ] 3 tests.
 8/31 Test #10: FileOperations ...................   Passed    1.36 sec
test 12
      Start 12: DumpCustom
12: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/test_dump_custom
12: Environment variables: 
12:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
12: Test timeout computed to be: 1500
6: [       OK ] AtomStyleTest.bond (220 ms)
6: [ RUN      ] AtomStyleTest.angle
11: [       OK ] DumpAtomTest.run0 (354 ms)
11: [ RUN      ] DumpAtomTest.format_line_run0
6: [       OK ] AtomStyleTest.angle (188 ms)
6: [ RUN      ] AtomStyleTest.full_ellipsoid
11: [       OK ] DumpAtomTest.format_line_run0 (70 ms)
11: [ RUN      ] DumpAtomTest.no_scale_run0
11: [       OK ] DumpAtomTest.no_scale_run0 (65 ms)
11: [ RUN      ] DumpAtomTest.no_buffer_no_scale_run0
11: [       OK ] DumpAtomTest.no_buffer_no_scale_run0 (110 ms)
11: [ RUN      ] DumpAtomTest.no_buffer_with_scale_run0
6: [       OK ] AtomStyleTest.full_ellipsoid (205 ms)
6: [----------] 12 tests from AtomStyleTest (2483 ms total)
6: 
6: [----------] Global test environment tear-down
6: [==========] 12 tests from 1 test suite ran. (2490 ms total)
6: [  PASSED  ] 12 tests.
 9/31 Test  #6: AtomStyles .......................   Passed    3.77 sec
test 13
      Start 13: DumpCfg
13: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/formats/test_dump_cfg
13: Environment variables: 
13:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
13: Test timeout computed to be: 1500
11: [       OK ] DumpAtomTest.no_buffer_with_scale_run0 (161 ms)
11: [ RUN      ] DumpAtomTest.with_image_run0
11: [       OK ] DumpAtomTest.with_image_run0 (50 ms)
11: [ RUN      ] DumpAtomTest.with_units_run0
11: [       OK ] DumpAtomTest.with_units_run0 (51 ms)
11: [ RUN      ] DumpAtomTest.with_time_run0
11: [       OK ] DumpAtomTest.with_time_run0 (62 ms)
11: [ RUN      ] DumpAtomTest.with_units_run1
11: [       OK ] DumpAtomTest.with_units_run1 (65 ms)
11: [ RUN      ] DumpAtomTest.no_buffer_with_scale_and_image_run0
12: [==========] Running 9 tests from 1 test suite.
12: [----------] Global test environment set-up.
12: [----------] 9 tests from DumpCustomTest
12: [ RUN      ] DumpCustomTest.run1
11: [       OK ] DumpAtomTest.no_buffer_with_scale_and_image_run0 (51 ms)
11: [ RUN      ] DumpAtomTest.triclinic_run0
11: [       OK ] DumpAtomTest.triclinic_run0 (56 ms)
11: [ RUN      ] DumpAtomTest.triclinic_with_units_run0
11: [       OK ] DumpAtomTest.triclinic_with_units_run0 (53 ms)
11: [ RUN      ] DumpAtomTest.triclinic_with_time_run0
11: [       OK ] DumpAtomTest.triclinic_with_time_run0 (54 ms)
11: [ RUN      ] DumpAtomTest.triclinic_with_image_run0
11: [       OK ] DumpAtomTest.triclinic_with_image_run0 (68 ms)
11: [ RUN      ] DumpAtomTest.binary_run0
11: [  SKIPPED ] DumpAtomTest.binary_run0 (42 ms)
11: [ RUN      ] DumpAtomTest.binary_with_units_run0
11: [  SKIPPED ] DumpAtomTest.binary_with_units_run0 (29 ms)
11: [ RUN      ] DumpAtomTest.binary_with_time_run0
12: [       OK ] DumpCustomTest.run1 (367 ms)
12: [ RUN      ] DumpCustomTest.thresh_run0
11: [  SKIPPED ] DumpAtomTest.binary_with_time_run0 (78 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_run0
13: [==========] Running 6 tests from 1 test suite.
13: [----------] Global test environment set-up.
13: [----------] 6 tests from DumpCfgTest
13: [ RUN      ] DumpCfgTest.invalid_options
12: [       OK ] DumpCustomTest.thresh_run0 (123 ms)
12: [ RUN      ] DumpCustomTest.compute_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_run0 (105 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_with_units_run0
12: [       OK ] DumpCustomTest.compute_run0 (75 ms)
12: [ RUN      ] DumpCustomTest.fix_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_units_run0 (65 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_with_time_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_time_run0 (68 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_with_image_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_image_run0 (45 ms)
11: [ RUN      ] DumpAtomTest.run1
13: [       OK ] DumpCfgTest.invalid_options (349 ms)
13: [ RUN      ] DumpCfgTest.require_multifile
11: [       OK ] DumpAtomTest.run1 (65 ms)
11: [ RUN      ] DumpAtomTest.run2
11: [       OK ] DumpAtomTest.run2 (57 ms)
11: [ RUN      ] DumpAtomTest.multi_file_run1
11: [       OK ] DumpAtomTest.multi_file_run1 (66 ms)
11: [ RUN      ] DumpAtomTest.per_processor_file_run1
12: [       OK ] DumpCustomTest.fix_run0 (408 ms)
12: [ RUN      ] DumpCustomTest.custom_run0
13: [       OK ] DumpCfgTest.require_multifile (166 ms)
13: [ RUN      ] DumpCfgTest.run0
11: [       OK ] DumpAtomTest.per_processor_file_run1 (65 ms)
11: [ RUN      ] DumpAtomTest.per_processor_multi_file_run1
11: [       OK ] DumpAtomTest.per_processor_multi_file_run1 (55 ms)
11: [ RUN      ] DumpAtomTest.dump_modify_scale_invalid
12: [       OK ] DumpCustomTest.custom_run0 (110 ms)
12: [ RUN      ] DumpCustomTest.binary_run1
11: [       OK ] DumpAtomTest.dump_modify_scale_invalid (63 ms)
11: [ RUN      ] DumpAtomTest.dump_modify_image_invalid
11: [       OK ] DumpAtomTest.dump_modify_image_invalid (39 ms)
11: [ RUN      ] DumpAtomTest.dump_modify_invalid
12: [  SKIPPED ] DumpCustomTest.binary_run1 (95 ms)
12: [ RUN      ] DumpCustomTest.triclinic_run1
13: [       OK ] DumpCfgTest.run0 (208 ms)
13: [ RUN      ] DumpCfgTest.unwrap_run0
11: [       OK ] DumpAtomTest.dump_modify_invalid (49 ms)
11: [ RUN      ] DumpAtomTest.write_dump
13: [       OK ] DumpCfgTest.unwrap_run0 (54 ms)
13: [ RUN      ] DumpCfgTest.no_buffer_run0
12: [       OK ] DumpCustomTest.triclinic_run1 (107 ms)
12: [ RUN      ] DumpCustomTest.binary_triclinic_run1
13: [       OK ] DumpCfgTest.no_buffer_run0 (54 ms)
13: [ RUN      ] DumpCfgTest.no_unwrap_no_buffer_run0
11: [       OK ] DumpAtomTest.write_dump (73 ms)
11: [ RUN      ] DumpAtomTest.binary_write_dump
12: [  SKIPPED ] DumpCustomTest.binary_triclinic_run1 (40 ms)
12: [ RUN      ] DumpCustomTest.with_variable_run1
11: [  SKIPPED ] DumpAtomTest.binary_write_dump (48 ms)
11: [----------] 31 tests from DumpAtomTest (2414 ms total)
11: 
11: [----------] Global test environment tear-down
11: [==========] 31 tests from 1 test suite ran. (2431 ms total)
11: [  PASSED  ] 23 tests.
11: [  SKIPPED ] 8 tests, listed below:
11: [  SKIPPED ] DumpAtomTest.binary_run0
11: [  SKIPPED ] DumpAtomTest.binary_with_units_run0
11: [  SKIPPED ] DumpAtomTest.binary_with_time_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_units_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_time_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_image_run0
11: [  SKIPPED ] DumpAtomTest.binary_write_dump
12: [       OK ] DumpCustomTest.with_variable_run1 (58 ms)
12: [----------] 9 tests from DumpCustomTest (1395 ms total)
12: 
12: [----------] Global test environment tear-down
12: [==========] 9 tests from 1 test suite ran. (1402 ms total)
12: [  PASSED  ] 7 tests.
12: [  SKIPPED ] 2 tests, listed below:
12: [  SKIPPED ] DumpCustomTest.binary_run1
12: [  SKIPPED ] DumpCustomTest.binary_triclinic_run1
13: [       OK ] DumpCfgTest.no_unwrap_no_buffer_run0 (119 ms)
13: [----------] 6 tests from DumpCfgTest (977 ms total)
13: 
13: [----------] Global test environment tear-down
13: [==========] 6 tests from 1 test suite ran. (984 ms total)
13: [  PASSED  ] 6 tests.
7: [       OK ] PairUnitConvertTest.eam_fs (2731 ms)
7: [ RUN      ] PairUnitConvertTest.eam_cd
10/31 Test #12: DumpCustom .......................   Passed    2.31 sec
test 14
      Start 14: SimpleCommands
14: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/test_simple_commands
14: Test timeout computed to be: 1500
11/31 Test #11: DumpAtom .........................   Passed    3.52 sec
test 15
      Start 15: LatticeRegion
15: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/test_lattice_region
15: Test timeout computed to be: 1500
12/31 Test #13: DumpCfg ..........................   Passed    1.97 sec
test 16
      Start 16: KimCommands
16: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/test_kim_commands
16: Test timeout computed to be: 1500
14: [==========] Running 10 tests from 1 test suite.
14: [----------] Global test environment set-up.
14: [----------] 10 tests from SimpleCommandsTest
14: [ RUN      ] SimpleCommandsTest.UnknownCommand
7: [       OK ] PairUnitConvertTest.eam_cd (836 ms)
7: [ RUN      ] PairUnitConvertTest.eim
15: [==========] Running 20 tests from 1 test suite.
15: [----------] Global test environment set-up.
15: [----------] 20 tests from LatticeRegionTest
15: [ RUN      ] LatticeRegionTest.lattice_none
16: [==========] Running 4 tests from 1 test suite.
16: [----------] Global test environment set-up.
16: [----------] 4 tests from KimCommandsTest
16: [ RUN      ] KimCommandsTest.kim_init
14: [       OK ] SimpleCommandsTest.UnknownCommand (221 ms)
14: [ RUN      ] SimpleCommandsTest.Echo
14: [       OK ] SimpleCommandsTest.Echo (51 ms)
14: [ RUN      ] SimpleCommandsTest.Log
14: [       OK ] SimpleCommandsTest.Log (86 ms)
14: [ RUN      ] SimpleCommandsTest.Quit
15: [       OK ] LatticeRegionTest.lattice_none (327 ms)
15: [ RUN      ] LatticeRegionTest.lattice_sc
15: [       OK ] LatticeRegionTest.lattice_sc (180 ms)
15: [ RUN      ] LatticeRegionTest.lattice_bcc
14: [       OK ] SimpleCommandsTest.Quit (300 ms)
14: [ RUN      ] SimpleCommandsTest.ResetTimestep
15: [       OK ] LatticeRegionTest.lattice_bcc (88 ms)
15: [ RUN      ] LatticeRegionTest.lattice_fcc
14: [       OK ] SimpleCommandsTest.ResetTimestep (98 ms)
14: [ RUN      ] SimpleCommandsTest.Suffix
15: [       OK ] LatticeRegionTest.lattice_fcc (60 ms)
14: [       OK ] SimpleCommandsTest.Suffix (55 ms)
14: [ RUN      ] SimpleCommandsTest.Thermo
15: [ RUN      ] LatticeRegionTest.lattice_hcp
16: [       OK ] KimCommandsTest.kim_init (618 ms)
16: [ RUN      ] KimCommandsTest.kim_interactions
15: [       OK ] LatticeRegionTest.lattice_hcp (63 ms)
15: [ RUN      ] LatticeRegionTest.lattice_diamond
15: [       OK ] LatticeRegionTest.lattice_diamond (37 ms)
15: [ RUN      ] LatticeRegionTest.lattice_sq
14: [       OK ] SimpleCommandsTest.Thermo (145 ms)
14: [ RUN      ] SimpleCommandsTest.TimeStep
15: [       OK ] LatticeRegionTest.lattice_sq (41 ms)
15: [ RUN      ] LatticeRegionTest.lattice_sq2
15: [       OK ] LatticeRegionTest.lattice_sq2 (33 ms)
15: [ RUN      ] LatticeRegionTest.lattice_hex
15: [       OK ] LatticeRegionTest.lattice_hex (33 ms)
15: [ RUN      ] LatticeRegionTest.lattice_custom
14: [       OK ] SimpleCommandsTest.TimeStep (89 ms)
14: [ RUN      ] SimpleCommandsTest.Units
15: [       OK ] LatticeRegionTest.lattice_custom (104 ms)
15: [ RUN      ] LatticeRegionTest.region_fail
14: [       OK ] SimpleCommandsTest.Units (162 ms)
14: [ RUN      ] SimpleCommandsTest.Shell
15: [       OK ] LatticeRegionTest.region_fail (90 ms)
15: [ RUN      ] LatticeRegionTest.region_block_lattice
14: [       OK ] SimpleCommandsTest.Shell (42 ms)
14: [----------] 10 tests from SimpleCommandsTest (1277 ms total)
14: 
14: [----------] Global test environment tear-down
14: [==========] 10 tests from 1 test suite ran. (1292 ms total)
14: [  PASSED  ] 10 tests.
13/31 Test #14: SimpleCommands ...................   Passed    2.11 sec
test 17
      Start 17: ResetIDs
17: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/commands/test_reset_ids
17: Test timeout computed to be: 1500
15: [       OK ] LatticeRegionTest.region_block_lattice (52 ms)
15: [ RUN      ] LatticeRegionTest.region_block_box
15: [       OK ] LatticeRegionTest.region_block_box (38 ms)
15: [ RUN      ] LatticeRegionTest.region_cone
15: [       OK ] LatticeRegionTest.region_cone (50 ms)
15: [ RUN      ] LatticeRegionTest.region_cylinder
15: [       OK ] LatticeRegionTest.region_cylinder (63 ms)
15: [ RUN      ] LatticeRegionTest.region_prism
15: [       OK ] LatticeRegionTest.region_prism (31 ms)
15: [ RUN      ] LatticeRegionTest.region_sphere
15: [       OK ] LatticeRegionTest.region_sphere (30 ms)
15: [ RUN      ] LatticeRegionTest.region_union
15: [       OK ] LatticeRegionTest.region_union (32 ms)
15: [ RUN      ] LatticeRegionTest.region_intersect
15: [       OK ] LatticeRegionTest.region_intersect (38 ms)
15: [ RUN      ] LatticeRegionTest.region_plane
15: [       OK ] LatticeRegionTest.region_plane (38 ms)
15: [----------] 20 tests from LatticeRegionTest (1556 ms total)
15: 
15: [----------] Global test environment tear-down
15: [==========] 20 tests from 1 test suite ran. (1579 ms total)
15: [  PASSED  ] 20 tests.
14/31 Test #15: LatticeRegion ....................   Passed    2.45 sec
test 18
      Start 18: LibraryOpen
18: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/test_library_open
18: Test timeout computed to be: 1500
16: [       OK ] KimCommandsTest.kim_interactions (1016 ms)
16: [ RUN      ] KimCommandsTest.kim_param
17: [==========] Running 7 tests from 2 test suites.
17: [----------] Global test environment set-up.
17: [----------] 6 tests from ResetIDsTest
17: [ RUN      ] ResetIDsTest.MolIDAll
18: [==========] Running 6 tests from 3 test suites.
18: [----------] Global test environment set-up.
18: [----------] 3 tests from lammps_open
18: [ RUN      ] lammps_open.null_args
7: [       OK ] PairUnitConvertTest.eim (2634 ms)
7: [ RUN      ] PairUnitConvertTest.gw
17: [       OK ] ResetIDsTest.MolIDAll (408 ms)
17: [ RUN      ] ResetIDsTest.DeletePlusAtomID
7: [       OK ] PairUnitConvertTest.gw (86 ms)
7: [ RUN      ] PairUnitConvertTest.gw_zbl
18: [       OK ] lammps_open.null_args (223 ms)
18: [ RUN      ] lammps_open.with_args
18: Using a 'void **' argument to return the LAMMPS handle is deprecated.  Please use the return value instead.
7: [       OK ] PairUnitConvertTest.gw_zbl (89 ms)
7: [ RUN      ] PairUnitConvertTest.nb3b_harmonic
17: [       OK ] ResetIDsTest.DeletePlusAtomID (153 ms)
17: [ RUN      ] ResetIDsTest.PartialOffset
18: [       OK ] lammps_open.with_args (57 ms)
18: [ RUN      ] lammps_open.with_kokkos
18: [  SKIPPED ] lammps_open.with_kokkos (2 ms)
18: [----------] 3 tests from lammps_open (285 ms total)
18: 
18: [----------] 2 tests from lammps_open_no_mpi
18: [ RUN      ] lammps_open_no_mpi.no_screen
7: [       OK ] PairUnitConvertTest.nb3b_harmonic (82 ms)
7: [ RUN      ] PairUnitConvertTest.sw
18: [       OK ] lammps_open_no_mpi.no_screen (38 ms)
18: [ RUN      ] lammps_open_no_mpi.with_omp
18: [       OK ] lammps_open_no_mpi.with_omp (76 ms)
18: [----------] 2 tests from lammps_open_no_mpi (116 ms total)
18: 
18: [----------] 1 test from lammps_open_fortran
18: [ RUN      ] lammps_open_fortran.no_args
7: [       OK ] PairUnitConvertTest.sw (91 ms)
7: [ RUN      ] PairUnitConvertTest.table_metal2real
17: [       OK ] ResetIDsTest.PartialOffset (171 ms)
18: [       OK ] lammps_open_fortran.no_args (37 ms)
18: [----------] 1 test from lammps_open_fortran (37 ms total)
18: 
18: [----------] Global test environment tear-down
18: [==========] 6 tests from 3 test suites ran. (450 ms total)
18: [  PASSED  ] 5 tests.
18: [  SKIPPED ] 1 test, listed below:
18: [  SKIPPED ] lammps_open.with_kokkos
17: [ RUN      ] ResetIDsTest.DeleteAdd
15/31 Test #18: LibraryOpen ......................   Passed    1.30 sec
test 19
      Start 19: LibraryCommands
19: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/test_library_commands
19: Test timeout computed to be: 1500
17: [       OK ] ResetIDsTest.DeleteAdd (228 ms)
17: [ RUN      ] ResetIDsTest.TopologyData
17: [       OK ] ResetIDsTest.TopologyData (94 ms)
17: [ RUN      ] ResetIDsTest.DeathTests
7: [       OK ] PairUnitConvertTest.table_metal2real (423 ms)
7: [ RUN      ] PairUnitConvertTest.table_real2metal
17: [       OK ] ResetIDsTest.DeathTests (216 ms)
17: [----------] 6 tests from ResetIDsTest (1313 ms total)
17: 
17: [----------] 1 test from ResetMolIds
17: [ RUN      ] ResetMolIds.CMDFail
17: [       OK ] ResetMolIds.CMDFail (52 ms)
17: [----------] 1 test from ResetMolIds (54 ms total)
17: 
17: [----------] Global test environment tear-down
17: [==========] 7 tests from 2 test suites ran. (1383 ms total)
17: [  PASSED  ] 7 tests.
16/31 Test #17: ResetIDs .........................   Passed    2.37 sec
test 20
      Start 20: LibraryProperties
20: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/test_library_properties
20: Test timeout computed to be: 1500
7: [       OK ] PairUnitConvertTest.table_real2metal (368 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff
19: [==========] Running 4 tests from 1 test suite.
19: [----------] Global test environment set-up.
19: [----------] 4 tests from LibraryCommands
19: [ RUN      ] LibraryCommands.from_file
7: [       OK ] PairUnitConvertTest.tersoff (83 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_mod
7: [       OK ] PairUnitConvertTest.tersoff_mod (79 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_mod_c
7: [       OK ] PairUnitConvertTest.tersoff_mod_c (77 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_table
19: [       OK ] LibraryCommands.from_file (243 ms)
19: [ RUN      ] LibraryCommands.from_line
19: [       OK ] LibraryCommands.from_line (92 ms)
19: [ RUN      ] LibraryCommands.from_list
19: [       OK ] LibraryCommands.from_list (68 ms)
19: [ RUN      ] LibraryCommands.from_string
19: [       OK ] LibraryCommands.from_string (31 ms)
19: [----------] 4 tests from LibraryCommands (449 ms total)
19: 
19: [----------] Global test environment tear-down
19: [==========] 4 tests from 1 test suite ran. (462 ms total)
19: [  PASSED  ] 4 tests.
17/31 Test #19: LibraryCommands ..................   Passed    1.26 sec
test 21
      Start 21: LibraryConfig
21: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/c-library/test_library_config
21: Test timeout computed to be: 1500
20: [==========] Running 13 tests from 2 test suites.
20: [----------] Global test environment set-up.
20: [----------] 8 tests from LibraryProperties
20: [ RUN      ] LibraryProperties.version
20: [       OK ] LibraryProperties.version (199 ms)
20: [ RUN      ] LibraryProperties.memory_usage
16: [       OK ] KimCommandsTest.kim_param (2830 ms)
20: [       OK ] LibraryProperties.memory_usage (44 ms)
20: [ RUN      ] LibraryProperties.get_mpi_comm
16: [ RUN      ] KimCommandsTest.kim_property
20: [       OK ] LibraryProperties.get_mpi_comm (35 ms)
20: [ RUN      ] LibraryProperties.natoms
20: [       OK ] LibraryProperties.natoms (210 ms)
20: [ RUN      ] LibraryProperties.thermo
21: [==========] Running 17 tests from 2 test suites.
21: [----------] Global test environment set-up.
21: [----------] 9 tests from LAMMPSConfig
21: [ RUN      ] LAMMPSConfig.package_count
21: [       OK ] LAMMPSConfig.package_count (1 ms)
21: [ RUN      ] LAMMPSConfig.has_package
21: [       OK ] LAMMPSConfig.has_package (1 ms)
21: [ RUN      ] LAMMPSConfig.package_name
21: [       OK ] LAMMPSConfig.package_name (1 ms)
21: [ RUN      ] LAMMPSConfig.exceptions
21: [       OK ] LAMMPSConfig.exceptions (0 ms)
21: [ RUN      ] LAMMPSConfig.mpi_support
21: [       OK ] LAMMPSConfig.mpi_support (0 ms)
21: [ RUN      ] LAMMPSConfig.png_support
21: [       OK ] LAMMPSConfig.png_support (1 ms)
20: [       OK ] LibraryProperties.thermo (191 ms)
20: [ RUN      ] LibraryProperties.box
21: [ RUN      ] LAMMPSConfig.jpeg_support
21: [       OK ] LAMMPSConfig.jpeg_support (0 ms)
21: [ RUN      ] LAMMPSConfig.gzip_support
21: [       OK ] LAMMPSConfig.gzip_support (0 ms)
21: [ RUN      ] LAMMPSConfig.ffmpeg_support
21: [       OK ] LAMMPSConfig.ffmpeg_support (0 ms)
21: [----------] 9 tests from LAMMPSConfig (28 ms total)
21: 
21: [----------] 8 tests from LibraryConfig
21: [ RUN      ] LibraryConfig.has_style
20:   1 by 1 by 1 MPI processor grid
20: [       OK ] LibraryProperties.box (104 ms)
20: [ RUN      ] LibraryProperties.setting
20: [       OK ] LibraryProperties.setting (105 ms)
20: [ RUN      ] LibraryProperties.global
21: [       OK ] LibraryConfig.has_style (223 ms)
21: [ RUN      ] LibraryConfig.style_count
20: [       OK ] LibraryProperties.global (103 ms)
20: [----------] 8 tests from LibraryProperties (1000 ms total)
20: 
20: [----------] 5 tests from AtomProperties
20: [ RUN      ] AtomProperties.invalid
21: [       OK ] LibraryConfig.style_count (115 ms)
20: [       OK ] AtomProperties.invalid (40 ms)
20: [ RUN      ] AtomProperties.mass
21: [ RUN      ] LibraryConfig.style_name
16: [       OK ] KimCommandsTest.kim_property (816 ms)
21: [       OK ] LibraryConfig.style_name (33 ms)
21: [ RUN      ] LibraryConfig.has_id
20: [       OK ] AtomProperties.mass (42 ms)
20: [ RUN      ] AtomProperties.id
16: [----------] 4 tests from KimCommandsTest (5307 ms total)
16: 
16: [----------] Global test environment tear-down
16: [==========] 4 tests from 1 test suite ran. (5330 ms total)
16: [  PASSED  ] 4 tests.
20: [       OK ] AtomProperties.id (25 ms)
20: [ RUN      ] AtomProperties.type
21: [       OK ] LibraryConfig.has_id (50 ms)
21: [ RUN      ] LibraryConfig.id_count
20: [       OK ] AtomProperties.type (36 ms)
20: [ RUN      ] AtomProperties.position
18/31 Test #16: KimCommands ......................   Passed    6.20 sec
test 22
      Start 22: LammpsClass
22: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/test_lammps_class
22: Test timeout computed to be: 1500
20: [       OK ] AtomProperties.position (26 ms)
20: [----------] 5 tests from AtomProperties (174 ms total)
20: 
20: [----------] Global test environment tear-down
20: [==========] 13 tests from 2 test suites ran. (1184 ms total)
20: [  PASSED  ] 13 tests.
21: [       OK ] LibraryConfig.id_count (75 ms)
21: [ RUN      ] LibraryConfig.id_name
21: [       OK ] LibraryConfig.id_name (25 ms)
21: [ RUN      ] LibraryConfig.is_running
19/31 Test #20: LibraryProperties ................   Passed    1.99 sec
test 23
      Start 23: InputClass
23: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/cplusplus/test_input_class
23: Test timeout computed to be: 1500
21: [       OK ] LibraryConfig.is_running (22 ms)
21: [ RUN      ] LibraryConfig.force_timeout
21: [       OK ] LibraryConfig.force_timeout (23 ms)
21: [----------] 8 tests from LibraryConfig (595 ms total)
21: 
21: [----------] Global test environment tear-down
21: [==========] 17 tests from 2 test suites ran. (634 ms total)
21: [  PASSED  ] 17 tests.
20/31 Test #21: LibraryConfig ....................   Passed    1.46 sec
test 24
      Start 24: FortranOpen
24: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/test_fortran_create
24: Test timeout computed to be: 1500
22: Running main() from gmock_main.cc
22: [==========] Running 5 tests from 4 test suites.
22: [----------] Global test environment set-up.
22: [----------] 2 tests from LAMMPS_plain
22: [ RUN      ] LAMMPS_plain.InitMembers
23: Running main() from /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/src/gtest_main.cc
23: [==========] Running 3 tests from 1 test suite.
23: [----------] Global test environment set-up.
23: [----------] 3 tests from Input_commands
23: [ RUN      ] Input_commands.from_file
24: Running main() from /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/src/gtest_main.cc
24: [==========] Running 4 tests from 2 test suites.
24: [----------] Global test environment set-up.
24: [----------] 2 tests from open_no_mpi
24: [ RUN      ] open_no_mpi.no_args
22: [       OK ] LAMMPS_plain.InitMembers (427 ms)
22: [ RUN      ] LAMMPS_plain.TestStyles
22: [       OK ] LAMMPS_plain.TestStyles (45 ms)
22: [----------] 2 tests from LAMMPS_plain (480 ms total)
22: 
22: [----------] 1 test from LAMMPS_omp
22: [ RUN      ] LAMMPS_omp.InitMembers
24: Using a 'void **' argument to return the LAMMPS handle is deprecated.  Please use the return value instead.
22: [       OK ] LAMMPS_omp.InitMembers (68 ms)
22: [----------] 1 test from LAMMPS_omp (70 ms total)
22: 
22: [----------] 1 test from LAMMPS_kokkos
22: [ RUN      ] LAMMPS_kokkos.InitMembers
22: [  SKIPPED ] LAMMPS_kokkos.InitMembers (4 ms)
22: [----------] 1 test from LAMMPS_kokkos (7 ms total)
22: 
22: [----------] 1 test from LAMMPS_help
22: [ RUN      ] LAMMPS_help.HelpMessage
23: region       box block 0 $x 0 2 0 2
23: region       box block 0 2 0 2 0 2
23: create_box 1 box
23: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
23:   1 by 1 by 1 MPI processor grid
23: create_atoms 1 single 1.0 1.0 ${zpos}
23: create_atoms 1 single 1.0 1.0 1.5
23: Created 1 atoms
23:   create_atoms CPU = 0.003 seconds
23: create_atoms 1 single 0.2 0.1 0.1
23: Created 1 atoms
23:   create_atoms CPU = 0.006 seconds
23: [       OK ] Input_commands.from_file (474 ms)
23: [ RUN      ] Input_commands.from_line
23: region       box block 0 $x 0 2 0 2
23: region       box block 0 2 0 2 0 2
23: create_box 1 box
23: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
23:   1 by 1 by 1 MPI processor grid
23: create_atoms 1 single 1.0 1.0 ${zpos}
23: create_atoms 1 single 1.0 1.0 1.5
23: Created 1 atoms
23:   create_atoms CPU = 0.000 seconds
23: [       OK ] Input_commands.from_line (43 ms)
23: [ RUN      ] Input_commands.substitute
23: [       OK ] Input_commands.substitute (65 ms)
23: [----------] 3 tests from Input_commands (588 ms total)
23: 
23: [----------] Global test environment tear-down
23: [==========] 3 tests from 1 test suite ran. (602 ms total)
23: [  PASSED  ] 3 tests.
21/31 Test #22: LammpsClass ......................   Passed    1.32 sec
test 25
      Start 25: FortranCommands
25: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/fortran/test_fortran_commands
25: Test timeout computed to be: 1500
24: [       OK ] open_no_mpi.no_args (557 ms)
24: [ RUN      ] open_no_mpi.with_args
22/31 Test #23: InputClass .......................   Passed    1.33 sec
test 26
      Start 26: PythonPackage
26: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python/test_python_package
26: Environment variables: 
26:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
26:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/unittest/python:/builddir/build/BUILD/lammps-patch_29Oct2020/python:
26: Test timeout computed to be: 1500
24: [       OK ] open_no_mpi.with_args (100 ms)
24: [----------] 2 tests from open_no_mpi (661 ms total)
24: 
24: [----------] 2 tests from fortran_open
24: [ RUN      ] fortran_open.no_args
24: [       OK ] fortran_open.no_args (55 ms)
24: [ RUN      ] fortran_open.with_args
24: [       OK ] fortran_open.with_args (24 ms)
24: [----------] 2 tests from fortran_open (81 ms total)
24: 
24: [----------] Global test environment tear-down
24: [==========] 4 tests from 2 test suites ran. (755 ms total)
24: [  PASSED  ] 4 tests.
23/31 Test #24: FortranOpen ......................   Passed    1.40 sec
test 27
      Start 27: PythonOpen
27: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-open.py" "-v"
27: Environment variables: 
27:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
27:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib
27:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeCache.txt
27:  LAMMPS_MACHINE_NAME=mpich
27: Test timeout computed to be: 1500
25: Running main() from /builddir/build/BUILD/lammps-patch_29Oct2020/mpich/gtest-src/googletest/src/gtest_main.cc
25: [==========] Running 4 tests from 1 test suite.
25: [----------] Global test environment set-up.
25: [----------] 4 tests from LAMMPS_commands
25: [ RUN      ] LAMMPS_commands.from_file
26: [==========] Running 2 tests from 1 test suite.
26: [----------] Global test environment set-up.
26: [----------] 2 tests from PythonPackageTest
26: [ RUN      ] PythonPackageTest.python_invoke
25: Using a 'void **' argument to return the LAMMPS handle is deprecated.  Please use the return value instead.
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
26: [  SKIPPED ] PythonPackageTest.python_invoke (644 ms)
26: [ RUN      ] PythonPackageTest.python_variable
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.034 seconds
25: create_atoms 1 single  0.2 0.1 0.1
25: Created 1 atoms
25:   create_atoms CPU = 0.029 seconds
25: [       OK ] LAMMPS_commands.from_file (1018 ms)
25: [ RUN      ] LAMMPS_commands.from_line
26: [  SKIPPED ] PythonPackageTest.python_variable (198 ms)
26: [----------] 2 tests from PythonPackageTest (881 ms total)
26: 
26: [----------] Global test environment tear-down
26: [==========] 2 tests from 1 test suite ran. (890 ms total)
26: [  PASSED  ] 0 tests.
26: [  SKIPPED ] 2 tests, listed below:
26: [  SKIPPED ] PythonPackageTest.python_invoke
26: [  SKIPPED ] PythonPackageTest.python_variable
24/31 Test #26: PythonPackage ....................   Passed    1.70 sec
test 28
      Start 28: PythonCommands
28: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-commands.py" "-v"
28: Environment variables: 
28:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
28:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib
28:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeCache.txt
28:  LAMMPS_MACHINE_NAME=mpich
28: Test timeout computed to be: 1500
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.000 seconds
25: [       OK ] LAMMPS_commands.from_line (193 ms)
25: [ RUN      ] LAMMPS_commands.from_list
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.000 seconds
25: create_atoms 1 single    0.2 0.1 0.1
25: Created 1 atoms
25:   create_atoms CPU = 0.006 seconds
25: [       OK ] LAMMPS_commands.from_list (46 ms)
25: [ RUN      ] LAMMPS_commands.from_string
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.000 seconds
25: create_atoms 1 single    0.2 0.1 0.1
25: Created 1 atoms
25:   create_atoms CPU = 0.005 seconds
25: [       OK ] LAMMPS_commands.from_string (78 ms)
25: [----------] 4 tests from LAMMPS_commands (1354 ms total)
25: 
25: [----------] Global test environment tear-down
25: [==========] 4 tests from 1 test suite ran. (1368 ms total)
25: [  PASSED  ] 4 tests.
25/31 Test #25: FortranCommands ..................   Passed    1.98 sec
test 29
      Start 29: PythonNumpy
29: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-numpy.py" "-v"
29: Environment variables: 
29:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
29:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib
29:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeCache.txt
29:  LAMMPS_MACHINE_NAME=mpich
29: Test timeout computed to be: 1500
28: testCommand (__main__.PythonCommand)
27: LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: Total wall time: 0:00:00
29: testExtractAtom (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractAtomDeprecated (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeGlobalArray (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeGlobalScalar (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeGlobalVector (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeLocalArray (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeLocalScalar (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeLocalVector (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputePerAtomArray (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputePerAtomVector (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testLammpsPointer (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testNeighborList (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: 
29: ----------------------------------------------------------------------
29: Ran 12 tests in 0.053s
29: 
29: OK (skipped=12)
26/31 Test #29: PythonNumpy ......................   Passed    2.08 sec
test 30
      Start 30: PythonCapabilities
30: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-capabilities.py" "-v"
30: Environment variables: 
30:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
30:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib
30:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeCache.txt
30:  LAMMPS_MACHINE_NAME=mpich
30: Test timeout computed to be: 1500
27: testNoArgs (__main__.PythonOpen)
27: Create LAMMPS instance without any arguments ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: Total wall time: 0:00:00
27: ok
27: testUnknownCommand (__main__.PythonOpen) ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: ERROR: Unknown command: write_paper (src/input.cpp:353)
27: Last command: write_paper
27: Total wall time: 0:00:00
27: ok
27: testUnknownCommandInList (__main__.PythonOpen) ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: ERROR: Unknown command: write_paper (src/input.cpp:353)
27: Last command: write_paper
27: Total wall time: 0:00:00
27: ok
27: testWithArgs (__main__.PythonOpen)
27: Create LAMMPS instance with a few arguments ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: Total wall time: 0:00:00
27: ok
27: testWithMPI (__main__.PythonOpen) ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: Total wall time: 0:00:00
27: ok
27: 
27: ----------------------------------------------------------------------
27: Ran 5 tests in 0.300s
27: 
27: OK
27/31 Test #27: PythonOpen .......................   Passed    4.24 sec
test 31
      Start 31: PythonPyLammps
31: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-pylammps.py" "-v"
31: Environment variables: 
31:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
31:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich:/usr/lib64/mpich/lib
31:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/mpich/CMakeCache.txt
31:  LAMMPS_MACHINE_NAME=mpich
31: Test timeout computed to be: 1500
28: Test executing individual commands ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.003 seconds
28: ok
28: Total wall time: 0:00:00
28: testCommandsList (__main__.PythonCommand)
28: Test executing commands from list of strings ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: 
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.000 seconds
28: create_atoms 1 single               0.2 0.1 0.1
28: Created 1 atoms
28:   create_atoms CPU = 0.019 seconds
28: ok
28: Total wall time: 0:00:00
28: testCommandsString (__main__.PythonCommand)
28: Test executing block of commands from string ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: 
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.000 seconds
28: 
28: create_atoms 1 single               0.2 0.1 0.1
28: Created 1 atoms
28:   create_atoms CPU = 0.006 seconds
28: ok
28: Total wall time: 0:00:00
28: testFile (__main__.PythonCommand)
28: Test reading commands from a file ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: 
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.000 seconds
28: 
28: create_atoms 1 single             0.2 0.1 0.1
28: Created 1 atoms
28:   create_atoms CPU = 0.010 seconds
28: ok
28: Total wall time: 0:00:00
28: testNeighborList (__main__.PythonCommand) ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: units lj
28: atom_style atomic
28: atom_modify map array
28: boundary f f f
28: region box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: mass 1 1.0
28: velocity all create 3.0 87287
28: pair_style lj/cut 2.5
28: pair_coeff 1 1 1.0 1.0 2.5
28: neighbor 0.1 bin
28: neigh_modify every 20 delay 0 check no
28: run 0
28: WARNING: No fixes defined, atoms won't move (src/verlet.cpp:54)
28: Neighbor list info ...
28:   update every 20 steps, delay 0 steps, check no
28:   max neighbors/atom: 2000, page size: 100000
28:   master list distance cutoff = 2.6
28:   ghost atom cutoff = 2.6
28:   binsize = 1.3, bins = 2 2 2
28:   1 neighbor lists, perpetual/occasional/extra = 1 0 0
28:   (1) pair lj/cut, perpetual
28:       attributes: half, newton on
28:       pair build: half/bin/atomonly/newton
28:       stencil: half/bin/3d/newton
28:       bin: standard
28: Setting up Verlet run ...
28:   Unit style    : lj
28:   Current step  : 0
28:   Time step     : 0.005
28: Per MPI rank memory allocation (min/avg/max) = 2.413 | 2.413 | 2.413 Mbytes
28: Step Temp E_pair E_mol TotEng Press 
28:        0            3         8064            0      8066.25     8128.375 
28: Loop time of 0.000293255 on 1 procs for 0 steps with 2 atoms
28: 
28: 105.0% CPU use with 1 MPI tasks x 1 OpenMP threads
28: 
28: MPI task timing breakdown:
28: Section |  min time  |  avg time  |  max time  |%varavg| %total
28: ---------------------------------------------------------------
28: Pair    | 0          | 0          | 0          |   0.0 |  0.00
28: Neigh   | 0          | 0          | 0          |   0.0 |  0.00
28: Comm    | 0          | 0          | 0          |   0.0 |  0.00
28: Output  | 0          | 0          | 0          |   0.0 |  0.00
28: Modify  | 0          | 0          | 0          |   0.0 |  0.00
28: Other   |            | 0.0002933  |            |       |100.00
28: 
28: Nlocal:        2.00000 ave           2 max           2 min
28: Histogram: 1 0 0 0 0 0 0 0 0 0
28: Nghost:        0.00000 ave           0 max           0 min
28: Histogram: 1 0 0 0 0 0 0 0 0 0
28: Neighs:        1.00000 ave           1 max           1 min
28: Histogram: 1 0 0 0 0 0 0 0 0 0
28: 
28: Total # of neighbors = 1
28: Ave neighs/atom = 0.5
28: Neighbor list builds = 0
28: Dangerous builds not checked
28: ok
28: Total wall time: 0:00:00
28: testNoFile (__main__.PythonCommand)
28: Test (not) reading commands from no file ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: ok
28: Total wall time: 0:00:00
28: 
28: ----------------------------------------------------------------------
28: Ran 6 tests in 2.365s
28: 
28: OK
28/31 Test #28: PythonCommands ...................   Passed    4.28 sec
30: test_available_id (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
31: test_create_atoms (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
30: fix charge all property/atom q ghost yes
30: region box block 0 1 0 1 0 1
30: create_box 1 box
30: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (1.0000000 1.0000000 1.0000000)
30:   1 by 1 by 1 MPI processor grid
30: group none empty
30: 0 atoms in group none
30: variable test index 1
30: Total wall time: 0:00:00
30: ok
30: test_available_styles (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
31: Total wall time: 0:00:00
31: ok
31: test_runs (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
30: Total wall time: 0:00:00
30: ok
30: test_force_timeout (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: region box block 0 1 0 1 0 1
30: create_box 1 box
30: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (1.0000000 1.0000000 1.0000000)
30:   1 by 1 by 1 MPI processor grid
30: mass * 1.0
30: run 10
30: WARNING: No fixes defined, atoms won't move (src/verlet.cpp:54)
30: Setting up Verlet run ...
30:   Unit style    : lj
30:   Current step  : 0
30:   Time step     : 0.005
30: WARNING: No pairwise cutoff or binsize set. Atom sorting therefore disabled. (src/atom.cpp:2115)
30: WARNING: Communication cutoff is 0.0. No ghost atoms will be generated. Atoms may get lost. (src/comm_brick.cpp:167)
30: Per MPI rank memory allocation (min/avg/max) = 0.04702 | 0.04702 | 0.04702 Mbytes
30: Step Temp E_pair E_mol TotEng Press 
30:        0            0            0            0            0            0 
30:       10            0            0            0            0            0 
30: Loop time of 0.00372028 on 1 procs for 10 steps with 0 atoms
30: 
30: Performance: 1161201.825 tau/day, 2687.967 timesteps/s
30: 100.2% CPU use with 1 MPI tasks x 1 OpenMP threads
30: 
30: MPI task timing breakdown:
30: Section |  min time  |  avg time  |  max time  |%varavg| %total
30: ---------------------------------------------------------------
30: Pair    | 0          | 0          | 0          |   0.0 |  0.00
30: Neigh   | 0          | 0          | 0          |   0.0 |  0.00
30: Comm    | 0.00081015 | 0.00081015 | 0.00081015 |   0.0 | 21.78
30: Output  | 0.00051522 | 0.00051522 | 0.00051522 |   0.0 | 13.85
30: Modify  | 0.00066972 | 0.00066972 | 0.00066972 |   0.0 | 18.00
30: Other   |            | 0.001725   |            |       | 46.37
30: 
30: Nlocal:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Nghost:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Neighs:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: 
30: Total # of neighbors = 0
30: Neighbor list builds = 0
30: Dangerous builds = 0
30: run 10
30: timer timeout off
30: New timer settings: style=normal  mode=nosync  timeout=off
30: run 10
30: WARNING: No fixes defined, atoms won't move (src/verlet.cpp:54)
30: Setting up Verlet run ...
30:   Unit style    : lj
30:   Current step  : 10
30:   Time step     : 0.005
30: WARNING: Communication cutoff is 0.0. No ghost atoms will be generated. Atoms may get lost. (src/comm_brick.cpp:167)
30: Per MPI rank memory allocation (min/avg/max) = 0.04702 | 0.04702 | 0.04702 Mbytes
30: Step Temp E_pair E_mol TotEng Press 
30:       10            0            0            0            0            0 
30:       20            0            0            0            0            0 
30: Loop time of 0.00245404 on 1 procs for 10 steps with 0 atoms
30: 
30: Performance: 1760360.758 tau/day, 4074.909 timesteps/s
30: 0.0% CPU use with 1 MPI tasks x 1 OpenMP threads
30: 
30: MPI task timing breakdown:
30: Section |  min time  |  avg time  |  max time  |%varavg| %total
30: ---------------------------------------------------------------
30: Pair    | 0          | 0          | 0          |   0.0 |  0.00
30: Neigh   | 0          | 0          | 0          |   0.0 |  0.00
30: Comm    | 0.00058317 | 0.00058317 | 0.00058317 |   0.0 | 23.76
30: Output  | 0.00025558 | 0.00025558 | 0.00025558 |   0.0 | 10.41
30: Modify  | 0.0005672  | 0.0005672  | 0.0005672  |   0.0 | 23.11
30: Other   |            | 0.001048   |            |       | 42.71
30: 
30: Nlocal:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Nghost:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Neighs:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: 
30: Total # of neighbors = 0
30: Neighbor list builds = 0
30: Dangerous builds = 0
30: Total wall time: 0:00:00
30: ok
30: test_has_ffmpeg_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_has_gzip_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
31: Total wall time: 0:00:00
31: ok
30: Total wall time: 0:00:00
30: ok
31: test_version (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
31: Total wall time: 0:00:00
31: ok
30: test_has_id (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
31: test_write_script (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
30: fix charge all property/atom q ghost yes
30: region box block 0 1 0 1 0 1
30: create_box 1 box
30: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (1.0000000 1.0000000 1.0000000)
30:   1 by 1 by 1 MPI processor grid
30: group none empty
30: 0 atoms in group none
30: variable test index 1
30: Total wall time: 0:00:00
30: ok
30: test_has_jpeg_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
31: Total wall time: 0:00:00
31: ok
31: 
31: ----------------------------------------------------------------------
31: Ran 4 tests in 1.825s
31: 
31: OK
30: Total wall time: 0:00:00
30: ok
30: test_has_png_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_has_style (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
29/31 Test #31: PythonPyLammps ...................   Passed    3.87 sec
30: Total wall time: 0:00:00
30: ok
30: test_installed_packages (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_is_running (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_version (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: 
30: ----------------------------------------------------------------------
30: Ran 12 tests in 2.320s
30: 
30: OK
30/31 Test #30: PythonCapabilities ...............   Passed    4.68 sec
7: [       OK ] PairUnitConvertTest.tersoff_table (66773 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_zbl
7: [       OK ] PairUnitConvertTest.tersoff_zbl (213 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_zbl_omp
7: [       OK ] PairUnitConvertTest.tersoff_zbl_omp (200 ms)
7: [ RUN      ] PairUnitConvertTest.vashishta
7: [       OK ] PairUnitConvertTest.vashishta (83 ms)
7: [----------] 20 tests from PairUnitConvertTest (76511 ms total)
7: 
7: [----------] Global test environment tear-down
7: [==========] 20 tests from 1 test suite ran. (76518 ms total)
7: [  PASSED  ] 20 tests.
31/31 Test  #7: PairUnitConvert ..................   Passed   77.70 sec
100% tests passed, 0 tests failed out of 31
Total Test time (real) =  79.28 sec
+ cd -
/builddir/build/BUILD/lammps-patch_29Oct2020
+ test -n mpich
+ module unload mpi/mpich-riscv64
++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/mpich-riscv64
+ eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON2_SITEARCH;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_PYTHON_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH
++ unset LD_LIBRARY_PATH
++ unset __LMOD_REF_COUNT_LOADEDMODULES
++ unset LOADEDMODULES
++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1
++ export __LMOD_REF_COUNT_MANPATH
++ MANPATH=/usr/share/lmod/lmod/share/man
++ export MANPATH
++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
++ export MODULEPATH
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON2_SITEARCH
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_PYTHON_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
++ export __LMOD_REF_COUNT_PATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset __LMOD_REF_COUNT__LMFILES_
++ unset _LMFILES_
++ _ModuleTable001_=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
++ export _ModuleTable001_
++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=
++ export _ModuleTable002_
++ _ModuleTable_Sz_=2
++ export _ModuleTable_Sz_
+ export PYTHONPATH=
+ PYTHONPATH=
+ for mpi in '' mpich openmpi
+ old_PYTHONPATH=
+ test -n openmpi
+ module load mpi/openmpi-riscv64
++ /usr/share/lmod/lmod/libexec/lmod sh load mpi/openmpi-riscv64
+ eval '__LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1;' export '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' 'LD_LIBRARY_PATH=/usr/lib64/openmpi/lib;' export 'LD_LIBRARY_PATH;' '__LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-riscv64:1;' export '__LMOD_REF_COUNT_LOADEDMODULES;' 'LOADEDMODULES=mpi/openmpi-riscv64;' export 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/man/openmpi-riscv64:1\;/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=:/usr/share/man/openmpi-riscv64:/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' 'MPI_BIN=/usr/lib64/openmpi/bin;' export 'MPI_BIN;' 'MPI_COMPILER=openmpi-riscv64;' export 'MPI_COMPILER;' 'MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi;' export 'MPI_FORTRAN_MOD_DIR;' 'MPI_HOME=/usr/lib64/openmpi;' export 'MPI_HOME;' 'MPI_INCLUDE=/usr/include/openmpi-riscv64;' export 'MPI_INCLUDE;' 'MPI_LIB=/usr/lib64/openmpi/lib;' export 'MPI_LIB;' 'MPI_MAN=/usr/share/man/openmpi-riscv64;' export 'MPI_MAN;' 'MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi;' export 'MPI_PYTHON3_SITEARCH;' 'MPI_SUFFIX=_openmpi;' export 'MPI_SUFFIX;' 'MPI_SYSCONFIG=/etc/openmpi-riscv64;' export 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/lib64/openmpi/bin:1\;/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig:1\;/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' '__LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-riscv64:1;' export '__LMOD_REF_COUNT__LMFILES_;' '_LMFILES_=/usr/share/modulefiles/mpi/openmpi-riscv64;' export '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=aGFyZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
++ __LMOD_REF_COUNT_LD_LIBRARY_PATH=/usr/lib64/openmpi/lib:1
++ export __LMOD_REF_COUNT_LD_LIBRARY_PATH
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ __LMOD_REF_COUNT_LOADEDMODULES=mpi/openmpi-riscv64:1
++ export __LMOD_REF_COUNT_LOADEDMODULES
++ LOADEDMODULES=mpi/openmpi-riscv64
++ export LOADEDMODULES
++ __LMOD_REF_COUNT_MANPATH='/usr/share/man/openmpi-riscv64:1;/usr/share/lmod/lmod/share/man:1'
++ export __LMOD_REF_COUNT_MANPATH
++ MANPATH=:/usr/share/man/openmpi-riscv64:/usr/share/lmod/lmod/share/man
++ export MANPATH
++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
++ export MODULEPATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ MPI_COMPILER=openmpi-riscv64
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-riscv64
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-riscv64
++ export MPI_MAN
++ MPI_PYTHON3_SITEARCH=/usr/lib64/python3.9/site-packages/openmpi
++ export MPI_PYTHON3_SITEARCH
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-riscv64
++ export MPI_SYSCONFIG
++ __LMOD_REF_COUNT_PATH='/usr/lib64/openmpi/bin:1;/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
++ export __LMOD_REF_COUNT_PATH
++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/openmpi/lib/pkgconfig:1;/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
++ PKG_CONFIG_PATH=/usr/lib64/openmpi/lib/pkgconfig::/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ __LMOD_REF_COUNT__LMFILES_=/usr/share/modulefiles/mpi/openmpi-riscv64:1
++ export __LMOD_REF_COUNT__LMFILES_
++ _LMFILES_=/usr/share/modulefiles/mpi/openmpi-riscv64
++ export _LMFILES_
++ _ModuleTable001_=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
++ export _ModuleTable001_
++ _ModuleTable002_=aGFyZS9tb2R1bGVmaWxlcy9Db3JlIiwiL3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfSxbInN5c3RlbUJhc2VNUEFUSCJdPSIvZXRjL21vZHVsZWZpbGVzOi91c3Ivc2hhcmUvbW9kdWxlZmlsZXM6L3Vzci9zaGFyZS9tb2R1bGVmaWxlcy9MaW51eDovdXNyL3NoYXJlL21vZHVsZWZpbGVzL0NvcmU6L3Vzci9zaGFyZS9sbW9kL2xtb2QvbW9kdWxlZmlsZXMvQ29yZSIsfQ==
++ export _ModuleTable002_
++ _ModuleTable_Sz_=2
++ export _ModuleTable_Sz_
+ export PYTHONPATH=/usr/lib64/python3.9/site-packages/openmpi:
+ PYTHONPATH=/usr/lib64/python3.9/site-packages/openmpi:
+ cd openmpi
+ /usr/bin/ctest --output-on-failure --force-new-ctest-process -j4 --verbose
UpdateCTestConfiguration  from :/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/DartConfiguration.tcl
Parse Config file:/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/DartConfiguration.tcl
UpdateCTestConfiguration  from :/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/DartConfiguration.tcl
Parse Config file:/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/DartConfiguration.tcl
Test project /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi
Constructing a list of tests
Done constructing a list of tests
Updating test list for fixtures
Added 0 tests to meet fixture requirements
Checking test dependency graph...
Checking test dependency graph end
test 1
      Start  1: Tokenizer
1: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/test_tokenizer
1: Test timeout computed to be: 1500
test 2
      Start  2: MemPool
2: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/test_mempool
2: Test timeout computed to be: 1500
test 3
      Start  3: Utils
3: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/test_utils
3: Environment variables: 
3:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
3: Test timeout computed to be: 1500
test 4
      Start  4: FmtLib
4: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/test_fmtlib
4: Test timeout computed to be: 1500
2: Running main() from gmock_main.cc
2: [==========] Running 5 tests from 2 test suites.
4: Running main() from gmock_main.cc
4: [==========] Running 13 tests from 1 test suite.
4: [----------] Global test environment set-up.
4: [----------] 13 tests from FmtLib
4: [ RUN      ] FmtLib.insert_string
2: [----------] Global test environment set-up.
2: [----------] 3 tests from MyPage
3: Running main() from gmock_main.cc
3: [==========] Running 82 tests from 1 test suite.
3: [----------] Global test environment set-up.
3: [----------] 82 tests from Utils
3: [ RUN      ] Utils.trim
2: [ RUN      ] MyPage.int
1: Running main() from gmock_main.cc
1: [==========] Running 22 tests from 2 test suites.
1: [----------] Global test environment set-up.
4: [       OK ] FmtLib.insert_string (31 ms)
4: [ RUN      ] FmtLib.insert_int
1: [----------] 12 tests from Tokenizer
4: [       OK ] FmtLib.insert_int (1 ms)
4: [ RUN      ] FmtLib.insert_neg_int
4: [       OK ] FmtLib.insert_neg_int (0 ms)
4: [ RUN      ] FmtLib.insert_bigint
4: [       OK ] FmtLib.insert_bigint (1 ms)
4: [ RUN      ] FmtLib.insert_neg_bigint
4: [       OK ] FmtLib.insert_neg_bigint (1 ms)
4: [ RUN      ] FmtLib.insert_tagint
4: [  SKIPPED ] FmtLib.insert_tagint (2 ms)
4: [ RUN      ] FmtLib.insert_neg_tagint
4: [  SKIPPED ] FmtLib.insert_neg_tagint (1 ms)
4: [ RUN      ] FmtLib.insert_imageint
4: [  SKIPPED ] FmtLib.insert_imageint (0 ms)
4: [ RUN      ] FmtLib.insert_neg_imageint
4: [  SKIPPED ] FmtLib.insert_neg_imageint (1 ms)
4: [ RUN      ] FmtLib.insert_double
2: [       OK ] MyPage.int (28 ms)
2: [ RUN      ] MyPage.double
3: [       OK ] Utils.trim (29 ms)
3: [ RUN      ] Utils.trim_comment
3: [       OK ] Utils.trim_comment (1 ms)
3: [ RUN      ] Utils.count_words
3: [       OK ] Utils.count_words (1 ms)
3: [ RUN      ] Utils.count_words_string
3: [       OK ] Utils.count_words_string (0 ms)
3: [ RUN      ] Utils.count_words_non_default
3: [       OK ] Utils.count_words_non_default (0 ms)
3: [ RUN      ] Utils.trim_and_count_words
4: [       OK ] FmtLib.insert_double (3 ms)
4: [ RUN      ] FmtLib.insert_neg_double
4: [       OK ] FmtLib.insert_neg_double (1 ms)
4: [ RUN      ] FmtLib.int_for_double
3: [       OK ] Utils.trim_and_count_words (1 ms)
3: [ RUN      ] Utils.count_words_with_extra_spaces
3: [       OK ] Utils.count_words_with_extra_spaces (0 ms)
3: [ RUN      ] Utils.split_words_simple
3: [       OK ] Utils.split_words_simple (2 ms)
3: [ RUN      ] Utils.split_words_quoted
3: [       OK ] Utils.split_words_quoted (0 ms)
3: [ RUN      ] Utils.split_words_escaped
3: [       OK ] Utils.split_words_escaped (0 ms)
3: [ RUN      ] Utils.split_words_quote_in_quoted
3: [       OK ] Utils.split_words_quote_in_quoted (1 ms)
3: [ RUN      ] Utils.valid_integer1
3: [       OK ] Utils.valid_integer1 (1 ms)
3: [ RUN      ] Utils.valid_integer2
3: [       OK ] Utils.valid_integer2 (0 ms)
3: [ RUN      ] Utils.valid_integer3
3: [       OK ] Utils.valid_integer3 (0 ms)
3: [ RUN      ] Utils.valid_double1
3: [       OK ] Utils.valid_double1 (0 ms)
3: [ RUN      ] Utils.valid_double2
3: [       OK ] Utils.valid_double2 (1 ms)
3: [ RUN      ] Utils.valid_double3
3: [       OK ] Utils.valid_double3 (0 ms)
3: [ RUN      ] Utils.valid_double4
3: [       OK ] Utils.valid_double4 (0 ms)
3: [ RUN      ] Utils.valid_double5
3: [       OK ] Utils.valid_double5 (0 ms)
3: [ RUN      ] Utils.valid_double6
3: [       OK ] Utils.valid_double6 (1 ms)
3: [ RUN      ] Utils.valid_double7
3: [       OK ] Utils.valid_double7 (0 ms)
3: [ RUN      ] Utils.valid_double8
3: [       OK ] Utils.valid_double8 (1 ms)
3: [ RUN      ] Utils.valid_double9
3: [       OK ] Utils.valid_double9 (0 ms)
3: [ RUN      ] Utils.empty_not_an_integer
3: [       OK ] Utils.empty_not_an_integer (0 ms)
3: [ RUN      ] Utils.empty_not_a_double
3: [       OK ] Utils.empty_not_a_double (0 ms)
3: [ RUN      ] Utils.text_not_an_integer
3: [       OK ] Utils.text_not_an_integer (0 ms)
3: [ RUN      ] Utils.text_not_a_double
3: [       OK ] Utils.text_not_a_double (0 ms)
3: [ RUN      ] Utils.double_not_an_integer1
3: [       OK ] Utils.double_not_an_integer1 (1 ms)
3: [ RUN      ] Utils.double_not_an_integer2
3: [       OK ] Utils.double_not_an_integer2 (0 ms)
3: [ RUN      ] Utils.double_not_an_integer3
3: [       OK ] Utils.double_not_an_integer3 (0 ms)
3: [ RUN      ] Utils.integer_is_double1
3: [       OK ] Utils.integer_is_double1 (0 ms)
3: [ RUN      ] Utils.integer_is_double2
3: [       OK ] Utils.integer_is_double2 (0 ms)
3: [ RUN      ] Utils.is_double_with_exponential
3: [       OK ] Utils.is_double_with_exponential (0 ms)
3: [ RUN      ] Utils.is_double_with_neg_exponential
3: [       OK ] Utils.is_double_with_neg_exponential (0 ms)
3: [ RUN      ] Utils.is_double_with_pos_exponential
3: [       OK ] Utils.is_double_with_pos_exponential (0 ms)
3: [ RUN      ] Utils.signed_double_and_exponential
3: [       OK ] Utils.signed_double_and_exponential (0 ms)
3: [ RUN      ] Utils.is_double_with_d_exponential
3: [       OK ] Utils.is_double_with_d_exponential (0 ms)
3: [ RUN      ] Utils.is_double_with_neg_d_exponential
3: [       OK ] Utils.is_double_with_neg_d_exponential (0 ms)
3: [ RUN      ] Utils.signed_double_and_d_exponential
3: [       OK ] Utils.signed_double_and_d_exponential (0 ms)
3: [ RUN      ] Utils.strmatch_beg
3: [       OK ] Utils.strmatch_beg (0 ms)
3: [ RUN      ] Utils.strmatch_mid1
3: [       OK ] Utils.strmatch_mid1 (0 ms)
3: [ RUN      ] Utils.strmatch_mid2
3: [       OK ] Utils.strmatch_mid2 (0 ms)
3: [ RUN      ] Utils.strmatch_end
3: [       OK ] Utils.strmatch_end (0 ms)
3: [ RUN      ] Utils.no_strmatch_beg
3: [       OK ] Utils.no_strmatch_beg (1 ms)
3: [ RUN      ] Utils.no_strmatch_mid
3: [       OK ] Utils.no_strmatch_mid (0 ms)
3: [ RUN      ] Utils.no_strmatch_end
3: [       OK ] Utils.no_strmatch_end (1 ms)
3: [ RUN      ] Utils.strmatch_whole_line
2: [       OK ] MyPage.double (15 ms)
2: [ RUN      ] MyPage.bigint
2: [       OK ] MyPage.bigint (2 ms)
2: [----------] 3 tests from MyPage (48 ms total)
2: 
2: [----------] 2 tests from MyPoolChunk
2: [ RUN      ] MyPoolChunk.int
2: [       OK ] MyPoolChunk.int (2 ms)
2: [ RUN      ] MyPoolChunk.double
2: [       OK ] MyPoolChunk.double (2 ms)
2: [----------] 2 tests from MyPoolChunk (4 ms total)
2: 
2: [----------] Global test environment tear-down
2: [==========] 5 tests from 2 test suites ran. (70 ms total)
2: [  PASSED  ] 5 tests.
1: [ RUN      ] Tokenizer.empty_string
1: [       OK ] Tokenizer.empty_string (3 ms)
1: [ RUN      ] Tokenizer.whitespace_only
1: [       OK ] Tokenizer.whitespace_only (1 ms)
1: [ RUN      ] Tokenizer.single_word
3: [       OK ] Utils.strmatch_whole_line (0 ms)
3: [ RUN      ] Utils.no_strmatch_whole_line
3: [       OK ] Utils.no_strmatch_whole_line (1 ms)
3: [ RUN      ] Utils.strmatch_integer_in_line
3: [       OK ] Utils.strmatch_integer_in_line (0 ms)
3: [ RUN      ] Utils.strmatch_float_in_line
3: [       OK ] Utils.strmatch_float_in_line (1 ms)
3: [ RUN      ] Utils.strmatch_int_as_float_in_line
3: [       OK ] Utils.strmatch_int_as_float_in_line (0 ms)
3: [ RUN      ] Utils.strmatch_char_range
3: [       OK ] Utils.strmatch_char_range (1 ms)
3: [ RUN      ] Utils.strmatch_notchar_range
3: [       OK ] Utils.strmatch_notchar_range (1 ms)
3: [ RUN      ] Utils.strmatch_backslash
3: [       OK ] Utils.strmatch_backslash (0 ms)
3: [ RUN      ] Utils.strmatch_opt_range
3: [       OK ] Utils.strmatch_opt_range (0 ms)
3: [ RUN      ] Utils.strmatch_opt_char
3: [       OK ] Utils.strmatch_opt_char (1 ms)
3: [ RUN      ] Utils.strmatch_dot
3: [       OK ] Utils.strmatch_dot (0 ms)
3: [ RUN      ] Utils.strmatch_digit_nondigit
3: [       OK ] Utils.strmatch_digit_nondigit (0 ms)
3: [ RUN      ] Utils.strmatch_integer_noninteger
3: [       OK ] Utils.strmatch_integer_noninteger (0 ms)
3: [ RUN      ] Utils.strmatch_float_nonfloat
3: [       OK ] Utils.strmatch_float_nonfloat (0 ms)
3: [ RUN      ] Utils.strmatch_whitespace_nonwhitespace
3: [       OK ] Utils.strmatch_whitespace_nonwhitespace (1 ms)
3: [ RUN      ] Utils.bounds_case1
3: [       OK ] Utils.bounds_case1 (1 ms)
3: [ RUN      ] Utils.bounds_case2
3: [       OK ] Utils.bounds_case2 (0 ms)
3: [ RUN      ] Utils.bounds_case3
3: [       OK ] Utils.bounds_case3 (0 ms)
3: [ RUN      ] Utils.bounds_case4
3: [       OK ] Utils.bounds_case4 (1 ms)
3: [ RUN      ] Utils.bounds_case5
3: [       OK ] Utils.bounds_case5 (0 ms)
3: [ RUN      ] Utils.boundsbig_case1
4: [       OK ] FmtLib.int_for_double (30 ms)
4: [ RUN      ] FmtLib.double_for_int
4: [       OK ] FmtLib.double_for_int (3 ms)
4: [----------] 13 tests from FmtLib (80 ms total)
4: 
4: [----------] Global test environment tear-down
4: [==========] 13 tests from 1 test suite ran. (85 ms total)
4: [  PASSED  ] 9 tests.
4: [  SKIPPED ] 4 tests, listed below:
4: [  SKIPPED ] FmtLib.insert_tagint
4: [  SKIPPED ] FmtLib.insert_neg_tagint
4: [  SKIPPED ] FmtLib.insert_imageint
4: [  SKIPPED ] FmtLib.insert_neg_imageint
3: [       OK ] Utils.boundsbig_case1 (1 ms)
3: [ RUN      ] Utils.boundsbig_case2
3: [       OK ] Utils.boundsbig_case2 (1 ms)
3: [ RUN      ] Utils.boundsbig_case3
3: [       OK ] Utils.boundsbig_case3 (0 ms)
3: [ RUN      ] Utils.boundsbig_case4
3: [       OK ] Utils.boundsbig_case4 (1 ms)
3: [ RUN      ] Utils.boundsbig_case5
3: [       OK ] Utils.boundsbig_case5 (1 ms)
3: [ RUN      ] Utils.guesspath
3: [       OK ] Utils.guesspath (6 ms)
3: [ RUN      ] Utils.path_join
3: [       OK ] Utils.path_join (1 ms)
3: [ RUN      ] Utils.path_basename
3: [       OK ] Utils.path_basename (5 ms)
3: [ RUN      ] Utils.path_dirname
3: [       OK ] Utils.path_dirname (1 ms)
3: [ RUN      ] Utils.getsyserror
3: [       OK ] Utils.getsyserror (1 ms)
3: [ RUN      ] Utils.potential_file
1: [       OK ] Tokenizer.single_word (31 ms)
1: [ RUN      ] Tokenizer.two_words
1: [       OK ] Tokenizer.two_words (0 ms)
1: [ RUN      ] Tokenizer.prefix_separators
1: [       OK ] Tokenizer.prefix_separators (1 ms)
1: [ RUN      ] Tokenizer.postfix_separators
1: [       OK ] Tokenizer.postfix_separators (1 ms)
1: [ RUN      ] Tokenizer.iterate_words
1: [       OK ] Tokenizer.iterate_words (1 ms)
1: [ RUN      ] Tokenizer.no_separator_path
1: [       OK ] Tokenizer.no_separator_path (0 ms)
1: [ RUN      ] Tokenizer.unix_paths
1: [       OK ] Tokenizer.unix_paths (0 ms)
1: [ RUN      ] Tokenizer.windows_paths
1: [       OK ] Tokenizer.windows_paths (0 ms)
1: [ RUN      ] Tokenizer.default_separators
1: [       OK ] Tokenizer.default_separators (1 ms)
1: [ RUN      ] Tokenizer.as_vector
3: [       OK ] Utils.potential_file (45 ms)
3: [ RUN      ] Utils.unit_conversion
3: [       OK ] Utils.unit_conversion (1 ms)
3: [ RUN      ] Utils.timespec2seconds_ss
 1/31 Test  #2: MemPool ..........................   Passed    1.09 sec
test 5
      Start  5: MathEigen
5: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/utils/test_math_eigen_impl "10" "5"
5: Test timeout computed to be: 1500
3: [       OK ] Utils.timespec2seconds_ss (2 ms)
3: [ RUN      ] Utils.timespec2seconds_mmss
3: [       OK ] Utils.timespec2seconds_mmss (0 ms)
3: [ RUN      ] Utils.timespec2seconds_hhmmss
3: [       OK ] Utils.timespec2seconds_hhmmss (0 ms)
3: [ RUN      ] Utils.date2num
3: [       OK ] Utils.date2num (2 ms)
3: [----------] 82 tests from Utils (144 ms total)
3: 
3: [----------] Global test environment tear-down
3: [==========] 82 tests from 1 test suite ran. (149 ms total)
3: [  PASSED  ] 82 tests.
 2/31 Test  #4: FmtLib ...........................   Passed    1.08 sec
test 6
      Start  6: AtomStyles
6: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/test_atom_styles
6: Test timeout computed to be: 1500
1: [       OK ] Tokenizer.as_vector (42 ms)
1: [----------] 12 tests from Tokenizer (91 ms total)
1: 
1: [----------] 10 tests from ValueTokenizer
1: [ RUN      ] ValueTokenizer.empty_string
1: [       OK ] ValueTokenizer.empty_string (0 ms)
1: [ RUN      ] ValueTokenizer.bad_integer
1: [       OK ] ValueTokenizer.bad_integer (31 ms)
1: [ RUN      ] ValueTokenizer.bad_double
1: [       OK ] ValueTokenizer.bad_double (2 ms)
1: [ RUN      ] ValueTokenizer.valid_int
1: [       OK ] ValueTokenizer.valid_int (1 ms)
1: [ RUN      ] ValueTokenizer.valid_tagint
1: [       OK ] ValueTokenizer.valid_tagint (1 ms)
1: [ RUN      ] ValueTokenizer.valid_bigint
1: [       OK ] ValueTokenizer.valid_bigint (0 ms)
1: [ RUN      ] ValueTokenizer.valid_double
1: [       OK ] ValueTokenizer.valid_double (2 ms)
1: [ RUN      ] ValueTokenizer.valid_double_with_exponential
1: [       OK ] ValueTokenizer.valid_double_with_exponential (1 ms)
1: [ RUN      ] ValueTokenizer.contains
1: [       OK ] ValueTokenizer.contains (17 ms)
1: [ RUN      ] ValueTokenizer.not_contains
1: [       OK ] ValueTokenizer.not_contains (1 ms)
1: [----------] 10 tests from ValueTokenizer (59 ms total)
1: 
1: [----------] Global test environment tear-down
1: [==========] 22 tests from 2 test suites ran. (217 ms total)
1: [  PASSED  ] 22 tests.
 3/31 Test  #3: Utils ............................   Passed    1.18 sec
test 7
      Start  7: PairUnitConvert
7: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/test_pair_unit_convert
7: Environment variables: 
7:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
7: Test timeout computed to be: 1500
 4/31 Test  #1: Tokenizer ........................   Passed    1.35 sec
test 8
      Start  8: PotentialFileReader
8: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/test_potential_file_reader
8: Environment variables: 
8:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
8: Test timeout computed to be: 1500
5: 
5: -- Diagonalization test (real symmetric)  --
5: test passed
5: 
 5/31 Test  #5: MathEigen ........................   Passed    0.22 sec
test 9
      Start  9: EIMPotentialFileReader
9: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/test_eim_potential_file_reader
9: Environment variables: 
9:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
9: Test timeout computed to be: 1500
6: [==========] Running 12 tests from 1 test suite.
6: [----------] Global test environment set-up.
6: [----------] 12 tests from AtomStyleTest
6: [ RUN      ] AtomStyleTest.atomic
9: [==========] Running 5 tests from 1 test suite.
9: [----------] Global test environment set-up.
7: [==========] Running 20 tests from 1 test suite.
7: [----------] Global test environment set-up.
7: [----------] 20 tests from PairUnitConvertTest
7: [ RUN      ] PairUnitConvertTest.zero
9: [----------] 5 tests from EIMPotentialFileReaderTest
9: [ RUN      ] EIMPotentialFileReaderTest.global_line
8: [==========] Running 15 tests from 1 test suite.
8: [----------] Global test environment set-up.
8: [----------] 15 tests from PotentialFileReaderTest
8: [ RUN      ] PotentialFileReaderTest.Sw_native
8: [       OK ] PotentialFileReaderTest.Sw_native (244 ms)
8: [ RUN      ] PotentialFileReaderTest.Sw_conv
9: [       OK ] EIMPotentialFileReaderTest.global_line (426 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.element_line_sequential
8: [       OK ] PotentialFileReaderTest.Sw_conv (185 ms)
8: [ RUN      ] PotentialFileReaderTest.Sw_noconv
8: [       OK ] PotentialFileReaderTest.Sw_noconv (64 ms)
8: [ RUN      ] PotentialFileReaderTest.Comb
8: [       OK ] PotentialFileReaderTest.Comb (24 ms)
8: [ RUN      ] PotentialFileReaderTest.Comb3
9: [       OK ] EIMPotentialFileReaderTest.element_line_sequential (113 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.element_line_random
6: [       OK ] AtomStyleTest.atomic (600 ms)
6: [ RUN      ] AtomStyleTest.charge
8: [       OK ] PotentialFileReaderTest.Comb3 (47 ms)
8: [ RUN      ] PotentialFileReaderTest.Tersoff
7: [       OK ] PairUnitConvertTest.zero (610 ms)
7: [ RUN      ] PairUnitConvertTest.lj_cut
8: [       OK ] PotentialFileReaderTest.Tersoff (25 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffMod
9: [       OK ] EIMPotentialFileReaderTest.element_line_random (88 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.pair_line
8: [       OK ] PotentialFileReaderTest.TersoffMod (26 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffModC
8: [       OK ] PotentialFileReaderTest.TersoffModC (25 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffTable
8: [       OK ] PotentialFileReaderTest.TersoffTable (25 ms)
8: [ RUN      ] PotentialFileReaderTest.TersoffZBL
9: [       OK ] EIMPotentialFileReaderTest.pair_line (71 ms)
9: [ RUN      ] EIMPotentialFileReaderTest.pair_identical
8: [       OK ] PotentialFileReaderTest.TersoffZBL (30 ms)
8: [ RUN      ] PotentialFileReaderTest.GW
6: [       OK ] AtomStyleTest.charge (157 ms)
6: [ RUN      ] AtomStyleTest.sphere
8: [       OK ] PotentialFileReaderTest.GW (30 ms)
8: [ RUN      ] PotentialFileReaderTest.GWZBL
9: [       OK ] EIMPotentialFileReaderTest.pair_identical (58 ms)
9: [----------] 5 tests from EIMPotentialFileReaderTest (758 ms total)
9: 
9: [----------] Global test environment tear-down
9: [==========] 5 tests from 1 test suite ran. (797 ms total)
9: [  PASSED  ] 5 tests.
8: [       OK ] PotentialFileReaderTest.GWZBL (36 ms)
8: [ RUN      ] PotentialFileReaderTest.Nb3bHarmonic
8: [       OK ] PotentialFileReaderTest.Nb3bHarmonic (26 ms)
8: [ RUN      ] PotentialFileReaderTest.Vashishta
8: [       OK ] PotentialFileReaderTest.Vashishta (25 ms)
8: [ RUN      ] PotentialFileReaderTest.UnitConvert
6: [       OK ] AtomStyleTest.sphere (118 ms)
6: [ RUN      ] AtomStyleTest.ellipsoid
8: [       OK ] PotentialFileReaderTest.UnitConvert (40 ms)
8: [----------] 15 tests from PotentialFileReaderTest (876 ms total)
8: 
8: [----------] Global test environment tear-down
8: [==========] 15 tests from 1 test suite ran. (886 ms total)
8: [  PASSED  ] 15 tests.
7: [       OK ] PairUnitConvertTest.lj_cut (331 ms)
7: [ RUN      ] PairUnitConvertTest.eam
6: [       OK ] AtomStyleTest.ellipsoid (138 ms)
6: [ RUN      ] AtomStyleTest.line
7: [       OK ] PairUnitConvertTest.eam (129 ms)
7: [ RUN      ] PairUnitConvertTest.eam_alloy
6: [       OK ] AtomStyleTest.line (107 ms)
6: [ RUN      ] AtomStyleTest.tri
 6/31 Test  #9: EIMPotentialFileReader ...........   Passed    4.53 sec
test 10
      Start 10: FileOperations
10: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/test_file_operations
10: Test timeout computed to be: 1500
 7/31 Test  #8: PotentialFileReader ..............   Passed    4.69 sec
test 11
      Start 11: DumpAtom
11: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/test_dump_atom
11: Environment variables: 
11:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
11: Test timeout computed to be: 1500
6: [       OK ] AtomStyleTest.tri (112 ms)
6: [ RUN      ] AtomStyleTest.body_nparticle
6: [       OK ] AtomStyleTest.body_nparticle (138 ms)
6: [ RUN      ] AtomStyleTest.template
7: [       OK ] PairUnitConvertTest.eam_alloy (450 ms)
7: [ RUN      ] PairUnitConvertTest.eam_fs
6: [       OK ] AtomStyleTest.template (178 ms)
6: [ RUN      ] AtomStyleTest.template_charge
6: [       OK ] AtomStyleTest.template_charge (151 ms)
6: [ RUN      ] AtomStyleTest.bond
6: [       OK ] AtomStyleTest.bond (155 ms)
6: [ RUN      ] AtomStyleTest.angle
6: [       OK ] AtomStyleTest.angle (152 ms)
6: [ RUN      ] AtomStyleTest.full_ellipsoid
6: [       OK ] AtomStyleTest.full_ellipsoid (169 ms)
6: [----------] 12 tests from AtomStyleTest (2188 ms total)
6: 
6: [----------] Global test environment tear-down
6: [==========] 12 tests from 1 test suite ran. (2196 ms total)
6: [  PASSED  ] 12 tests.
 8/31 Test  #6: AtomStyles .......................   Passed    6.06 sec
test 12
      Start 12: DumpCustom
12: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/test_dump_custom
12: Environment variables: 
12:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
12: Test timeout computed to be: 1500
7: [       OK ] PairUnitConvertTest.eam_fs (2220 ms)
7: [ RUN      ] PairUnitConvertTest.eam_cd
10: [==========] Running 3 tests from 1 test suite.
10: [----------] Global test environment set-up.
10: [----------] 3 tests from FileOperationsTest
10: [ RUN      ] FileOperationsTest.safe_fgets
11: [==========] Running 31 tests from 1 test suite.
11: [----------] Global test environment set-up.
11: [----------] 31 tests from DumpAtomTest
11: [ RUN      ] DumpAtomTest.run0
10: [       OK ] FileOperationsTest.safe_fgets (244 ms)
10: [ RUN      ] FileOperationsTest.safe_fread
10: [       OK ] FileOperationsTest.safe_fread (67 ms)
10: [ RUN      ] FileOperationsTest.logmesg
10: [       OK ] FileOperationsTest.logmesg (30 ms)
10: [----------] 3 tests from FileOperationsTest (343 ms total)
10: 
10: [----------] Global test environment tear-down
10: [==========] 3 tests from 1 test suite ran. (349 ms total)
10: [  PASSED  ] 3 tests.
11: [       OK ] DumpAtomTest.run0 (333 ms)
11: [ RUN      ] DumpAtomTest.format_line_run0
11: [       OK ] DumpAtomTest.format_line_run0 (121 ms)
11: [ RUN      ] DumpAtomTest.no_scale_run0
7: [       OK ] PairUnitConvertTest.eam_cd (776 ms)
7: [ RUN      ] PairUnitConvertTest.eim
11: [       OK ] DumpAtomTest.no_scale_run0 (68 ms)
11: [ RUN      ] DumpAtomTest.no_buffer_no_scale_run0
 9/31 Test #10: FileOperations ...................   Passed    3.40 sec
test 13
      Start 13: DumpCfg
13: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/formats/test_dump_cfg
13: Environment variables: 
13:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
13: Test timeout computed to be: 1500
11: [       OK ] DumpAtomTest.no_buffer_no_scale_run0 (66 ms)
11: [ RUN      ] DumpAtomTest.no_buffer_with_scale_run0
11: [       OK ] DumpAtomTest.no_buffer_with_scale_run0 (49 ms)
11: [ RUN      ] DumpAtomTest.with_image_run0
11: [       OK ] DumpAtomTest.with_image_run0 (76 ms)
11: [ RUN      ] DumpAtomTest.with_units_run0
11: [       OK ] DumpAtomTest.with_units_run0 (42 ms)
11: [ RUN      ] DumpAtomTest.with_time_run0
11: [       OK ] DumpAtomTest.with_time_run0 (40 ms)
11: [ RUN      ] DumpAtomTest.with_units_run1
11: [       OK ] DumpAtomTest.with_units_run1 (46 ms)
11: [ RUN      ] DumpAtomTest.no_buffer_with_scale_and_image_run0
11: [       OK ] DumpAtomTest.no_buffer_with_scale_and_image_run0 (41 ms)
11: [ RUN      ] DumpAtomTest.triclinic_run0
11: [       OK ] DumpAtomTest.triclinic_run0 (48 ms)
11: [ RUN      ] DumpAtomTest.triclinic_with_units_run0
11: [       OK ] DumpAtomTest.triclinic_with_units_run0 (42 ms)
11: [ RUN      ] DumpAtomTest.triclinic_with_time_run0
11: [       OK ] DumpAtomTest.triclinic_with_time_run0 (42 ms)
11: [ RUN      ] DumpAtomTest.triclinic_with_image_run0
11: [       OK ] DumpAtomTest.triclinic_with_image_run0 (56 ms)
11: [ RUN      ] DumpAtomTest.binary_run0
11: [  SKIPPED ] DumpAtomTest.binary_run0 (30 ms)
11: [ RUN      ] DumpAtomTest.binary_with_units_run0
12: [==========] Running 9 tests from 1 test suite.
12: [----------] Global test environment set-up.
12: [----------] 9 tests from DumpCustomTest
12: [ RUN      ] DumpCustomTest.run1
11: [  SKIPPED ] DumpAtomTest.binary_with_units_run0 (28 ms)
11: [ RUN      ] DumpAtomTest.binary_with_time_run0
11: [  SKIPPED ] DumpAtomTest.binary_with_time_run0 (26 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_run0 (25 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_with_units_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_units_run0 (27 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_with_time_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_time_run0 (28 ms)
11: [ RUN      ] DumpAtomTest.binary_triclinic_with_image_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_image_run0 (28 ms)
11: [ RUN      ] DumpAtomTest.run1
11: [       OK ] DumpAtomTest.run1 (44 ms)
11: [ RUN      ] DumpAtomTest.run2
11: [       OK ] DumpAtomTest.run2 (49 ms)
11: [ RUN      ] DumpAtomTest.multi_file_run1
11: [       OK ] DumpAtomTest.multi_file_run1 (47 ms)
11: [ RUN      ] DumpAtomTest.per_processor_file_run1
11: [       OK ] DumpAtomTest.per_processor_file_run1 (46 ms)
11: [ RUN      ] DumpAtomTest.per_processor_multi_file_run1
11: [       OK ] DumpAtomTest.per_processor_multi_file_run1 (46 ms)
11: [ RUN      ] DumpAtomTest.dump_modify_scale_invalid
12: [       OK ] DumpCustomTest.run1 (405 ms)
12: [ RUN      ] DumpCustomTest.thresh_run0
11: [       OK ] DumpAtomTest.dump_modify_scale_invalid (69 ms)
11: [ RUN      ] DumpAtomTest.dump_modify_image_invalid
11: [       OK ] DumpAtomTest.dump_modify_image_invalid (32 ms)
11: [ RUN      ] DumpAtomTest.dump_modify_invalid
11: [       OK ] DumpAtomTest.dump_modify_invalid (31 ms)
11: [ RUN      ] DumpAtomTest.write_dump
12: [       OK ] DumpCustomTest.thresh_run0 (142 ms)
12: [ RUN      ] DumpCustomTest.compute_run0
11: [       OK ] DumpAtomTest.write_dump (46 ms)
11: [ RUN      ] DumpAtomTest.binary_write_dump
11: [  SKIPPED ] DumpAtomTest.binary_write_dump (25 ms)
11: [----------] 31 tests from DumpAtomTest (1769 ms total)
11: 
11: [----------] Global test environment tear-down
11: [==========] 31 tests from 1 test suite ran. (1783 ms total)
11: [  PASSED  ] 23 tests.
11: [  SKIPPED ] 8 tests, listed below:
11: [  SKIPPED ] DumpAtomTest.binary_run0
11: [  SKIPPED ] DumpAtomTest.binary_with_units_run0
11: [  SKIPPED ] DumpAtomTest.binary_with_time_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_units_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_time_run0
11: [  SKIPPED ] DumpAtomTest.binary_triclinic_with_image_run0
11: [  SKIPPED ] DumpAtomTest.binary_write_dump
12: [       OK ] DumpCustomTest.compute_run0 (98 ms)
12: [ RUN      ] DumpCustomTest.fix_run0
10/31 Test #11: DumpAtom .........................   Passed    4.83 sec
test 14
      Start 14: SimpleCommands
14: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/test_simple_commands
14: Test timeout computed to be: 1500
12: [       OK ] DumpCustomTest.fix_run0 (399 ms)
12: [ RUN      ] DumpCustomTest.custom_run0
12: [       OK ] DumpCustomTest.custom_run0 (49 ms)
12: [ RUN      ] DumpCustomTest.binary_run1
12: [  SKIPPED ] DumpCustomTest.binary_run1 (34 ms)
12: [ RUN      ] DumpCustomTest.triclinic_run1
12: [       OK ] DumpCustomTest.triclinic_run1 (58 ms)
12: [ RUN      ] DumpCustomTest.binary_triclinic_run1
12: [  SKIPPED ] DumpCustomTest.binary_triclinic_run1 (25 ms)
12: [ RUN      ] DumpCustomTest.with_variable_run1
12: [       OK ] DumpCustomTest.with_variable_run1 (47 ms)
12: [----------] 9 tests from DumpCustomTest (1266 ms total)
12: 
12: [----------] Global test environment tear-down
12: [==========] 9 tests from 1 test suite ran. (1278 ms total)
12: [  PASSED  ] 7 tests.
12: [  SKIPPED ] 2 tests, listed below:
12: [  SKIPPED ] DumpCustomTest.binary_run1
12: [  SKIPPED ] DumpCustomTest.binary_triclinic_run1
11/31 Test #12: DumpCustom .......................   Passed    4.31 sec
test 15
      Start 15: LatticeRegion
15: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/test_lattice_region
15: Test timeout computed to be: 1500
13: [==========] Running 6 tests from 1 test suite.
13: [----------] Global test environment set-up.
13: [----------] 6 tests from DumpCfgTest
13: [ RUN      ] DumpCfgTest.invalid_options
7: [       OK ] PairUnitConvertTest.eim (2937 ms)
7: [ RUN      ] PairUnitConvertTest.gw
13: [       OK ] DumpCfgTest.invalid_options (282 ms)
13: [ RUN      ] DumpCfgTest.require_multifile
7: [       OK ] PairUnitConvertTest.gw (108 ms)
7: [ RUN      ] PairUnitConvertTest.gw_zbl
13: [       OK ] DumpCfgTest.require_multifile (75 ms)
13: [ RUN      ] DumpCfgTest.run0
7: [       OK ] PairUnitConvertTest.gw_zbl (82 ms)
7: [ RUN      ] PairUnitConvertTest.nb3b_harmonic
7: [       OK ] PairUnitConvertTest.nb3b_harmonic (436 ms)
7: [ RUN      ] PairUnitConvertTest.sw
7: [       OK ] PairUnitConvertTest.sw (67 ms)
7: [ RUN      ] PairUnitConvertTest.table_metal2real
13: [       OK ] DumpCfgTest.run0 (916 ms)
13: [ RUN      ] DumpCfgTest.unwrap_run0
13: [       OK ] DumpCfgTest.unwrap_run0 (174 ms)
13: [ RUN      ] DumpCfgTest.no_buffer_run0
13: [       OK ] DumpCfgTest.no_buffer_run0 (52 ms)
13: [ RUN      ] DumpCfgTest.no_unwrap_no_buffer_run0
13: [       OK ] DumpCfgTest.no_unwrap_no_buffer_run0 (91 ms)
13: [----------] 6 tests from DumpCfgTest (1616 ms total)
13: 
13: [----------] Global test environment tear-down
13: [==========] 6 tests from 1 test suite ran. (1635 ms total)
13: [  PASSED  ] 6 tests.
7: [       OK ] PairUnitConvertTest.table_metal2real (441 ms)
7: [ RUN      ] PairUnitConvertTest.table_real2metal
12/31 Test #13: DumpCfg ..........................   Passed    4.70 sec
test 16
      Start 16: KimCommands
16: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/test_kim_commands
16: Test timeout computed to be: 1500
7: [       OK ] PairUnitConvertTest.table_real2metal (422 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff
7: [       OK ] PairUnitConvertTest.tersoff (77 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_mod
7: [       OK ] PairUnitConvertTest.tersoff_mod (67 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_mod_c
14: [==========] Running 10 tests from 1 test suite.
14: [----------] Global test environment set-up.
14: [----------] 10 tests from SimpleCommandsTest
14: [ RUN      ] SimpleCommandsTest.UnknownCommand
7: [       OK ] PairUnitConvertTest.tersoff_mod_c (66 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_table
15: [==========] Running 20 tests from 1 test suite.
15: [----------] Global test environment set-up.
15: [----------] 20 tests from LatticeRegionTest
15: [ RUN      ] LatticeRegionTest.lattice_none
14: [       OK ] SimpleCommandsTest.UnknownCommand (289 ms)
14: [ RUN      ] SimpleCommandsTest.Echo
14: [       OK ] SimpleCommandsTest.Echo (137 ms)
14: [ RUN      ] SimpleCommandsTest.Log
14: [       OK ] SimpleCommandsTest.Log (86 ms)
14: [ RUN      ] SimpleCommandsTest.Quit
15: [       OK ] LatticeRegionTest.lattice_none (283 ms)
15: [ RUN      ] LatticeRegionTest.lattice_sc
14: [  SKIPPED ] SimpleCommandsTest.Quit (38 ms)
14: [ RUN      ] SimpleCommandsTest.ResetTimestep
14: [       OK ] SimpleCommandsTest.ResetTimestep (79 ms)
15: [       OK ] LatticeRegionTest.lattice_sc (139 ms)
15: [ RUN      ] LatticeRegionTest.lattice_bcc
14: [ RUN      ] SimpleCommandsTest.Suffix
15: [       OK ] LatticeRegionTest.lattice_bcc (31 ms)
15: [ RUN      ] LatticeRegionTest.lattice_fcc
15: [       OK ] LatticeRegionTest.lattice_fcc (47 ms)
15: [ RUN      ] LatticeRegionTest.lattice_hcp
14: [       OK ] SimpleCommandsTest.Suffix (92 ms)
14: [ RUN      ] SimpleCommandsTest.Thermo
15: [       OK ] LatticeRegionTest.lattice_hcp (41 ms)
15: [ RUN      ] LatticeRegionTest.lattice_diamond
15: [       OK ] LatticeRegionTest.lattice_diamond (31 ms)
15: [ RUN      ] LatticeRegionTest.lattice_sq
15: [       OK ] LatticeRegionTest.lattice_sq (36 ms)
15: [ RUN      ] LatticeRegionTest.lattice_sq2
14: [       OK ] SimpleCommandsTest.Thermo (76 ms)
14: [ RUN      ] SimpleCommandsTest.TimeStep
14: [       OK ] SimpleCommandsTest.TimeStep (49 ms)
14: [ RUN      ] SimpleCommandsTest.Units
15: [       OK ] LatticeRegionTest.lattice_sq2 (101 ms)
15: [ RUN      ] LatticeRegionTest.lattice_hex
15: [       OK ] LatticeRegionTest.lattice_hex (53 ms)
15: [ RUN      ] LatticeRegionTest.lattice_custom
14: [       OK ] SimpleCommandsTest.Units (100 ms)
14: [ RUN      ] SimpleCommandsTest.Shell
15: [       OK ] LatticeRegionTest.lattice_custom (78 ms)
15: [ RUN      ] LatticeRegionTest.region_fail
14: [       OK ] SimpleCommandsTest.Shell (74 ms)
14: [----------] 10 tests from SimpleCommandsTest (1088 ms total)
14: 
14: [----------] Global test environment tear-down
14: [==========] 10 tests from 1 test suite ran. (1103 ms total)
14: [  PASSED  ] 9 tests.
14: [  SKIPPED ] 1 test, listed below:
14: [  SKIPPED ] SimpleCommandsTest.Quit
15: [       OK ] LatticeRegionTest.region_fail (118 ms)
15: [ RUN      ] LatticeRegionTest.region_block_lattice
15: [       OK ] LatticeRegionTest.region_block_lattice (91 ms)
15: [ RUN      ] LatticeRegionTest.region_block_box
15: [       OK ] LatticeRegionTest.region_block_box (42 ms)
15: [ RUN      ] LatticeRegionTest.region_cone
15: [       OK ] LatticeRegionTest.region_cone (58 ms)
15: [ RUN      ] LatticeRegionTest.region_cylinder
15: [       OK ] LatticeRegionTest.region_cylinder (66 ms)
15: [ RUN      ] LatticeRegionTest.region_prism
15: [       OK ] LatticeRegionTest.region_prism (28 ms)
15: [ RUN      ] LatticeRegionTest.region_sphere
15: [       OK ] LatticeRegionTest.region_sphere (27 ms)
15: [ RUN      ] LatticeRegionTest.region_union
15: [       OK ] LatticeRegionTest.region_union (30 ms)
15: [ RUN      ] LatticeRegionTest.region_intersect
13/31 Test #14: SimpleCommands ...................   Passed    4.97 sec
test 17
      Start 17: ResetIDs
17: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/commands/test_reset_ids
17: Test timeout computed to be: 1500
15: [       OK ] LatticeRegionTest.region_intersect (62 ms)
15: [ RUN      ] LatticeRegionTest.region_plane
15: [       OK ] LatticeRegionTest.region_plane (61 ms)
15: [----------] 20 tests from LatticeRegionTest (1428 ms total)
15: 
15: [----------] Global test environment tear-down
15: [==========] 20 tests from 1 test suite ran. (1440 ms total)
15: [  PASSED  ] 20 tests.
14/31 Test #15: LatticeRegion ....................   Passed    4.82 sec
test 18
      Start 18: LibraryOpen
18: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/test_library_open
18: Test timeout computed to be: 1500
16: [==========] Running 4 tests from 1 test suite.
16: [----------] Global test environment set-up.
16: [----------] 4 tests from KimCommandsTest
16: [ RUN      ] KimCommandsTest.kim_init
16: [       OK ] KimCommandsTest.kim_init (398 ms)
16: [ RUN      ] KimCommandsTest.kim_interactions
16: [       OK ] KimCommandsTest.kim_interactions (629 ms)
16: [ RUN      ] KimCommandsTest.kim_param
17: [==========] Running 7 tests from 2 test suites.
17: [----------] Global test environment set-up.
17: [----------] 6 tests from ResetIDsTest
17: [ RUN      ] ResetIDsTest.MolIDAll
17: [       OK ] ResetIDsTest.MolIDAll (418 ms)
17: [ RUN      ] ResetIDsTest.DeletePlusAtomID
17: [       OK ] ResetIDsTest.DeletePlusAtomID (127 ms)
17: [ RUN      ] ResetIDsTest.PartialOffset
17: [       OK ] ResetIDsTest.PartialOffset (73 ms)
17: [ RUN      ] ResetIDsTest.DeleteAdd
18: [==========] Running 6 tests from 3 test suites.
18: [----------] Global test environment set-up.
18: [----------] 3 tests from lammps_open
18: [ RUN      ] lammps_open.null_args
17: [       OK ] ResetIDsTest.DeleteAdd (105 ms)
17: [ RUN      ] ResetIDsTest.TopologyData
17: [       OK ] ResetIDsTest.TopologyData (96 ms)
17: [ RUN      ] ResetIDsTest.DeathTests
18: [       OK ] lammps_open.null_args (206 ms)
18: [ RUN      ] lammps_open.with_args
18: Using a 'void **' argument to return the LAMMPS handle is deprecated.  Please use the return value instead.
18: [       OK ] lammps_open.with_args (55 ms)
18: [ RUN      ] lammps_open.with_kokkos
18: [  SKIPPED ] lammps_open.with_kokkos (2 ms)
18: [----------] 3 tests from lammps_open (266 ms total)
18: 
18: [----------] 2 tests from lammps_open_no_mpi
18: [ RUN      ] lammps_open_no_mpi.no_screen
18: [       OK ] lammps_open_no_mpi.no_screen (24 ms)
18: [ RUN      ] lammps_open_no_mpi.with_omp
17: [       OK ] ResetIDsTest.DeathTests (147 ms)
17: [----------] 6 tests from ResetIDsTest (970 ms total)
17: 
17: [----------] 1 test from ResetMolIds
17: [ RUN      ] ResetMolIds.CMDFail
18: [       OK ] lammps_open_no_mpi.with_omp (55 ms)
18: [----------] 2 tests from lammps_open_no_mpi (80 ms total)
18: 
18: [----------] 1 test from lammps_open_fortran
18: [ RUN      ] lammps_open_fortran.no_args
18: [       OK ] lammps_open_fortran.no_args (28 ms)
18: [----------] 1 test from lammps_open_fortran (29 ms total)
18: 
18: [----------] Global test environment tear-down
18: [==========] 6 tests from 3 test suites ran. (383 ms total)
18: [  PASSED  ] 5 tests.
18: [  SKIPPED ] 1 test, listed below:
18: [  SKIPPED ] lammps_open.with_kokkos
17: [       OK ] ResetMolIds.CMDFail (90 ms)
17: [----------] 1 test from ResetMolIds (91 ms total)
17: 
17: [----------] Global test environment tear-down
17: [==========] 7 tests from 2 test suites ran. (1069 ms total)
17: [  PASSED  ] 7 tests.
15/31 Test #18: LibraryOpen ......................   Passed    3.37 sec
test 19
      Start 19: LibraryCommands
19: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/test_library_commands
19: Test timeout computed to be: 1500
16/31 Test #17: ResetIDs .........................   Passed    3.96 sec
test 20
      Start 20: LibraryProperties
20: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/test_library_properties
20: Test timeout computed to be: 1500
16: [       OK ] KimCommandsTest.kim_param (2757 ms)
16: [ RUN      ] KimCommandsTest.kim_property
16: [       OK ] KimCommandsTest.kim_property (644 ms)
16: [----------] 4 tests from KimCommandsTest (4430 ms total)
16: 
16: [----------] Global test environment tear-down
16: [==========] 4 tests from 1 test suite ran. (4439 ms total)
16: [  PASSED  ] 4 tests.
17/31 Test #16: KimCommands ......................   Passed    7.82 sec
test 21
      Start 21: LibraryConfig
21: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/c-library/test_library_config
21: Test timeout computed to be: 1500
19: [==========] Running 4 tests from 1 test suite.
19: [----------] Global test environment set-up.
19: [----------] 4 tests from LibraryCommands
19: [ RUN      ] LibraryCommands.from_file
20: [==========] Running 13 tests from 2 test suites.
20: [----------] Global test environment set-up.
20: [----------] 8 tests from LibraryProperties
20: [ RUN      ] LibraryProperties.version
19: [       OK ] LibraryCommands.from_file (283 ms)
19: [ RUN      ] LibraryCommands.from_line
20: [       OK ] LibraryProperties.version (198 ms)
20: [ RUN      ] LibraryProperties.memory_usage
19: [       OK ] LibraryCommands.from_line (66 ms)
19: [ RUN      ] LibraryCommands.from_list
19: [       OK ] LibraryCommands.from_list (54 ms)
19: [ RUN      ] LibraryCommands.from_string
20: [       OK ] LibraryProperties.memory_usage (101 ms)
20: [ RUN      ] LibraryProperties.get_mpi_comm
19: [       OK ] LibraryCommands.from_string (27 ms)
19: [----------] 4 tests from LibraryCommands (439 ms total)
19: 
19: [----------] Global test environment tear-down
19: [==========] 4 tests from 1 test suite ran. (447 ms total)
19: [  PASSED  ] 4 tests.
20: [       OK ] LibraryProperties.get_mpi_comm (49 ms)
20: [ RUN      ] LibraryProperties.natoms
20: [       OK ] LibraryProperties.natoms (204 ms)
20: [ RUN      ] LibraryProperties.thermo
18/31 Test #19: LibraryCommands ..................   Passed    3.28 sec
test 22
      Start 22: LammpsClass
22: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/cplusplus/test_lammps_class
22: Test timeout computed to be: 1500
20: [       OK ] LibraryProperties.thermo (147 ms)
20: [ RUN      ] LibraryProperties.box
20:   1 by 1 by 1 MPI processor grid
20: [       OK ] LibraryProperties.box (91 ms)
20: [ RUN      ] LibraryProperties.setting
20: [       OK ] LibraryProperties.setting (96 ms)
20: [ RUN      ] LibraryProperties.global
20: [       OK ] LibraryProperties.global (58 ms)
20: [----------] 8 tests from LibraryProperties (948 ms total)
20: 
20: [----------] 5 tests from AtomProperties
20: [ RUN      ] AtomProperties.invalid
20: [       OK ] AtomProperties.invalid (36 ms)
20: [ RUN      ] AtomProperties.mass
20: [       OK ] AtomProperties.mass (25 ms)
20: [ RUN      ] AtomProperties.id
20: [       OK ] AtomProperties.id (25 ms)
20: [ RUN      ] AtomProperties.type
20: [       OK ] AtomProperties.type (29 ms)
20: [ RUN      ] AtomProperties.position
20: [       OK ] AtomProperties.position (28 ms)
20: [----------] 5 tests from AtomProperties (145 ms total)
20: 
20: [----------] Global test environment tear-down
20: [==========] 13 tests from 2 test suites ran. (1099 ms total)
20: [  PASSED  ] 13 tests.
22: Running main() from gmock_main.cc
22: [==========] Running 5 tests from 4 test suites.
22: [----------] Global test environment set-up.
22: [----------] 2 tests from LAMMPS_plain
22: [ RUN      ] LAMMPS_plain.InitMembers
19/31 Test #20: LibraryProperties ................   Passed    3.98 sec
test 23
      Start 23: InputClass
23: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/cplusplus/test_input_class
23: Test timeout computed to be: 1500
23: Running main() from /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/src/gtest_main.cc
23: [==========] Running 3 tests from 1 test suite.
23: [----------] Global test environment set-up.
23: [----------] 3 tests from Input_commands
23: [ RUN      ] Input_commands.from_file
21: [==========] Running 17 tests from 2 test suites.
21: [----------] Global test environment set-up.
21: [----------] 9 tests from LAMMPSConfig
21: [ RUN      ] LAMMPSConfig.package_count
21: [       OK ] LAMMPSConfig.package_count (4 ms)
21: [ RUN      ] LAMMPSConfig.has_package
21: [       OK ] LAMMPSConfig.has_package (5 ms)
21: [ RUN      ] LAMMPSConfig.package_name
21: [       OK ] LAMMPSConfig.package_name (6 ms)
21: [ RUN      ] LAMMPSConfig.exceptions
21: [       OK ] LAMMPSConfig.exceptions (6 ms)
21: [ RUN      ] LAMMPSConfig.mpi_support
21: [       OK ] LAMMPSConfig.mpi_support (0 ms)
21: [ RUN      ] LAMMPSConfig.png_support
21: [       OK ] LAMMPSConfig.png_support (0 ms)
21: [ RUN      ] LAMMPSConfig.jpeg_support
21: [       OK ] LAMMPSConfig.jpeg_support (0 ms)
21: [ RUN      ] LAMMPSConfig.gzip_support
21: [       OK ] LAMMPSConfig.gzip_support (1 ms)
21: [ RUN      ] LAMMPSConfig.ffmpeg_support
21: [       OK ] LAMMPSConfig.ffmpeg_support (0 ms)
21: [----------] 9 tests from LAMMPSConfig (34 ms total)
21: 
21: [----------] 8 tests from LibraryConfig
21: [ RUN      ] LibraryConfig.has_style
21: [       OK ] LibraryConfig.has_style (238 ms)
21: [ RUN      ] LibraryConfig.style_count
21: [       OK ] LibraryConfig.style_count (26 ms)
21: [ RUN      ] LibraryConfig.style_name
21: [       OK ] LibraryConfig.style_name (23 ms)
21: [ RUN      ] LibraryConfig.has_id
21: [       OK ] LibraryConfig.has_id (24 ms)
21: [ RUN      ] LibraryConfig.id_count
21: [       OK ] LibraryConfig.id_count (23 ms)
21: [ RUN      ] LibraryConfig.id_name
21: [       OK ] LibraryConfig.id_name (60 ms)
21: [ RUN      ] LibraryConfig.is_running
21: [       OK ] LibraryConfig.is_running (92 ms)
21: [ RUN      ] LibraryConfig.force_timeout
21: [       OK ] LibraryConfig.force_timeout (24 ms)
21: [----------] 8 tests from LibraryConfig (517 ms total)
21: 
21: [----------] Global test environment tear-down
21: [==========] 17 tests from 2 test suites ran. (567 ms total)
21: [  PASSED  ] 17 tests.
20/31 Test #21: LibraryConfig ....................   Passed    3.70 sec
test 24
      Start 24: FortranOpen
24: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/test_fortran_create
24: Test timeout computed to be: 1500
22: [       OK ] LAMMPS_plain.InitMembers (2420 ms)
22: [ RUN      ] LAMMPS_plain.TestStyles
22: [       OK ] LAMMPS_plain.TestStyles (24 ms)
22: [----------] 2 tests from LAMMPS_plain (2447 ms total)
22: 
22: [----------] 1 test from LAMMPS_omp
22: [ RUN      ] LAMMPS_omp.InitMembers
22: [       OK ] LAMMPS_omp.InitMembers (49 ms)
22: [----------] 1 test from LAMMPS_omp (50 ms total)
22: 
22: [----------] 1 test from LAMMPS_kokkos
22: [ RUN      ] LAMMPS_kokkos.InitMembers
22: [  SKIPPED ] LAMMPS_kokkos.InitMembers (2 ms)
22: [----------] 1 test from LAMMPS_kokkos (3 ms total)
22: 
22: [----------] 1 test from LAMMPS_help
22: [ RUN      ] LAMMPS_help.HelpMessage
24: Running main() from /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/src/gtest_main.cc
24: [==========] Running 4 tests from 2 test suites.
24: [----------] Global test environment set-up.
24: [----------] 2 tests from open_no_mpi
24: [ RUN      ] open_no_mpi.no_args
21/31 Test #22: LammpsClass ......................   Passed    3.50 sec
test 25
      Start 25: FortranCommands
25: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/fortran/test_fortran_commands
25: Test timeout computed to be: 1500
23: region       box block 0 $x 0 2 0 2
23: region       box block 0 2 0 2 0 2
23: create_box 1 box
23: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
23:   1 by 1 by 1 MPI processor grid
23: create_atoms 1 single 1.0 1.0 ${zpos}
23: create_atoms 1 single 1.0 1.0 1.5
23: Created 1 atoms
23:   create_atoms CPU = 0.002 seconds
23: create_atoms 1 single 0.2 0.1 0.1
23: Created 1 atoms
23:   create_atoms CPU = 0.006 seconds
23: [       OK ] Input_commands.from_file (2450 ms)
23: [ RUN      ] Input_commands.from_line
23: region       box block 0 $x 0 2 0 2
23: region       box block 0 2 0 2 0 2
23: create_box 1 box
23: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
23:   1 by 1 by 1 MPI processor grid
23: create_atoms 1 single 1.0 1.0 ${zpos}
23: create_atoms 1 single 1.0 1.0 1.5
23: Created 1 atoms
23:   create_atoms CPU = 0.000 seconds
23: [       OK ] Input_commands.from_line (32 ms)
23: [ RUN      ] Input_commands.substitute
23: [       OK ] Input_commands.substitute (21 ms)
23: [----------] 3 tests from Input_commands (2508 ms total)
23: 
23: [----------] Global test environment tear-down
23: [==========] 3 tests from 1 test suite ran. (2521 ms total)
23: [  PASSED  ] 3 tests.
22/31 Test #23: InputClass .......................   Passed    3.20 sec
test 26
      Start 26: PythonPackage
26: Test command: /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python/test_python_package
26: Environment variables: 
26:  LAMMPS_POTENTIALS=/builddir/build/BUILD/lammps-patch_29Oct2020/potentials
26:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/unittest/python:/builddir/build/BUILD/lammps-patch_29Oct2020/python:
26: Test timeout computed to be: 1500
25: Running main() from /builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/gtest-src/googletest/src/gtest_main.cc
25: [==========] Running 4 tests from 1 test suite.
25: [----------] Global test environment set-up.
25: [----------] 4 tests from LAMMPS_commands
25: [ RUN      ] LAMMPS_commands.from_file
24: Using a 'void **' argument to return the LAMMPS handle is deprecated.  Please use the return value instead.
24: [       OK ] open_no_mpi.no_args (2269 ms)
24: [ RUN      ] open_no_mpi.with_args
24: [       OK ] open_no_mpi.with_args (97 ms)
24: [----------] 2 tests from open_no_mpi (2369 ms total)
24: 
24: [----------] 2 tests from fortran_open
24: [ RUN      ] fortran_open.no_args
24: [       OK ] fortran_open.no_args (45 ms)
24: [ RUN      ] fortran_open.with_args
24: [       OK ] fortran_open.with_args (59 ms)
24: [----------] 2 tests from fortran_open (111 ms total)
24: 
24: [----------] Global test environment tear-down
24: [==========] 4 tests from 2 test suites ran. (2503 ms total)
24: [  PASSED  ] 4 tests.
23/31 Test #24: FortranOpen ......................   Passed    3.27 sec
test 27
      Start 27: PythonOpen
27: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-open.py" "-v"
27: Environment variables: 
27:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
27:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib
27:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeCache.txt
27:  LAMMPS_MACHINE_NAME=openmpi
27: Test timeout computed to be: 1500
25: Using a 'void **' argument to return the LAMMPS handle is deprecated.  Please use the return value instead.
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.002 seconds
25: create_atoms 1 single  0.2 0.1 0.1
25: Created 1 atoms
25:   create_atoms CPU = 0.006 seconds
25: [       OK ] LAMMPS_commands.from_file (2321 ms)
25: [ RUN      ] LAMMPS_commands.from_line
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.000 seconds
25: [       OK ] LAMMPS_commands.from_line (41 ms)
25: [ RUN      ] LAMMPS_commands.from_list
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.000 seconds
25: create_atoms 1 single    0.2 0.1 0.1
25: Created 1 atoms
25:   create_atoms CPU = 0.005 seconds
25: [       OK ] LAMMPS_commands.from_list (75 ms)
25: [ RUN      ] LAMMPS_commands.from_string
25: region       box block 0 $x 0 2 0 2
25: region       box block 0 2 0 2 0 2
25: create_box 1 box
25: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
25:   1 by 1 by 1 MPI processor grid
25: create_atoms 1 single 1.0 1.0 ${zpos}
25: create_atoms 1 single 1.0 1.0 1.5
25: Created 1 atoms
25:   create_atoms CPU = 0.000 seconds
25: create_atoms 1 single    0.2 0.1 0.1
25: Created 1 atoms
25:   create_atoms CPU = 0.006 seconds
25: [       OK ] LAMMPS_commands.from_string (32 ms)
25: [----------] 4 tests from LAMMPS_commands (2486 ms total)
25: 
25: [----------] Global test environment tear-down
25: [==========] 4 tests from 1 test suite ran. (2493 ms total)
25: [  PASSED  ] 4 tests.
24/31 Test #25: FortranCommands ..................   Passed    3.25 sec
test 28
      Start 28: PythonCommands
28: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-commands.py" "-v"
28: Environment variables: 
28:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
28:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib
28:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeCache.txt
28:  LAMMPS_MACHINE_NAME=openmpi
28: Test timeout computed to be: 1500
26: [==========] Running 2 tests from 1 test suite.
26: [----------] Global test environment set-up.
26: [----------] 2 tests from PythonPackageTest
26: [ RUN      ] PythonPackageTest.python_invoke
26: [  SKIPPED ] PythonPackageTest.python_invoke (250 ms)
26: [ RUN      ] PythonPackageTest.python_variable
26: [  SKIPPED ] PythonPackageTest.python_variable (33 ms)
26: [----------] 2 tests from PythonPackageTest (285 ms total)
26: 
26: [----------] Global test environment tear-down
26: [==========] 2 tests from 1 test suite ran. (293 ms total)
26: [  PASSED  ] 0 tests.
26: [  SKIPPED ] 2 tests, listed below:
26: [  SKIPPED ] PythonPackageTest.python_invoke
26: [  SKIPPED ] PythonPackageTest.python_variable
25/31 Test #26: PythonPackage ....................   Passed    3.46 sec
test 29
      Start 29: PythonNumpy
29: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-numpy.py" "-v"
29: Environment variables: 
29:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
29:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib
29:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeCache.txt
29:  LAMMPS_MACHINE_NAME=openmpi
29: Test timeout computed to be: 1500
28: testCommand (__main__.PythonCommand)
29: testExtractAtom (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractAtomDeprecated (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeGlobalArray (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeGlobalScalar (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeGlobalVector (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeLocalArray (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeLocalScalar (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputeLocalVector (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputePerAtomArray (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testExtractComputePerAtomVector (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testLammpsPointer (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: testNeighborList (__main__.PythonNumpy) ... skipped 'numpy is not available'
29: 
29: ----------------------------------------------------------------------
29: Ran 12 tests in 0.035s
29: 
29: OK (skipped=12)
26/31 Test #29: PythonNumpy ......................   Passed    2.08 sec
test 30
      Start 30: PythonCapabilities
30: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-capabilities.py" "-v"
30: Environment variables: 
30:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
30:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib
30:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeCache.txt
30:  LAMMPS_MACHINE_NAME=openmpi
30: Test timeout computed to be: 1500
27: LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: Total wall time: 0:00:00
27: testNoArgs (__main__.PythonOpen)
27: Create LAMMPS instance without any arguments ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: Total wall time: 0:00:00
27: ok
27: testUnknownCommand (__main__.PythonOpen) ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: ERROR: Unknown command: write_paper (src/input.cpp:353)
27: Last command: write_paper
27: Total wall time: 0:00:00
27: ok
27: testUnknownCommandInList (__main__.PythonOpen) ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: ERROR: Unknown command: write_paper (src/input.cpp:353)
27: Last command: write_paper
27: Total wall time: 0:00:00
27: ok
27: testWithArgs (__main__.PythonOpen)
27: Create LAMMPS instance with a few arguments ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: Total wall time: 0:00:00
27: ok
27: testWithMPI (__main__.PythonOpen) ... LAMMPS (29 Oct 2020)
27: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27:   using 1 OpenMP thread(s) per MPI task
27: Total wall time: 0:00:00
27: ok
27: 
27: ----------------------------------------------------------------------
27: Ran 5 tests in 0.380s
27: 
27: OK
28: Test executing individual commands ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.002 seconds
28: ok
28: Total wall time: 0:00:00
28: testCommandsList (__main__.PythonCommand)
28: Test executing commands from list of strings ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
27/31 Test #27: PythonOpen .......................   Passed    6.91 sec
test 31
      Start 31: PythonPyLammps
31: Test command: /usr/bin/python3.9 "-u" "/builddir/build/BUILD/lammps-patch_29Oct2020/unittest/python/python-pylammps.py" "-v"
31: Environment variables: 
31:  PYTHONPATH=/builddir/build/BUILD/lammps-patch_29Oct2020/python:
31:  LD_LIBRARY_PATH=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi:/usr/lib64/openmpi/lib
31:  LAMMPS_CMAKE_CACHE=/builddir/build/BUILD/lammps-patch_29Oct2020/openmpi/CMakeCache.txt
31:  LAMMPS_MACHINE_NAME=openmpi
31: Test timeout computed to be: 1500
28:   using 1 OpenMP thread(s) per MPI task
28: 
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.000 seconds
28: create_atoms 1 single               0.2 0.1 0.1
28: Created 1 atoms
28:   create_atoms CPU = 0.006 seconds
28: ok
28: Total wall time: 0:00:00
28: testCommandsString (__main__.PythonCommand)
28: Test executing block of commands from string ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: 
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.000 seconds
28: 
28: create_atoms 1 single               0.2 0.1 0.1
28: Created 1 atoms
28:   create_atoms CPU = 0.006 seconds
28: ok
28: Total wall time: 0:00:00
28: testFile (__main__.PythonCommand)
28: Test reading commands from a file ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: 
28: region       box block 0 $x 0 2 0 2
28: region       box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: create_atoms 1 single 1.0 1.0 ${zpos}
28: create_atoms 1 single 1.0 1.0 1.5
28: Created 1 atoms
28:   create_atoms CPU = 0.000 seconds
28: 
28: create_atoms 1 single             0.2 0.1 0.1
28: Created 1 atoms
28:   create_atoms CPU = 0.006 seconds
28: ok
28: Total wall time: 0:00:00
28: testNeighborList (__main__.PythonCommand) ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: units lj
28: atom_style atomic
28: atom_modify map array
28: boundary f f f
28: region box block 0 2 0 2 0 2
28: create_box 1 box
28: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (2.0000000 2.0000000 2.0000000)
28:   1 by 1 by 1 MPI processor grid
28: mass 1 1.0
28: velocity all create 3.0 87287
28: pair_style lj/cut 2.5
28: pair_coeff 1 1 1.0 1.0 2.5
28: neighbor 0.1 bin
28: neigh_modify every 20 delay 0 check no
28: run 0
28: WARNING: No fixes defined, atoms won't move (src/verlet.cpp:54)
28: Neighbor list info ...
28:   update every 20 steps, delay 0 steps, check no
28:   max neighbors/atom: 2000, page size: 100000
28:   master list distance cutoff = 2.6
28:   ghost atom cutoff = 2.6
28:   binsize = 1.3, bins = 2 2 2
28:   1 neighbor lists, perpetual/occasional/extra = 1 0 0
28:   (1) pair lj/cut, perpetual
28:       attributes: half, newton on
28:       pair build: half/bin/atomonly/newton
28:       stencil: half/bin/3d/newton
28:       bin: standard
28: Setting up Verlet run ...
28:   Unit style    : lj
28:   Current step  : 0
28:   Time step     : 0.005
28: Per MPI rank memory allocation (min/avg/max) = 2.413 | 2.413 | 2.413 Mbytes
28: Step Temp E_pair E_mol TotEng Press 
28:        0            3         8064            0      8066.25     8128.375 
28: Loop time of 0.0002957 on 1 procs for 0 steps with 2 atoms
28: 
28: 110.6% CPU use with 1 MPI tasks x 1 OpenMP threads
28: 
28: MPI task timing breakdown:
28: Section |  min time  |  avg time  |  max time  |%varavg| %total
28: ---------------------------------------------------------------
28: Pair    | 0          | 0          | 0          |   0.0 |  0.00
28: Neigh   | 0          | 0          | 0          |   0.0 |  0.00
28: Comm    | 0          | 0          | 0          |   0.0 |  0.00
28: Output  | 0          | 0          | 0          |   0.0 |  0.00
28: Modify  | 0          | 0          | 0          |   0.0 |  0.00
28: Other   |            | 0.0002957  |            |       |100.00
28: 
28: Nlocal:        2.00000 ave           2 max           2 min
28: Histogram: 1 0 0 0 0 0 0 0 0 0
28: Nghost:        0.00000 ave           0 max           0 min
28: Histogram: 1 0 0 0 0 0 0 0 0 0
28: Neighs:        1.00000 ave           1 max           1 min
28: Histogram: 1 0 0 0 0 0 0 0 0 0
28: 
28: Total # of neighbors = 1
28: Ave neighs/atom = 0.5
28: Neighbor list builds = 0
28: Dangerous builds not checked
28: ok
28: Total wall time: 0:00:00
28: testNoFile (__main__.PythonCommand)
28: Test (not) reading commands from no file ... LAMMPS (29 Oct 2020)
28: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
28:   using 1 OpenMP thread(s) per MPI task
28: ok
28: Total wall time: 0:00:00
28: 
28: ----------------------------------------------------------------------
28: Ran 6 tests in 4.713s
28: 
28: OK
28/31 Test #28: PythonCommands ...................   Passed    7.02 sec
30: test_available_id (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: fix charge all property/atom q ghost yes
30: region box block 0 1 0 1 0 1
30: create_box 1 box
30: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (1.0000000 1.0000000 1.0000000)
30:   1 by 1 by 1 MPI processor grid
30: group none empty
30: 0 atoms in group none
30: variable test index 1
30: Total wall time: 0:00:00
30: ok
30: test_available_styles (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_force_timeout (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: region box block 0 1 0 1 0 1
30: create_box 1 box
30: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (1.0000000 1.0000000 1.0000000)
30:   1 by 1 by 1 MPI processor grid
30: mass * 1.0
30: run 10
30: WARNING: No fixes defined, atoms won't move (src/verlet.cpp:54)
30: Setting up Verlet run ...
30:   Unit style    : lj
30:   Current step  : 0
30:   Time step     : 0.005
30: WARNING: No pairwise cutoff or binsize set. Atom sorting therefore disabled. (src/atom.cpp:2115)
30: WARNING: Communication cutoff is 0.0. No ghost atoms will be generated. Atoms may get lost. (src/comm_brick.cpp:167)
30: Per MPI rank memory allocation (min/avg/max) = 0.04702 | 0.04702 | 0.04702 Mbytes
30: Step Temp E_pair E_mol TotEng Press 
30:        0            0            0            0            0            0 
30:       10            0            0            0            0            0 
30: Loop time of 0.0045219 on 1 procs for 10 steps with 0 atoms
30: 
30: Performance: 955350.627 tau/day, 2211.460 timesteps/s
30: 86.2% CPU use with 1 MPI tasks x 1 OpenMP threads
30: 
30: MPI task timing breakdown:
30: Section |  min time  |  avg time  |  max time  |%varavg| %total
30: ---------------------------------------------------------------
30: Pair    | 0          | 0          | 0          |   0.0 |  0.00
30: Neigh   | 0          | 0          | 0          |   0.0 |  0.00
30: Comm    | 0.0007577  | 0.0007577  | 0.0007577  |   0.0 | 16.76
30: Output  | 0.0014662  | 0.0014662  | 0.0014662  |   0.0 | 32.42
30: Modify  | 0.0006158  | 0.0006158  | 0.0006158  |   0.0 | 13.62
30: Other   |            | 0.001682   |            |       | 37.20
30: 
30: Nlocal:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Nghost:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Neighs:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: 
30: Total # of neighbors = 0
30: Neighbor list builds = 0
30: Dangerous builds = 0
30: run 10
30: timer timeout off
30: New timer settings: style=normal  mode=nosync  timeout=off
30: run 10
30: WARNING: No fixes defined, atoms won't move (src/verlet.cpp:54)
30: Setting up Verlet run ...
30:   Unit style    : lj
30:   Current step  : 10
30:   Time step     : 0.005
30: WARNING: Communication cutoff is 0.0. No ghost atoms will be generated. Atoms may get lost. (src/comm_brick.cpp:167)
30: Per MPI rank memory allocation (min/avg/max) = 0.04702 | 0.04702 | 0.04702 Mbytes
30: Step Temp E_pair E_mol TotEng Press 
30:       10            0            0            0            0            0 
30:       20            0            0            0            0            0 
30: Loop time of 0.0026238 on 1 procs for 10 steps with 0 atoms
30: 
30: Performance: 1646466.956 tau/day, 3811.266 timesteps/s
30: 68.6% CPU use with 1 MPI tasks x 1 OpenMP threads
30: 
30: MPI task timing breakdown:
30: Section |  min time  |  avg time  |  max time  |%varavg| %total
30: ---------------------------------------------------------------
30: Pair    | 0          | 0          | 0          |   0.0 |  0.00
30: Neigh   | 0          | 0          | 0          |   0.0 |  0.00
30: Comm    | 0.0005089  | 0.0005089  | 0.0005089  |   0.0 | 19.40
30: Output  | 0.0007183  | 0.0007183  | 0.0007183  |   0.0 | 27.38
30: Modify  | 0.0004921  | 0.0004921  | 0.0004921  |   0.0 | 18.76
30: Other   |            | 0.0009045  |            |       | 34.47
30: 
30: Nlocal:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Nghost:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: Neighs:        0.00000 ave           0 max           0 min
30: Histogram: 1 0 0 0 0 0 0 0 0 0
30: 
30: Total # of neighbors = 0
30: Neighbor list builds = 0
30: Dangerous builds = 0
30: Total wall time: 0:00:00
30: ok
30: test_has_ffmpeg_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_has_gzip_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_has_id (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: fix charge all property/atom q ghost yes
30: region box block 0 1 0 1 0 1
30: create_box 1 box
30: Created orthogonal box = (0.0000000 0.0000000 0.0000000) to (1.0000000 1.0000000 1.0000000)
30:   1 by 1 by 1 MPI processor grid
30: group none empty
30: 0 atoms in group none
30: variable test index 1
30: Total wall time: 0:00:00
30: ok
30: test_has_jpeg_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_has_png_support (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_has_style (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_installed_packages (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_is_running (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: test_version (__main__.PythonCapabilities) ... LAMMPS (29 Oct 2020)
30: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
30:   using 1 OpenMP thread(s) per MPI task
30: Total wall time: 0:00:00
30: ok
30: 
30: ----------------------------------------------------------------------
30: Ran 12 tests in 4.600s
30: 
30: OK
29/31 Test #30: PythonCapabilities ...............   Passed    7.88 sec
31: test_create_atoms (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
31: Total wall time: 0:00:00
31: ok
31: test_runs (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
31: Total wall time: 0:00:00
31: ok
31: test_version (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
31: Total wall time: 0:00:00
31: ok
31: test_write_script (__main__.PythonPyLammps) ... LAMMPS (29 Oct 2020)
31: OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:94)
31:   using 1 OpenMP thread(s) per MPI task
31: LAMMPS output is captured by PyLammps wrapper
31: Total wall time: 0:00:00
31: ok
31: 
31: ----------------------------------------------------------------------
31: Ran 4 tests in 3.749s
31: 
31: OK
30/31 Test #31: PythonPyLammps ...................   Passed    6.16 sec
7: [       OK ] PairUnitConvertTest.tersoff_table (66803 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_zbl
7: [       OK ] PairUnitConvertTest.tersoff_zbl (206 ms)
7: [ RUN      ] PairUnitConvertTest.tersoff_zbl_omp
7: [       OK ] PairUnitConvertTest.tersoff_zbl_omp (137 ms)
7: [ RUN      ] PairUnitConvertTest.vashishta
7: [       OK ] PairUnitConvertTest.vashishta (124 ms)
7: [----------] 20 tests from PairUnitConvertTest (76895 ms total)
7: 
7: [----------] Global test environment tear-down
7: [==========] 20 tests from 1 test suite ran. (76902 ms total)
7: [  PASSED  ] 20 tests.
31/31 Test  #7: PairUnitConvert ..................   Passed   80.74 sec
100% tests passed, 0 tests failed out of 31
Total Test time (real) =  82.29 sec
+ cd -
/builddir/build/BUILD/lammps-patch_29Oct2020
+ test -n openmpi
+ module unload mpi/openmpi-riscv64
++ /usr/share/lmod/lmod/libexec/lmod sh unload mpi/openmpi-riscv64
+ eval unset '__LMOD_REF_COUNT_LD_LIBRARY_PATH;' unset 'LD_LIBRARY_PATH;' unset '__LMOD_REF_COUNT_LOADEDMODULES;' unset 'LOADEDMODULES;' '__LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1;' export '__LMOD_REF_COUNT_MANPATH;' 'MANPATH=/usr/share/lmod/lmod/share/man;' export 'MANPATH;' 'MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core;' export 'MODULEPATH;' unset 'MPI_BIN;' unset 'MPI_COMPILER;' unset 'MPI_FORTRAN_MOD_DIR;' unset 'MPI_HOME;' unset 'MPI_INCLUDE;' unset 'MPI_LIB;' unset 'MPI_MAN;' unset 'MPI_PYTHON3_SITEARCH;' unset 'MPI_SUFFIX;' unset 'MPI_SYSCONFIG;' '__LMOD_REF_COUNT_PATH=/usr/bin:1\;/bin:1\;/usr/sbin:1\;/sbin:1\;/usr/local/sbin:1;' export '__LMOD_REF_COUNT_PATH;' 'PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin;' export 'PATH;' '__LMOD_REF_COUNT_PKG_CONFIG_PATH=/usr/lib64/pkgconfig:1\;/usr/share/pkgconfig:1;' export '__LMOD_REF_COUNT_PKG_CONFIG_PATH;' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig;' export 'PKG_CONFIG_PATH;' unset '__LMOD_REF_COUNT__LMFILES_;' unset '_LMFILES_;' '_ModuleTable001_=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;' export '_ModuleTable001_;' '_ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=;' export '_ModuleTable002_;' '_ModuleTable_Sz_=2;' export '_ModuleTable_Sz_;'
++ unset __LMOD_REF_COUNT_LD_LIBRARY_PATH
++ unset LD_LIBRARY_PATH
++ unset __LMOD_REF_COUNT_LOADEDMODULES
++ unset LOADEDMODULES
++ __LMOD_REF_COUNT_MANPATH=/usr/share/lmod/lmod/share/man:1
++ export __LMOD_REF_COUNT_MANPATH
++ MANPATH=/usr/share/lmod/lmod/share/man
++ export MANPATH
++ MODULEPATH=/etc/modulefiles:/usr/share/modulefiles:/usr/share/modulefiles/Linux:/usr/share/modulefiles/Core:/usr/share/lmod/lmod/modulefiles/Core
++ export MODULEPATH
++ unset MPI_BIN
++ unset MPI_COMPILER
++ unset MPI_FORTRAN_MOD_DIR
++ unset MPI_HOME
++ unset MPI_INCLUDE
++ unset MPI_LIB
++ unset MPI_MAN
++ unset MPI_PYTHON3_SITEARCH
++ unset MPI_SUFFIX
++ unset MPI_SYSCONFIG
++ __LMOD_REF_COUNT_PATH='/usr/bin:1;/bin:1;/usr/sbin:1;/sbin:1;/usr/local/sbin:1'
++ export __LMOD_REF_COUNT_PATH
++ PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin
++ export PATH
++ __LMOD_REF_COUNT_PKG_CONFIG_PATH='/usr/lib64/pkgconfig:1;/usr/share/pkgconfig:1'
++ export __LMOD_REF_COUNT_PKG_CONFIG_PATH
++ PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig
++ export PKG_CONFIG_PATH
++ unset __LMOD_REF_COUNT__LMFILES_
++ unset _LMFILES_
++ _ModuleTable001_=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
++ export _ModuleTable001_
++ _ModuleTable002_=cmUvbG1vZC9sbW9kL21vZHVsZWZpbGVzL0NvcmUiLH0=
++ export _ModuleTable002_
++ _ModuleTable_Sz_=2
++ export _ModuleTable_Sz_
+ export PYTHONPATH=
+ PYTHONPATH=
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: lammps-20201029-1.fc33.riscv64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.RFWRc0
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_29Oct2020
+ DOCDIR=/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/doc/lammps
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/doc/lammps
+ cp -pr README /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/doc/lammps
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.2Cvae2
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_29Oct2020
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: lammps = 20201029-1.fc33 lammps(riscv-64) = 20201029-1.fc33 liblammps.so.0()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libfftw3.so.3()(64bit) libfftw3_omp.so.3()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgcc_s.so.1(GCC_4.5.0)(64bit) libgfortran.so.5()(64bit) libgfortran.so.5(GFORTRAN_10)(64bit) libgfortran.so.5(GFORTRAN_8)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libhdf5.so.103()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) libkim-api.so.2()(64bit) liblammps.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.27)(64bit) libpython3.9.so.1.0()(64bit) libreadline.so.8()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvoro++.so.0()(64bit) rtld(GNU_HASH)
Processing files: lammps-openmpi-20201029-1.fc33.riscv64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.yN4lSY
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_29Oct2020
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-openmpi
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-openmpi
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-openmpi
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: lammps-openmpi = 20201029-1.fc33 lammps-openmpi(riscv-64) = 20201029-1.fc33 liblammps_openmpi.so.0()(64bit)(openmpi-riscv64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libfftw3.so.3()(64bit) libfftw3_omp.so.3()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgcc_s.so.1(GCC_4.5.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libhdf5.so.103()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) libkim-api.so.2()(64bit) liblammps_openmpi.so.0()(64bit)(openmpi-riscv64) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libmpi.so.40()(64bit)(openmpi-riscv64) libmpi_cxx.so.40()(64bit)(openmpi-riscv64) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.27)(64bit) libpython3.9.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvoro++.so.0()(64bit) rtld(GNU_HASH)
Processing files: lammps-mpich-20201029-1.fc33.riscv64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.hBVtW0
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_29Oct2020
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-mpich
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-mpich
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-mpich
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: lammps-mpich = 20201029-1.fc33 lammps-mpich(riscv-64) = 20201029-1.fc33 liblammps_mpich.so.0()(64bit)(mpich-riscv64)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-riscv64-lp64d.so.1()(64bit) ld-linux-riscv64-lp64d.so.1(GLIBC_2.27)(64bit) libOpenCL.so.1()(64bit) libOpenCL.so.1(OPENCL_1.0)(64bit) libOpenCL.so.1(OPENCL_1.2)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.27)(64bit) libfftw3.so.3()(64bit) libfftw3_omp.so.3()(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libgcc_s.so.1(GCC_4.5.0)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(GOMP_4.5)(64bit) libgomp.so.1(OMP_1.0)(64bit) libhdf5.so.103()(64bit) libjpeg.so.62()(64bit) libjpeg.so.62(LIBJPEG_6.2)(64bit) libkim-api.so.2()(64bit) liblammps_mpich.so.0()(64bit)(mpich-riscv64) libm.so.6()(64bit) libm.so.6(GLIBC_2.27)(64bit) libmpi.so.12()(64bit)(mpich-riscv64) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.27)(64bit) libpython3.9.so.1.0()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libvoro++.so.0()(64bit) rtld(GNU_HASH)
Processing files: python3-lammps-20201029-1.fc33.riscv64
Provides: python-lammps = 20201029-1.fc33 python3-lammps = 20201029-1.fc33 python3-lammps(riscv-64) = 20201029-1.fc33 python3.9-lammps = 20201029-1.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: python(abi) = 3.9
Obsoletes: python-lammps < 20201029-1.fc33
Processing files: lammps-headers-20201029-1.fc33.riscv64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.MCAHE1
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_29Oct2020
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-headers
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-headers
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-headers
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: lammps-headers = 20201029-1.fc33 lammps-headers(riscv-64) = 20201029-1.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: lammps-devel-20201029-1.fc33.riscv64
Provides: cmake(LAMMPS) = 20201029 cmake(lammps) = 20201029 lammps-devel = 20201029-1.fc33 lammps-devel(riscv-64) = 20201029-1.fc33 pkgconfig(liblammps) = 20201029
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/pkg-config cmake-filesystem(riscv-64) liblammps.so.0()(64bit)
Processing files: lammps-mpich-devel-20201029-1.fc33.riscv64
Provides: lammps-mpich-devel = 20201029-1.fc33 lammps-mpich-devel(riscv-64) = 20201029-1.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: liblammps_mpich.so.0()(64bit)(mpich-riscv64)
Processing files: lammps-openmpi-devel-20201029-1.fc33.riscv64
Provides: lammps-openmpi-devel = 20201029-1.fc33 lammps-openmpi-devel(riscv-64) = 20201029-1.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: liblammps_openmpi.so.0()(64bit)(openmpi-riscv64)
Processing files: lammps-data-20201029-1.fc33.noarch
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.LEReL0
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_29Oct2020
+ LICENSEDIR=/builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-data
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-data
+ cp -pr LICENSE /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64/usr/share/licenses/lammps-data
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: application() application(lammps-shell.desktop) config(lammps-data) = 20201029-1.fc33 lammps-data = 20201029-1.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: lammps-debugsource-20201029-1.fc33.riscv64
Provides: lammps-debugsource = 20201029-1.fc33 lammps-debugsource(riscv-64) = 20201029-1.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: lammps-debuginfo-20201029-1.fc33.riscv64
Provides: debuginfo(build-id) = 0d93492368a3c08ea4387276015799c7b4ad8001 debuginfo(build-id) = 38c86cb036d72732d9be3435dd7f8a6e7312ef5f debuginfo(build-id) = 43235f2bb43ba50fa2b0f7c59b8c3dffbe1d96ba debuginfo(build-id) = 43269bd24524f159eb36f46781252241af33746f debuginfo(build-id) = 9e95a9e152c95a8f4ed8c3e31532839dc7baa04c debuginfo(build-id) = f037efacf8a7d6818aaeb26f3a6281d06a78ddad lammps-debuginfo = 20201029-1.fc33 lammps-debuginfo(riscv-64) = 20201029-1.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: lammps-debugsource(riscv-64) = 20201029-1.fc33
Processing files: lammps-openmpi-debuginfo-20201029-1.fc33.riscv64
Provides: debuginfo(build-id) = 56e3d4081bdc0711deeea8d4abe0bedf277e25dc debuginfo(build-id) = 6a5bacdbd474a3226a726b97e868bc18c644cec6 lammps-openmpi-debuginfo = 20201029-1.fc33 lammps-openmpi-debuginfo(riscv-64) = 20201029-1.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: lammps-debugsource(riscv-64) = 20201029-1.fc33
Processing files: lammps-mpich-debuginfo-20201029-1.fc33.riscv64
Provides: debuginfo(build-id) = 19d3463bb3b9bca97de69c4e32b3cc866851d683 debuginfo(build-id) = a0e3d776dfcaba968413b284a7c1401863306865 lammps-mpich-debuginfo = 20201029-1.fc33 lammps-mpich-debuginfo(riscv-64) = 20201029-1.fc33
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: lammps-debugsource(riscv-64) = 20201029-1.fc33
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64
Wrote: /builddir/build/RPMS/lammps-data-20201029-1.fc33.noarch.rpm
Wrote: /builddir/build/RPMS/lammps-debugsource-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-headers-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/python3-lammps-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-devel-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-devel-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-devel-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-mpich-debuginfo-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-debuginfo-20201029-1.fc33.riscv64.rpm
Wrote: /builddir/build/RPMS/lammps-openmpi-debuginfo-20201029-1.fc33.riscv64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.5LG4mY
+ umask 022
+ cd /builddir/build/BUILD
+ cd lammps-patch_29Oct2020
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/lammps-20201029-1.fc33.riscv64
+ RPM_EC=0
++ jobs -p
+ exit 0
Child return code was: 0